RNA–Protein interactions for RNA: ENSMUST00000075084.4

Trim58-201, Transcript of E3 ubiquitin-protein ligase TRIM58, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim58, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58-201ENSMUST00000075084 Gm35339A0A140LHH9 1649 aa37.17■■■■□ 3.54
Trim58-201ENSMUST00000075084 NischQ80TM9 1593 aa37.17■■■■□ 3.54
Trim58-201ENSMUST00000075084 Abcc9P70170 1546 aa36.04■■■■□ 3.36
Trim58-201ENSMUST00000075084 Abcc8B2RUS7 1588 aa35.66■■■■□ 3.3
Trim58-201ENSMUST00000075084 ScribQ80U72 1612 aa33.87■■■■□ 3.01
Trim58-201ENSMUST00000075084 Rhox8Q6VSS7 320 aa33.64■■■□□ 2.98
Trim58-201ENSMUST00000075084 Dcaf1Q80TR8 1506 aa33.04■■■□□ 2.88
Trim58-201ENSMUST00000075084 Rtl1Q7M732 1744 aa32.99■■■□□ 2.87
Trim58-201ENSMUST00000075084 Kdm5dQ62240 1548 aa32.96■■■□□ 2.87
Trim58-201ENSMUST00000075084 NacadQ5SWP3 1504 aa32.88■■■□□ 2.85
Trim58-201ENSMUST00000075084 Rb1cc1Q9ESK9 1588 aa32.47■■■□□ 2.79
Trim58-201ENSMUST00000075084 Ccdc180J3QNE4 1664 aa32.26■■■□□ 2.76
Trim58-201ENSMUST00000075084 Sycp2Q9CUU3 1500 aa32.21■■■□□ 2.75
Trim58-201ENSMUST00000075084 Baz1aO88379 1555 aa32.06■■■□□ 2.72
Trim58-201ENSMUST00000075084 Zcchc6Q5BLK4 1491 aaKnown RBP31.9■■■□□ 2.7
Trim58-201ENSMUST00000075084 Crybg2B7ZCC2 1516 aa31.75■■■□□ 2.67
Trim58-201ENSMUST00000075084 BicraF8VPZ9 1578 aa31.64■■■□□ 2.66
Trim58-201ENSMUST00000075084 Ccdc136Q3TVA9 1136 aa31.24■■■□□ 2.59
Trim58-201ENSMUST00000075084 Smarca2Q6DIC0 1577 aa31.23■■■□□ 2.59
Trim58-201ENSMUST00000075084 Cecr2E9Q2Z1 1453 aa30.82■■■□□ 2.52
Trim58-201ENSMUST00000075084 HrcG5E8J6 738 aa30.74■■■□□ 2.51
Trim58-201ENSMUST00000075084 Trim41Q5NCC3 630 aa30.67■■■□□ 2.5
Trim58-201ENSMUST00000075084 Smarca4Q3TKT4 1613 aaKnown RBP30.54■■■□□ 2.48
Trim58-201ENSMUST00000075084 Pds5bQ4VA53 1446 aaKnown RBP30.51■■■□□ 2.47
Trim58-201ENSMUST00000075084 Atad2bE9Q166 1460 aaKnown RBP30.43■■■□□ 2.46
Trim58-201ENSMUST00000075084 Brd4Q9ESU6 1400 aaKnown RBP30.39■■■□□ 2.46
Trim58-201ENSMUST00000075084 Synj1Q8CHC4 1574 aa30.29■■■□□ 2.44
Trim58-201ENSMUST00000075084 Iqgap2Q3UQ44 1575 aa30.26■■■□□ 2.43
Trim58-201ENSMUST00000075084 CftrP26361 1476 aa30.25■■■□□ 2.43
Trim58-201ENSMUST00000075084 Cttnbp2B9EJA2 1648 aa30.14■■■□□ 2.42
Trim58-201ENSMUST00000075084 Cep164Q5DU05 1446 aa30.01■■■□□ 2.39
Trim58-201ENSMUST00000075084 Cngb1E1AZ71 1325 aa29.94■■■□□ 2.38
Trim58-201ENSMUST00000075084 Golga3P55937 1487 aa29.93■■■□□ 2.38
Trim58-201ENSMUST00000075084 Thoc2B1AZI6 1594 aaKnown RBP29.92■■■□□ 2.38
Trim58-201ENSMUST00000075084 Ercc6F8VPZ5 1481 aa29.9■■■□□ 2.38
Trim58-201ENSMUST00000075084 Wdr62Q3U3T8 1523 aa29.85■■■□□ 2.37
Trim58-201ENSMUST00000075084 Frmpd1A2AKB4 1549 aa29.84■■■□□ 2.37
Trim58-201ENSMUST00000075084 Esf1Q3V1V3 845 aaKnown RBP29.82■■■□□ 2.36
Trim58-201ENSMUST00000075084 Rsf1E9PWW9 1441 aaKnown RBP29.79■■■□□ 2.36
Trim58-201ENSMUST00000075084 Chic1Q8CBW7 227 aa29.7■■■□□ 2.35
Trim58-201ENSMUST00000075084 Top2bQ64511 1612 aa29.69■■■□□ 2.34
Trim58-201ENSMUST00000075084 Ccdc88bQ4QRL3 1481 aa29.66■■■□□ 2.34
Trim58-201ENSMUST00000075084 Dnajc5bQ9CQ94 199 aa29.53■■■□□ 2.32
Trim58-201ENSMUST00000075084 Cc2d2aQ8CFW7 1633 aa29.52■■■□□ 2.32
Trim58-201ENSMUST00000075084 Ehmt2Q9Z148 1263 aaKnown RBP29.51■■■□□ 2.31
Trim58-201ENSMUST00000075084 Rpgrip1Q9EPQ2 1331 aa29.49■■■□□ 2.31
Trim58-201ENSMUST00000075084 Unc13aQ4KUS2 1712 aa29.46■■■□□ 2.31
Trim58-201ENSMUST00000075084 Phldb1Q6PDH0 1371 aaKnown RBP29.43■■■□□ 2.3
Trim58-201ENSMUST00000075084 Fam135aQ6NS59 1506 aa29.42■■■□□ 2.3
Trim58-201ENSMUST00000075084 Acin1Q9JIX8 1338 aaKnown RBP29.34■■■□□ 2.29
Trim58-201ENSMUST00000075084 Gab3Q8BSM5 595 aa29.34■■■□□ 2.29
Trim58-201ENSMUST00000075084 Fmn1Q05860 1466 aa29.22■■■□□ 2.27
Trim58-201ENSMUST00000075084 Ubl4bQ9CQ84 188 aa29.18■■■□□ 2.26
Trim58-201ENSMUST00000075084 Lamc3Q9R0B6 1581 aa29.11■■■□□ 2.25
Trim58-201ENSMUST00000075084 Kif15Q6P9L6 1387 aa29.1■■■□□ 2.25
Trim58-201ENSMUST00000075084 TnnQ80Z71 1560 aa29.06■■■□□ 2.24
Trim58-201ENSMUST00000075084 Top2aQ01320 1528 aaKnown RBP29.04■■■□□ 2.24
Trim58-201ENSMUST00000075084 Baz1bQ9Z277 1479 aa28.98■■■□□ 2.23
Trim58-201ENSMUST00000075084 Rapgef2Q8CHG7 1496 aa28.88■■■□□ 2.21
Trim58-201ENSMUST00000075084 Cux2P70298 1426 aa28.86■■■□□ 2.21
Trim58-201ENSMUST00000075084 Mrc2Q64449 1479 aa28.77■■■□□ 2.2
Trim58-201ENSMUST00000075084 Camsap1A2AHC3 1581 aa28.72■■■□□ 2.19
Trim58-201ENSMUST00000075084 Il27Q8K3I6 234 aa28.69■■■□□ 2.18
Trim58-201ENSMUST00000075084 Ccdc18Q640L5 1455 aa28.69■■■□□ 2.18
Trim58-201ENSMUST00000075084 Cep162Q6ZQ06 1403 aa28.63■■■□□ 2.17
Trim58-201ENSMUST00000075084 Npm1Q61937 292 aaKnown RBP28.62■■■□□ 2.17
Trim58-201ENSMUST00000075084 Eif4g1Q6NZJ6 1600 aaKnown RBP28.49■■■□□ 2.15
Trim58-201ENSMUST00000075084 Npm2Q80W85 207 aa28.47■■■□□ 2.15
Trim58-201ENSMUST00000075084 LrpprcQ6PB66 1392 aaKnown RBP28.43■■■□□ 2.14
Trim58-201ENSMUST00000075084 Grin2bQ01097 1482 aa28.43■■■□□ 2.14
Trim58-201ENSMUST00000075084 Kif21aQ9QXL2 1672 aa28.42■■■□□ 2.14
Trim58-201ENSMUST00000075084 Myt1lP97500 1187 aa28.4■■■□□ 2.14
Trim58-201ENSMUST00000075084 PtprkP35822 1457 aa28.34■■■□□ 2.13
Trim58-201ENSMUST00000075084 NrkQ9R0G8 1455 aa28.33■■■□□ 2.13
Trim58-201ENSMUST00000075084 Dhx29Q6PGC1 1365 aaKnown RBP28.33■■■□□ 2.13
Trim58-201ENSMUST00000075084 PogzQ8BZH4 1409 aaKnown RBP28.32■■■□□ 2.12
Trim58-201ENSMUST00000075084 Arhgap35Q91YM2 1499 aa28.27■■■□□ 2.12
Trim58-201ENSMUST00000075084 Shroom4Q1W617 1475 aa28.25■■■□□ 2.11
Trim58-201ENSMUST00000075084 Duox2A2AQ99 1517 aa28.23■■■□□ 2.11
Trim58-201ENSMUST00000075084 Mier1Q5UAK0 511 aa28.18■■■□□ 2.1
Trim58-201ENSMUST00000075084 Efcab5A0JP43 1406 aa28.18■■■□□ 2.1
Trim58-201ENSMUST00000075084 Crocc2F6XLV1 1638 aa28.16■■■□□ 2.1
Trim58-201ENSMUST00000075084 Clip1Q922J3 1391 aa28.11■■■□□ 2.09
Trim58-201ENSMUST00000075084 Lrriq1Q0P5X1 1673 aa28.08■■■□□ 2.09
Trim58-201ENSMUST00000075084 Map3k1P53349 1493 aa28.07■■■□□ 2.08
Trim58-201ENSMUST00000075084 Plb1Q3TTY0 1478 aa28.06■■■□□ 2.08
Trim58-201ENSMUST00000075084 UbtfP25976 765 aaKnown RBP28.04■■■□□ 2.08
Trim58-201ENSMUST00000075084 Samd9lQ69Z37 1561 aa28.03■■■□□ 2.08
Trim58-201ENSMUST00000075084 Urb2E9Q7L1 1524 aaKnown RBP28.03■■■□□ 2.08
Trim58-201ENSMUST00000075084 NefmP08553 848 aa27.96■■■□□ 2.07
Trim58-201ENSMUST00000075084 Mroh2bQ7M6Y6 1581 aa27.96■■■□□ 2.07
Trim58-201ENSMUST00000075084 Zeb1Q64318 1117 aa27.93■■■□□ 2.06
Trim58-201ENSMUST00000075084 Eea1Q8BL66 1411 aa27.91■■■□□ 2.06
Trim58-201ENSMUST00000075084 Arap1Q4LDD4 1452 aa27.87■■■□□ 2.05
Trim58-201ENSMUST00000075084 Plekhg3Q4VAC9 1341 aa27.85■■■□□ 2.05
Trim58-201ENSMUST00000075084 Rad54l2Q99NG0 1466 aa27.85■■■□□ 2.05
Trim58-201ENSMUST00000075084 AqrQ8CFQ3 1481 aaKnown RBP27.82■■■□□ 2.04
Trim58-201ENSMUST00000075084 SynmQ70IV5 1561 aa27.82■■■□□ 2.04
Trim58-201ENSMUST00000075084 Ift140E9PY46 1464 aa27.81■■■□□ 2.04
Trim58-201ENSMUST00000075084 Disp1Q3TDN0 1521 aa27.8■■■□□ 2.04
Retrieved 100 of 22,080 RNA–protein pairs in 53.9 ms