RNA–Protein interactions for RNA: ENSMUST00000042724.7

Usp38-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp38, Length 4,707 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp38-201ENSMUST00000042724 ScxQ64124 207 aa10.6□□□□□ -0.71
Usp38-201ENSMUST00000042724 Gm20604F8WIA3 75 aa10.6□□□□□ -0.71
Usp38-201ENSMUST00000042724 P06320 134 aa10.59□□□□□ -0.71
Usp38-201ENSMUST00000042724 MobpQ9D2P8 170 aa10.59□□□□□ -0.71
Usp38-201ENSMUST00000042724 Tmem258P61166 79 aa10.59□□□□□ -0.71
Usp38-201ENSMUST00000042724 Defb45Q3V490 66 aa10.59□□□□□ -0.71
Usp38-201ENSMUST00000042724 Gm11565A2A4M7 156 aa10.58□□□□□ -0.72
Usp38-201ENSMUST00000042724 Gm10845Q3UNY9 185 aa10.58□□□□□ -0.72
Usp38-201ENSMUST00000042724 Spink8Q09TK9 105 aa10.58□□□□□ -0.72
Usp38-201ENSMUST00000042724 Gm9887F6RFI0 207 aa10.58□□□□□ -0.72
Usp38-201ENSMUST00000042724 Znf706Q9D115 76 aaKnown RBP10.58□□□□□ -0.72
Usp38-201ENSMUST00000042724 Defb12Q8K4N3 78 aa10.57□□□□□ -0.72
Usp38-201ENSMUST00000042724 Igkv8-21A0A140T8P7 120 aa10.56□□□□□ -0.72
Usp38-201ENSMUST00000042724 Wfdc13Q5DQQ6 81 aa10.55□□□□□ -0.72
Usp38-201ENSMUST00000042724 Ighv10-3A0A075B5T6 119 aa10.54□□□□□ -0.72
Usp38-201ENSMUST00000042724 Igkv3-3A0A140T8Q0 119 aa10.54□□□□□ -0.72
Usp38-201ENSMUST00000042724 CicQ924A2 2510 aa10.54□□□□□ -0.72
Usp38-201ENSMUST00000042724 Brk1Q91VR8 75 aa10.54□□□□□ -0.72
Usp38-201ENSMUST00000042724 TeppQ6IMH0 216 aa10.54□□□□□ -0.72
Usp38-201ENSMUST00000042724 Jbts17Q8CE72 3214 aa10.53□□□□□ -0.72
Usp38-201ENSMUST00000042724 Usp9yF8VPU6 2556 aa10.53□□□□□ -0.72
Usp38-201ENSMUST00000042724 BaalcQ8VHV1 145 aa10.52□□□□□ -0.72
Usp38-201ENSMUST00000042724 FlnaQ8BTM8 2647 aaKnown RBP10.52□□□□□ -0.73
Usp38-201ENSMUST00000042724 Smim20D3Z7Q2 69 aa10.52□□□□□ -0.73
Usp38-201ENSMUST00000042724 Psors1c2Q80ZC9 134 aa10.52□□□□□ -0.73
Usp38-201ENSMUST00000042724 Defb40Q70KL2 73 aa10.52□□□□□ -0.73
Usp38-201ENSMUST00000042724 Igkv1-117A0A140T8M0 119 aa10.52□□□□□ -0.73
Usp38-201ENSMUST00000042724 Defb13Q8R2I4 64 aa10.52□□□□□ -0.73
Usp38-201ENSMUST00000042724 Mrpl52Q9D0Y8 121 aa10.51□□□□□ -0.73
Usp38-201ENSMUST00000042724 Ntn5Q3UQ22 452 aa10.5□□□□□ -0.73
Usp38-201ENSMUST00000042724 Defb11Q8R2I7 77 aa10.5□□□□□ -0.73
Usp38-201ENSMUST00000042724 Rev3lQ61493 3122 aa10.5□□□□□ -0.73
Usp38-201ENSMUST00000042724 Ifitm6A0A1B0GS75 124 aa10.5□□□□□ -0.73
Usp38-201ENSMUST00000042724 Ighv1-56A0A0A6YXG2 117 aa10.5□□□□□ -0.73
Usp38-201ENSMUST00000042724 E130208F15RikQ3UPV3 143 aa10.49□□□□□ -0.73
Usp38-201ENSMUST00000042724 Sprr2jO70561 109 aa10.49□□□□□ -0.73
Usp38-201ENSMUST00000042724 Serp2Q6TAW2 65 aa10.48□□□□□ -0.73
Usp38-201ENSMUST00000042724 Gm28539A0A087WSL9 92 aa10.48□□□□□ -0.73
Usp38-201ENSMUST00000042724 Gcn1E9PVA8 2671 aaKnown RBP10.48□□□□□ -0.73
Usp38-201ENSMUST00000042724 A730009L09RikA0A1B0GS82 72 aa10.47□□□□□ -0.73
Usp38-201ENSMUST00000042724 Gm10772F7AIG4 85 aa10.47□□□□□ -0.73
Usp38-201ENSMUST00000042724 Igkv1-110A0A0B4J1I0 119 aa10.46□□□□□ -0.74
Usp38-201ENSMUST00000042724 Vpreb2P13373 142 aa10.46□□□□□ -0.74
Usp38-201ENSMUST00000042724 Sostdc1Q9CQN4 206 aa10.46□□□□□ -0.74
Usp38-201ENSMUST00000042724 AtrQ9JKK8 2635 aa10.46□□□□□ -0.74
Usp38-201ENSMUST00000042724 Lelp1Q9DAE3 120 aa10.45□□□□□ -0.74
Usp38-201ENSMUST00000042724 Lypd5Q9D7Z7 256 aa10.44□□□□□ -0.74
Usp38-201ENSMUST00000042724 Snhg11Q4G0K9 87 aa10.44□□□□□ -0.74
Usp38-201ENSMUST00000042724 1600014C23RikQ9DAX4 101 aa10.44□□□□□ -0.74
Usp38-201ENSMUST00000042724 Adm2Q7TNK8 150 aa10.43□□□□□ -0.74
Usp38-201ENSMUST00000042724 Cd164Q9R0L9 197 aa10.43□□□□□ -0.74
Usp38-201ENSMUST00000042724 Q9DAA7 145 aa10.42□□□□□ -0.74
Usp38-201ENSMUST00000042724 Igkv3-12A0A140T8P0 119 aa10.41□□□□□ -0.74
Usp38-201ENSMUST00000042724 Gm11627A6PWP4 55 aa10.4□□□□□ -0.74
Usp38-201ENSMUST00000042724 4930519P11RikQ9CUJ8 166 aa10.4□□□□□ -0.74
Usp38-201ENSMUST00000042724 Gm9195A0A140LHT4 2805 aa10.4□□□□□ -0.74
Usp38-201ENSMUST00000042724 Gm28374F6SG70 93 aa10.4□□□□□ -0.75
Usp38-201ENSMUST00000042724 P01819 144 aa10.4□□□□□ -0.75
Usp38-201ENSMUST00000042724 Gm9903Q8C9Y8 129 aa10.39□□□□□ -0.75
Usp38-201ENSMUST00000042724 Atox1O08997 68 aaKnown RBP10.39□□□□□ -0.75
Usp38-201ENSMUST00000042724 Csdc2Q91YQ3 154 aa10.39□□□□□ -0.75
Usp38-201ENSMUST00000042724 Map1aQ9QYR6 2776 aa10.38□□□□□ -0.75
Usp38-201ENSMUST00000042724 Cdh23Q99PF4 3354 aa10.38□□□□□ -0.75
Usp38-201ENSMUST00000042724 AI854703Q8BIN3 203 aa10.37□□□□□ -0.75
Usp38-201ENSMUST00000042724 Cdip1Q9DB75 208 aa10.37□□□□□ -0.75
Usp38-201ENSMUST00000042724 A0A286YE49 62 aa10.36□□□□□ -0.75
Usp38-201ENSMUST00000042724 FasnP19096 2504 aaKnown RBP10.36□□□□□ -0.75
Usp38-201ENSMUST00000042724 Wfdc6bF6ULY1 148 aa10.34□□□□□ -0.75
Usp38-201ENSMUST00000042724 Fbn2Q61555 2907 aa10.34□□□□□ -0.75
Usp38-201ENSMUST00000042724 Prrc2cQ3TLH4 2846 aaKnown RBP10.34□□□□□ -0.75
Usp38-201ENSMUST00000042724 Igkv8-30A0A140T8M3 121 aa10.33□□□□□ -0.76
Usp38-201ENSMUST00000042724 SptssbQ925E8 76 aa10.33□□□□□ -0.76
Usp38-201ENSMUST00000042724 Gm3233E9Q2H5 230 aa10.33□□□□□ -0.76
Usp38-201ENSMUST00000042724 Usp24B1AY13 2617 aaKnown RBP10.32□□□□□ -0.76
Usp38-201ENSMUST00000042724 Dmxl1Q6PNC0 3013 aa10.31□□□□□ -0.76
Usp38-201ENSMUST00000042724 Msrb1Q9JLC3 116 aa10.3□□□□□ -0.76
Usp38-201ENSMUST00000042724 KalrnA2CG49 2964 aa10.3□□□□□ -0.76
Usp38-201ENSMUST00000042724 Defb37Q7TMD2 62 aa10.3□□□□□ -0.76
Usp38-201ENSMUST00000042724 C130032M10RikQ8C888 123 aa10.29□□□□□ -0.76
Usp38-201ENSMUST00000042724 Dmac1Q9CQ00 111 aa10.29□□□□□ -0.76
Usp38-201ENSMUST00000042724 AplnQ9R0R4 77 aa10.27□□□□□ -0.77
Usp38-201ENSMUST00000042724 MgaA2AWL7 3003 aaKnown RBP10.27□□□□□ -0.77
Usp38-201ENSMUST00000042724 Cfap54Q8C6S9 3106 aa10.27□□□□□ -0.77
Usp38-201ENSMUST00000042724 Gm28230A0A0A0MQ91 144 aa10.26□□□□□ -0.77
Usp38-201ENSMUST00000042724 Fam19a3Q7TPG6 132 aa10.26□□□□□ -0.77
Usp38-201ENSMUST00000042724 Elof1P60003 83 aa10.26□□□□□ -0.77
Usp38-201ENSMUST00000042724 P84750 121 aa10.25□□□□□ -0.77
Usp38-201ENSMUST00000042724 Cox6a2P43023 97 aa10.24□□□□□ -0.77
Usp38-201ENSMUST00000042724 Ighv2-5A0A0A6YY69 116 aa10.24□□□□□ -0.77
Usp38-201ENSMUST00000042724 UqcrqQ9CQ69 82 aa10.24□□□□□ -0.77
Usp38-201ENSMUST00000042724 Vpreb1P13372 142 aa10.24□□□□□ -0.77
Usp38-201ENSMUST00000042724 Bod1lE9Q6J5 3032 aa10.23□□□□□ -0.77
Usp38-201ENSMUST00000042724 2310034G01RikA0A286YDL3 209 aa10.23□□□□□ -0.77
Usp38-201ENSMUST00000042724 Krtap11-1E9Q2E9 183 aa10.22□□□□□ -0.77
Usp38-201ENSMUST00000042724 AW011738F6S7Q2 159 aa10.22□□□□□ -0.77
Usp38-201ENSMUST00000042724 Gm10837Q3UTT8 145 aa10.22□□□□□ -0.77
Usp38-201ENSMUST00000042724 Chchd10Q7TNL9 138 aa10.22□□□□□ -0.77
Usp38-201ENSMUST00000042724 1810062G17RikG3X8Y2 129 aa10.22□□□□□ -0.77
Usp38-201ENSMUST00000042724 Igkv8-28A0A0G2JE47 121 aa10.22□□□□□ -0.77
Usp38-201ENSMUST00000042724 Prol1E9PYQ4 312 aa10.21□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 89.3 ms