RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Fam19a3Q7TPG6 132 aa13.18□□□□□ -0.3
Upf1-201ENSMUST00000075666 Zfp462B1AWL2 2495 aaKnown RBP13.18□□□□□ -0.3
Upf1-201ENSMUST00000075666 Gm26661M0QWV4 156 aa13.18□□□□□ -0.3
Upf1-201ENSMUST00000075666 Chd7A2AJK6 2986 aaKnown RBP13.17□□□□□ -0.3
Upf1-201ENSMUST00000075666 Obox2E9PXV9 151 aa13.17□□□□□ -0.3
Upf1-201ENSMUST00000075666 Ube2aQ9Z255 152 aa13.17□□□□□ -0.3
Upf1-201ENSMUST00000075666 Ighv2-5A0A0A6YY69 116 aa13.17□□□□□ -0.3
Upf1-201ENSMUST00000075666 Abca12E9Q876 2595 aa13.16□□□□□ -0.3
Upf1-201ENSMUST00000075666 Igkv3-5A0A140T8M6 119 aa13.16□□□□□ -0.3
Upf1-201ENSMUST00000075666 Igkv1-110A0A0B4J1I0 119 aa13.16□□□□□ -0.3
Upf1-201ENSMUST00000075666 Igkv8-27A0A0G2JF28 120 aa13.16□□□□□ -0.3
Upf1-201ENSMUST00000075666 Igkv8-30A0A140T8M3 121 aa13.16□□□□□ -0.3
Upf1-201ENSMUST00000075666 H2al1bA0A087WP11 105 aa13.15□□□□□ -0.3
Upf1-201ENSMUST00000075666 P01819 144 aa13.14□□□□□ -0.31
Upf1-201ENSMUST00000075666 HttP42859 3119 aa13.14□□□□□ -0.31
Upf1-201ENSMUST00000075666 A0A286YE49 62 aa13.14□□□□□ -0.31
Upf1-201ENSMUST00000075666 PtprqP0C5E4 2300 aa13.13□□□□□ -0.31
Upf1-201ENSMUST00000075666 Ighv2-9A0A075B5Q5 116 aa13.12□□□□□ -0.31
Upf1-201ENSMUST00000075666 Gm43218A0A0G2JGT0 114 aa13.12□□□□□ -0.31
Upf1-201ENSMUST00000075666 Cep192E9Q4Y4 2514 aaKnown RBP13.11□□□□□ -0.31
Upf1-201ENSMUST00000075666 E130114P18RikF6S0S7 154 aa13.11□□□□□ -0.31
Upf1-201ENSMUST00000075666 CrygfQ9CXV3 174 aa13.11□□□□□ -0.31
Upf1-201ENSMUST00000075666 A530084C06RikQ3UTW2 186 aa13.11□□□□□ -0.31
Upf1-201ENSMUST00000075666 D730001G18RikA0A087WQU7 115 aa13.1□□□□□ -0.31
Upf1-201ENSMUST00000075666 TrrapQ80YV3 2565 aaKnown RBP13.1□□□□□ -0.31
Upf1-201ENSMUST00000075666 Coa6Q8BGD8 79 aa13.09□□□□□ -0.31
Upf1-201ENSMUST00000075666 Gm17509Q9CZ61 145 aa13.09□□□□□ -0.31
Upf1-201ENSMUST00000075666 Gm9767G3X930 207 aa13.09□□□□□ -0.31
Upf1-201ENSMUST00000075666 Spint4Q9D263 159 aa13.09□□□□□ -0.31
Upf1-201ENSMUST00000075666 Defb37Q7TMD2 62 aa13.08□□□□□ -0.31
Upf1-201ENSMUST00000075666 Gm10308Q9CVR5 141 aa13.08□□□□□ -0.31
Upf1-201ENSMUST00000075666 Gm9903Q8C9Y8 129 aa13.08□□□□□ -0.32
Upf1-201ENSMUST00000075666 Msrb1Q9JLC3 116 aa13.08□□□□□ -0.32
Upf1-201ENSMUST00000075666 Cd164Q9R0L9 197 aa13.08□□□□□ -0.32
Upf1-201ENSMUST00000075666 Col12a1Q60847 3120 aa13.08□□□□□ -0.32
Upf1-201ENSMUST00000075666 Srsf12Q8C8K3 266 aa13.08□□□□□ -0.32
Upf1-201ENSMUST00000075666 Gm7173A0A0G2JEB6 3132 aa13.07□□□□□ -0.32
Upf1-201ENSMUST00000075666 Map1aQ9QYR6 2776 aa13.07□□□□□ -0.32
Upf1-201ENSMUST00000075666 Ranbp2Q9ERU9 3053 aaKnown RBP13.07□□□□□ -0.32
Upf1-201ENSMUST00000075666 Myo18bE9PV66 2605 aa13.06□□□□□ -0.32
Upf1-201ENSMUST00000075666 Ndufs5Q99LY9 106 aa13.06□□□□□ -0.32
Upf1-201ENSMUST00000075666 Gm10197F6QEY5 67 aa13.06□□□□□ -0.32
Upf1-201ENSMUST00000075666 Wfdc13Q5DQQ6 81 aa13.05□□□□□ -0.32
Upf1-201ENSMUST00000075666 Igkv8-21A0A140T8P7 120 aa13.05□□□□□ -0.32
Upf1-201ENSMUST00000075666 1700012A03RikQ9DAF1 130 aa13.05□□□□□ -0.32
Upf1-201ENSMUST00000075666 Ighv2-2A0A075B5P8 116 aa13.04□□□□□ -0.32
Upf1-201ENSMUST00000075666 P01821 116 aa13.04□□□□□ -0.32
Upf1-201ENSMUST00000075666 1700074P13RikQ9D9G7 251 aa13.04□□□□□ -0.32
Upf1-201ENSMUST00000075666 H2al1eQ810S6 105 aa13.03□□□□□ -0.32
Upf1-201ENSMUST00000075666 Gm20604F8WIA3 75 aa13.02□□□□□ -0.32
Upf1-201ENSMUST00000075666 Gm10772F7AIG4 85 aa13.02□□□□□ -0.33
Upf1-201ENSMUST00000075666 Epg5Q80TA9 2572 aa13.01□□□□□ -0.33
Upf1-201ENSMUST00000075666 Igkv3-10A0A0G2JGN0 119 aa13.01□□□□□ -0.33
Upf1-201ENSMUST00000075666 2310034G01RikA0A286YDL3 209 aa13□□□□□ -0.33
Upf1-201ENSMUST00000075666 CrygeQ03740 174 aa13□□□□□ -0.33
Upf1-201ENSMUST00000075666 1810062G17RikG3X8Y2 129 aa12.99□□□□□ -0.33
Upf1-201ENSMUST00000075666 Ndufb1P0DN34 57 aa12.99□□□□□ -0.33
Upf1-201ENSMUST00000075666 6430550D23RikE9Q1X6 194 aa12.97□□□□□ -0.33
Upf1-201ENSMUST00000075666 Gm17689B3GLJ4 109 aa12.97□□□□□ -0.33
Upf1-201ENSMUST00000075666 Gm10267M0QWD8 85 aa12.97□□□□□ -0.33
Upf1-201ENSMUST00000075666 Ighv8-13A0A075B5Y0 101 aa12.97□□□□□ -0.33
Upf1-201ENSMUST00000075666 Defb50Q6TU36 73 aa12.97□□□□□ -0.33
Upf1-201ENSMUST00000075666 H2al1kJ3QP08 105 aa12.97□□□□□ -0.33
Upf1-201ENSMUST00000075666 H2al1mQ9DAD9 105 aa12.97□□□□□ -0.33
Upf1-201ENSMUST00000075666 Notch2O35516 2470 aa12.96□□□□□ -0.33
Upf1-201ENSMUST00000075666 Wfdc10Q3V2J9 124 aa12.96□□□□□ -0.33
Upf1-201ENSMUST00000075666 4930519P11RikQ9CUJ8 166 aa12.95□□□□□ -0.34
Upf1-201ENSMUST00000075666 Defb38Q7TNV7 63 aa12.94□□□□□ -0.34
Upf1-201ENSMUST00000075666 Bod1lE9Q6J5 3032 aa12.94□□□□□ -0.34
Upf1-201ENSMUST00000075666 Unc80Q8BLN6 3261 aa12.94□□□□□ -0.34
Upf1-201ENSMUST00000075666 Cox6a2P43023 97 aa12.94□□□□□ -0.34
Upf1-201ENSMUST00000075666 Defb2P82020 71 aa12.93□□□□□ -0.34
Upf1-201ENSMUST00000075666 Defb13Q8R2I4 64 aa12.93□□□□□ -0.34
Upf1-201ENSMUST00000075666 Nbeal1E9PYP2 2688 aa12.92□□□□□ -0.34
Upf1-201ENSMUST00000075666 Cdh23Q99PF4 3354 aa12.92□□□□□ -0.34
Upf1-201ENSMUST00000075666 Usp9yF8VPU6 2556 aa12.92□□□□□ -0.34
Upf1-201ENSMUST00000075666 Mrpl34Q99N91 92 aa12.92□□□□□ -0.34
Upf1-201ENSMUST00000075666 Gcn1E9PVA8 2671 aaKnown RBP12.92□□□□□ -0.34
Upf1-201ENSMUST00000075666 A730009L09RikA0A1B0GS82 72 aa12.91□□□□□ -0.34
Upf1-201ENSMUST00000075666 SycnQ8VCK7 134 aa12.9□□□□□ -0.34
Upf1-201ENSMUST00000075666 Elof1P60003 83 aa12.89□□□□□ -0.35
Upf1-201ENSMUST00000075666 Igkv3-4A0A140T8Q4 119 aa12.88□□□□□ -0.35
Upf1-201ENSMUST00000075666 Gm10770F7D043 238 aa12.87□□□□□ -0.35
Upf1-201ENSMUST00000075666 Vps13aQ5H8C4 3166 aa12.87□□□□□ -0.35
Upf1-201ENSMUST00000075666 Reg3aO09037 175 aa12.86□□□□□ -0.35
Upf1-201ENSMUST00000075666 Psors1c2Q80ZC9 134 aa12.84□□□□□ -0.35
Upf1-201ENSMUST00000075666 Unc79Q0KK59 2596 aa12.84□□□□□ -0.35
Upf1-201ENSMUST00000075666 C130032M10RikQ8C888 123 aa12.82□□□□□ -0.36
Upf1-201ENSMUST00000075666 Sec61gP60060 68 aa12.81□□□□□ -0.36
Upf1-201ENSMUST00000075666 Gm16485Q8C4B7 115 aa12.81□□□□□ -0.36
Upf1-201ENSMUST00000075666 Gm44790A0A0N4SV91 103 aa12.81□□□□□ -0.36
Upf1-201ENSMUST00000075666 Igkv3-3A0A140T8Q0 119 aa12.79□□□□□ -0.36
Upf1-201ENSMUST00000075666 Gm28230A0A0A0MQ91 144 aa12.79□□□□□ -0.36
Upf1-201ENSMUST00000075666 Gm21886J3QJU9 214 aa12.79□□□□□ -0.36
Upf1-201ENSMUST00000075666 Q8K1L6 76 aa12.77□□□□□ -0.36
Upf1-201ENSMUST00000075666 Cdc42se1Q8BHL7 80 aa12.76□□□□□ -0.37
Upf1-201ENSMUST00000075666 1700018G05RikA0A1B0GSI2 66 aa12.76□□□□□ -0.37
Upf1-201ENSMUST00000075666 Gm5617Q91VN2 117 aa12.76□□□□□ -0.37
Upf1-201ENSMUST00000075666 Igkv8-28A0A0G2JE47 121 aa12.76□□□□□ -0.37
Upf1-201ENSMUST00000075666 Lypd5Q9D7Z7 256 aa12.76□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 66 ms