RNA–Protein interactions for RNA: ENSMUST00000075084.4

Trim58-201, Transcript of E3 ubiquitin-protein ligase TRIM58, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim58, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58-201ENSMUST00000075084 Gm10767Q3TQP0 103 aa12.4□□□□□ -0.42
Trim58-201ENSMUST00000075084 Trav13-2A0A075B649 110 aa12.39□□□□□ -0.43
Trim58-201ENSMUST00000075084 Gm867A0A1W2P7T4 151 aa12.39□□□□□ -0.43
Trim58-201ENSMUST00000075084 P01896 185 aa12.39□□□□□ -0.43
Trim58-201ENSMUST00000075084 E130208F15RikQ3UPV3 143 aa12.39□□□□□ -0.43
Trim58-201ENSMUST00000075084 Igkv8-24A0A140T8P5 121 aa12.39□□□□□ -0.43
Trim58-201ENSMUST00000075084 Gm3618D3Z4P5 127 aa12.39□□□□□ -0.43
Trim58-201ENSMUST00000075084 Gm2916Q9D9B9 127 aa12.39□□□□□ -0.43
Trim58-201ENSMUST00000075084 Defb29Q8BGW9 78 aa12.38□□□□□ -0.43
Trim58-201ENSMUST00000075084 Reg3bP35230 175 aa12.36□□□□□ -0.43
Trim58-201ENSMUST00000075084 Tcl1b3P56842 122 aa12.36□□□□□ -0.43
Trim58-201ENSMUST00000075084 Ighv13-2A0A0A6YWN3 119 aa12.36□□□□□ -0.43
Trim58-201ENSMUST00000075084 MifP34884 115 aaKnown RBP12.36□□□□□ -0.43
Trim58-201ENSMUST00000075084 B9d2Q3UK10 175 aa12.36□□□□□ -0.43
Trim58-201ENSMUST00000075084 AplnQ9R0R4 77 aa12.36□□□□□ -0.43
Trim58-201ENSMUST00000075084 Gm16181B0V2H2 73 aa12.35□□□□□ -0.43
Trim58-201ENSMUST00000075084 Igkv8-18A0A0B4J1J3 123 aa12.34□□□□□ -0.43
Trim58-201ENSMUST00000075084 TeppQ6IMH0 216 aa12.34□□□□□ -0.43
Trim58-201ENSMUST00000075084 Igkv1-35A0A0G2JDE5 120 aa12.33□□□□□ -0.44
Trim58-201ENSMUST00000075084 Gm16381A0A1Y7VKT9 73 aa12.33□□□□□ -0.44
Trim58-201ENSMUST00000075084 Tcl1b5P56845 121 aa12.33□□□□□ -0.44
Trim58-201ENSMUST00000075084 Megf8P60882 2789 aa12.32□□□□□ -0.44
Trim58-201ENSMUST00000075084 Ighv2-9A0A075B5Q5 116 aa12.32□□□□□ -0.44
Trim58-201ENSMUST00000075084 Igkv8-16A0A0G2JDG9 121 aa12.32□□□□□ -0.44
Trim58-201ENSMUST00000075084 Gm5153P01627 120 aa12.32□□□□□ -0.44
Trim58-201ENSMUST00000075084 Xlr5cQ9JJR2 179 aa12.32□□□□□ -0.44
Trim58-201ENSMUST00000075084 Pkd1l1Q8R526 2615 aa12.32□□□□□ -0.44
Trim58-201ENSMUST00000075084 Gm10518F6UQQ9 182 aa12.32□□□□□ -0.44
Trim58-201ENSMUST00000075084 4930524J08RikQ9CUJ5 163 aa12.32□□□□□ -0.44
Trim58-201ENSMUST00000075084 Dnal4Q9DCM4 105 aa12.32□□□□□ -0.44
Trim58-201ENSMUST00000075084 Wfdc12Q9JHY3 85 aa12.32□□□□□ -0.44
Trim58-201ENSMUST00000075084 Trav13n-2A0A0G2JF93 110 aa12.31□□□□□ -0.44
Trim58-201ENSMUST00000075084 1810062G17RikG3X8Y2 129 aa12.31□□□□□ -0.44
Trim58-201ENSMUST00000075084 Smim26Q3V460 107 aa12.31□□□□□ -0.44
Trim58-201ENSMUST00000075084 Dppa2Q9CWH0 301 aa12.31□□□□□ -0.44
Trim58-201ENSMUST00000075084 4930556J24RikQ9D4U7 146 aa12.31□□□□□ -0.44
Trim58-201ENSMUST00000075084 1700020N15RikL7MTX3 112 aa12.3□□□□□ -0.44
Trim58-201ENSMUST00000075084 Gm5142Q8C5X9 133 aa12.3□□□□□ -0.44
Trim58-201ENSMUST00000075084 Gm9903Q8C9Y8 129 aa12.3□□□□□ -0.44
Trim58-201ENSMUST00000075084 Gm10845Q3UNY9 185 aa12.29□□□□□ -0.44
Trim58-201ENSMUST00000075084 Defa2P28309 93 aa12.29□□□□□ -0.44
Trim58-201ENSMUST00000075084 Csdc2Q91YQ3 154 aa12.28□□□□□ -0.44
Trim58-201ENSMUST00000075084 Reg3dQ9QUS9 175 aa12.28□□□□□ -0.44
Trim58-201ENSMUST00000075084 Gm4707V9GXN5 68 aa12.28□□□□□ -0.44
Trim58-201ENSMUST00000075084 Sslp1Q3UN54 99 aa12.27□□□□□ -0.45
Trim58-201ENSMUST00000075084 Cox7bP56393 80 aa12.26□□□□□ -0.45
Trim58-201ENSMUST00000075084 Acyp1P56376 99 aa12.26□□□□□ -0.45
Trim58-201ENSMUST00000075084 5730596B20RikQ8BQ08 205 aa12.26□□□□□ -0.45
Trim58-201ENSMUST00000075084 Gm17509Q9CZ61 145 aa12.26□□□□□ -0.45
Trim58-201ENSMUST00000075084 P01819 144 aa12.25□□□□□ -0.45
Trim58-201ENSMUST00000075084 Cox7b2Q9D2H1 82 aa12.24□□□□□ -0.45
Trim58-201ENSMUST00000075084 Muc6Q80T03 2850 aa12.24□□□□□ -0.45
Trim58-201ENSMUST00000075084 Trav3-4A0A075B654 114 aa12.23□□□□□ -0.45
Trim58-201ENSMUST00000075084 Gm17349F7BGH6 99 aa12.23□□□□□ -0.45
Trim58-201ENSMUST00000075084 Dnah17Q69Z23 4481 aa12.23□□□□□ -0.45
Trim58-201ENSMUST00000075084 A730009L09RikA0A1B0GS82 72 aa12.22□□□□□ -0.45
Trim58-201ENSMUST00000075084 Ube2d4D3YUH6 135 aa12.22□□□□□ -0.45
Trim58-201ENSMUST00000075084 Igkv4-92A0A0B4J1I2 117 aa12.21□□□□□ -0.45
Trim58-201ENSMUST00000075084 CnbpP53996 178 aaKnown RBP12.21□□□□□ -0.45
Trim58-201ENSMUST00000075084 Rpl39lQ9CQD0 51 aa12.21□□□□□ -0.45
Trim58-201ENSMUST00000075084 9430015G10RikA2ASP7 199 aa12.2□□□□□ -0.46
Trim58-201ENSMUST00000075084 Csmd3Q80T79 3707 aa12.2□□□□□ -0.46
Trim58-201ENSMUST00000075084 Defa20Q45VN2 95 aa12.2□□□□□ -0.46
Trim58-201ENSMUST00000075084 Gm5617Q91VN2 117 aa12.19□□□□□ -0.46
Trim58-201ENSMUST00000075084 Defb11Q8R2I7 77 aa12.19□□□□□ -0.46
Trim58-201ENSMUST00000075084 Ufsp1Q9CZP0 217 aa12.19□□□□□ -0.46
Trim58-201ENSMUST00000075084 Lyrm7Q9DA03 104 aa12.19□□□□□ -0.46
Trim58-201ENSMUST00000075084 Huwe1Q7TMY8 4377 aaKnown RBP12.18□□□□□ -0.46
Trim58-201ENSMUST00000075084 A0A286YCN5 57 aa12.18□□□□□ -0.46
Trim58-201ENSMUST00000075084 Rpl18aP62717 176 aaKnown RBP12.18□□□□□ -0.46
Trim58-201ENSMUST00000075084 Klk12B2RVZ0 247 aa12.18□□□□□ -0.46
Trim58-201ENSMUST00000075084 Hbb-b2P02089 147 aa12.18□□□□□ -0.46
Trim58-201ENSMUST00000075084 AY074887Q8R5F9 132 aa12.18□□□□□ -0.46
Trim58-201ENSMUST00000075084 FasnP19096 2504 aaKnown RBP12.17□□□□□ -0.46
Trim58-201ENSMUST00000075084 Gm9805F6YK59 57 aa12.16□□□□□ -0.46
Trim58-201ENSMUST00000075084 Sprr4Q8CGN8 76 aa12.16□□□□□ -0.46
Trim58-201ENSMUST00000075084 Znf414Q9DCK4 299 aa12.16□□□□□ -0.46
Trim58-201ENSMUST00000075084 Tenm2Q9WTS5 2764 aa12.15□□□□□ -0.46
Trim58-201ENSMUST00000075084 Camk2n2Q78WH7 79 aa12.15□□□□□ -0.47
Trim58-201ENSMUST00000075084 Spata45Q9CVW4 97 aa12.14□□□□□ -0.47
Trim58-201ENSMUST00000075084 Trav14d-3-dv8A0A075B619 120 aa12.13□□□□□ -0.47
Trim58-201ENSMUST00000075084 Gm10320E9PW43 113 aa12.13□□□□□ -0.47
Trim58-201ENSMUST00000075084 Xcl1P47993 114 aa12.13□□□□□ -0.47
Trim58-201ENSMUST00000075084 Dnah7bL7N1Y0 4068 aa12.13□□□□□ -0.47
Trim58-201ENSMUST00000075084 Gm16485Q8C4B7 115 aa12.13□□□□□ -0.47
Trim58-201ENSMUST00000075084 Trav14-1A0A0G2JF94 121 aa12.12□□□□□ -0.47
Trim58-201ENSMUST00000075084 Mrpl52Q9D0Y8 121 aa12.11□□□□□ -0.47
Trim58-201ENSMUST00000075084 Igkv4-58A0A0G2JGI6 119 aa12.1□□□□□ -0.47
Trim58-201ENSMUST00000075084 Gm10770F7D043 238 aa12.1□□□□□ -0.47
Trim58-201ENSMUST00000075084 Gm17577J3QNF7 156 aa12.1□□□□□ -0.47
Trim58-201ENSMUST00000075084 Anapc13Q8R034 74 aa12.1□□□□□ -0.47
Trim58-201ENSMUST00000075084 Dnah1E9Q8T7 4250 aa12.1□□□□□ -0.47
Trim58-201ENSMUST00000075084 Ifitm6A0A1B0GS75 124 aa12.09□□□□□ -0.47
Trim58-201ENSMUST00000075084 Gm10251J3QPM5 127 aa12.09□□□□□ -0.47
Trim58-201ENSMUST00000075084 Gm7102J3QQ10 178 aa12.09□□□□□ -0.47
Trim58-201ENSMUST00000075084 Igkv2-109A0A075B5K6 120 aa12.08□□□□□ -0.48
Trim58-201ENSMUST00000075084 Stab2Q8R4U0 2559 aa12.08□□□□□ -0.48
Trim58-201ENSMUST00000075084 Ighv10-1A0A0B4J1J6 119 aa12.08□□□□□ -0.48
Trim58-201ENSMUST00000075084 Igkv1-88A0A140T8N1 120 aa12.07□□□□□ -0.48
Trim58-201ENSMUST00000075084 Tmem213Q08EA8 116 aa12.07□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 41.4 ms