RNA–Protein interactions for RNA: ENSMUST00000001701.3

Hoxc11-201, Transcript of Homeobox protein Hox-C11, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxc11, Length 2,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11-201ENSMUST00000001701 Huwe1Q7TMY8 4377 aaKnown RBP13.15□□□□□ -0.3
Hoxc11-201ENSMUST00000001701 Gm16485Q8C4B7 115 aa13.15□□□□□ -0.3
Hoxc11-201ENSMUST00000001701 Gm29423A0A087WRM1 55 aa13.14□□□□□ -0.31
Hoxc11-201ENSMUST00000001701 MifP34884 115 aaKnown RBP13.14□□□□□ -0.31
Hoxc11-201ENSMUST00000001701 Dppa2Q9CWH0 301 aa13.14□□□□□ -0.31
Hoxc11-201ENSMUST00000001701 Pkd1l1Q8R526 2615 aa13.14□□□□□ -0.31
Hoxc11-201ENSMUST00000001701 Phpt1Q9DAK9 124 aa13.13□□□□□ -0.31
Hoxc11-201ENSMUST00000001701 Ighv2-9A0A075B5Q5 116 aa13.13□□□□□ -0.31
Hoxc11-201ENSMUST00000001701 Wdr38Q9D994 303 aa13.13□□□□□ -0.31
Hoxc11-201ENSMUST00000001701 Pglyrp4Q0VB07 374 aa13.12□□□□□ -0.31
Hoxc11-201ENSMUST00000001701 Wfdc12Q9JHY3 85 aa13.12□□□□□ -0.31
Hoxc11-201ENSMUST00000001701 2310009B15RikA0A0A6YWI4 143 aa13.12□□□□□ -0.31
Hoxc11-201ENSMUST00000001701 Tcl1b5P56845 121 aa13.12□□□□□ -0.31
Hoxc11-201ENSMUST00000001701 Pxt1Q8K459 51 aa13.12□□□□□ -0.31
Hoxc11-201ENSMUST00000001701 Gm9903Q8C9Y8 129 aa13.11□□□□□ -0.31
Hoxc11-201ENSMUST00000001701 2310061N02RikQ9D6S9 174 aa13.11□□□□□ -0.31
Hoxc11-201ENSMUST00000001701 Stab2Q8R4U0 2559 aa13.1□□□□□ -0.31
Hoxc11-201ENSMUST00000001701 Igkv8-16A0A0G2JDG9 121 aa13.1□□□□□ -0.31
Hoxc11-201ENSMUST00000001701 A730009L09RikA0A1B0GS82 72 aa13.1□□□□□ -0.31
Hoxc11-201ENSMUST00000001701 Megf8P60882 2789 aa13.1□□□□□ -0.31
Hoxc11-201ENSMUST00000001701 Dync2h1Q45VK7 4306 aa13.1□□□□□ -0.31
Hoxc11-201ENSMUST00000001701 Gm17509Q9CZ61 145 aa13.1□□□□□ -0.31
Hoxc11-201ENSMUST00000001701 Cox7b2Q9D2H1 82 aa13.1□□□□□ -0.31
Hoxc11-201ENSMUST00000001701 Hrct1Q9D6B9 109 aa13.09□□□□□ -0.31
Hoxc11-201ENSMUST00000001701 Gm10518F6UQQ9 182 aa13.08□□□□□ -0.31
Hoxc11-201ENSMUST00000001701 4930556J24RikQ9D4U7 146 aa13.08□□□□□ -0.32
Hoxc11-201ENSMUST00000001701 Tcl1b3P56842 122 aa13.07□□□□□ -0.32
Hoxc11-201ENSMUST00000001701 Rpl28P41105 137 aaKnown RBP13.06□□□□□ -0.32
Hoxc11-201ENSMUST00000001701 Sprr4Q8CGN8 76 aa13.06□□□□□ -0.32
Hoxc11-201ENSMUST00000001701 Igkv4-92A0A0B4J1I2 117 aa13.06□□□□□ -0.32
Hoxc11-201ENSMUST00000001701 Igkv8-18A0A0B4J1J3 123 aa13.05□□□□□ -0.32
Hoxc11-201ENSMUST00000001701 1810062G17RikG3X8Y2 129 aa13.05□□□□□ -0.32
Hoxc11-201ENSMUST00000001701 Gm10845Q3UNY9 185 aa13.05□□□□□ -0.32
Hoxc11-201ENSMUST00000001701 Gm45213A0A0U1RNZ6 101 aa13.05□□□□□ -0.32
Hoxc11-201ENSMUST00000001701 A0A286YCN5 57 aa13.05□□□□□ -0.32
Hoxc11-201ENSMUST00000001701 9430015G10RikA2ASP7 199 aa13.05□□□□□ -0.32
Hoxc11-201ENSMUST00000001701 Muc6Q80T03 2850 aa13.04□□□□□ -0.32
Hoxc11-201ENSMUST00000001701 Defb11Q8R2I7 77 aa13.04□□□□□ -0.32
Hoxc11-201ENSMUST00000001701 Gm5153P01627 120 aa13.03□□□□□ -0.32
Hoxc11-201ENSMUST00000001701 Reg3dQ9QUS9 175 aa13.03□□□□□ -0.32
Hoxc11-201ENSMUST00000001701 Cox8cA6H666 72 aa13.02□□□□□ -0.33
Hoxc11-201ENSMUST00000001701 Cox6cQ9CPQ1 76 aa13.02□□□□□ -0.33
Hoxc11-201ENSMUST00000001701 Tenm2Q9WTS5 2764 aa13.02□□□□□ -0.33
Hoxc11-201ENSMUST00000001701 Ufsp1Q9CZP0 217 aa13.01□□□□□ -0.33
Hoxc11-201ENSMUST00000001701 Defa16P50714 93 aa13.01□□□□□ -0.33
Hoxc11-201ENSMUST00000001701 Defb29Q8BGW9 78 aa13.01□□□□□ -0.33
Hoxc11-201ENSMUST00000001701 Ube2d4D3YUH6 135 aa13□□□□□ -0.33
Hoxc11-201ENSMUST00000001701 Camk2n2Q78WH7 79 aa13□□□□□ -0.33
Hoxc11-201ENSMUST00000001701 Csdc2Q91YQ3 154 aa13□□□□□ -0.33
Hoxc11-201ENSMUST00000001701 Ube2wQ8VDW4 151 aa13□□□□□ -0.33
Hoxc11-201ENSMUST00000001701 Ociad2Q9D8W7 154 aa13□□□□□ -0.33
Hoxc11-201ENSMUST00000001701 Cox7bP56393 80 aa12.99□□□□□ -0.33
Hoxc11-201ENSMUST00000001701 Hbb-b2P02089 147 aa12.98□□□□□ -0.33
Hoxc11-201ENSMUST00000001701 Gm28269A0A087WSG3 125 aa12.97□□□□□ -0.33
Hoxc11-201ENSMUST00000001701 Trav14-1A0A0G2JF94 121 aa12.97□□□□□ -0.33
Hoxc11-201ENSMUST00000001701 Lgals4Q8K419 326 aa12.97□□□□□ -0.33
Hoxc11-201ENSMUST00000001701 AY074887Q8R5F9 132 aa12.97□□□□□ -0.33
Hoxc11-201ENSMUST00000001701 Trav13n-2A0A0G2JF93 110 aa12.96□□□□□ -0.33
Hoxc11-201ENSMUST00000001701 Gm5142Q8C5X9 133 aa12.96□□□□□ -0.33
Hoxc11-201ENSMUST00000001701 P01819 144 aa12.96□□□□□ -0.34
Hoxc11-201ENSMUST00000001701 Defa1P11477 93 aa12.95□□□□□ -0.34
Hoxc11-201ENSMUST00000001701 Defa20Q45VN2 95 aa12.95□□□□□ -0.34
Hoxc11-201ENSMUST00000001701 CnbpP53996 178 aaKnown RBP12.94□□□□□ -0.34
Hoxc11-201ENSMUST00000001701 Gm17577J3QNF7 156 aa12.93□□□□□ -0.34
Hoxc11-201ENSMUST00000001701 Rpl18aP62717 176 aaKnown RBP12.93□□□□□ -0.34
Hoxc11-201ENSMUST00000001701 PrkdcP97313 4128 aa12.92□□□□□ -0.34
Hoxc11-201ENSMUST00000001701 Sprr1aQ62266 144 aa12.92□□□□□ -0.34
Hoxc11-201ENSMUST00000001701 Gtf2h5Q8K2X8 71 aa12.92□□□□□ -0.34
Hoxc11-201ENSMUST00000001701 Igkv1-35A0A0G2JDE5 120 aa12.91□□□□□ -0.34
Hoxc11-201ENSMUST00000001701 Smim26Q3V460 107 aa12.91□□□□□ -0.34
Hoxc11-201ENSMUST00000001701 Dnal4Q9DCM4 105 aa12.91□□□□□ -0.34
Hoxc11-201ENSMUST00000001701 Gm16381A0A1Y7VKT9 73 aa12.91□□□□□ -0.34
Hoxc11-201ENSMUST00000001701 Gm9507D3Z5T3 223 aa12.91□□□□□ -0.34
Hoxc11-201ENSMUST00000001701 Igkv3-12A0A140T8P0 119 aa12.9□□□□□ -0.34
Hoxc11-201ENSMUST00000001701 Gm9918Q8BUR5 174 aa12.89□□□□□ -0.35
Hoxc11-201ENSMUST00000001701 BB014433Q8C5R5 389 aa12.89□□□□□ -0.35
Hoxc11-201ENSMUST00000001701 MrapQ9D159 127 aa12.89□□□□□ -0.35
Hoxc11-201ENSMUST00000001701 Fam240bJ3QMB3 78 aa12.88□□□□□ -0.35
Hoxc11-201ENSMUST00000001701 4930524J08RikQ9CUJ5 163 aa12.88□□□□□ -0.35
Hoxc11-201ENSMUST00000001701 4930519P11RikQ9CUJ8 166 aa12.88□□□□□ -0.35
Hoxc11-201ENSMUST00000001701 BaalcQ8VHV1 145 aa12.87□□□□□ -0.35
Hoxc11-201ENSMUST00000001701 PlecQ9QXS1 4691 aaKnown RBP12.87□□□□□ -0.35
Hoxc11-201ENSMUST00000001701 Fras1Q80T14 4010 aa12.86□□□□□ -0.35
Hoxc11-201ENSMUST00000001701 Gm9805F6YK59 57 aa12.86□□□□□ -0.35
Hoxc11-201ENSMUST00000001701 FasnP19096 2504 aaKnown RBP12.86□□□□□ -0.35
Hoxc11-201ENSMUST00000001701 Igkv1-88A0A140T8N1 120 aa12.84□□□□□ -0.35
Hoxc11-201ENSMUST00000001701 Trav3-4A0A075B654 114 aa12.84□□□□□ -0.35
Hoxc11-201ENSMUST00000001701 Klk12B2RVZ0 247 aa12.84□□□□□ -0.35
Hoxc11-201ENSMUST00000001701 Gm10320E9PW43 113 aa12.84□□□□□ -0.35
Hoxc11-201ENSMUST00000001701 Gm10770F7D043 238 aa12.83□□□□□ -0.36
Hoxc11-201ENSMUST00000001701 TeppQ6IMH0 216 aa12.83□□□□□ -0.36
Hoxc11-201ENSMUST00000001701 1700020N15RikL7MTX3 112 aa12.83□□□□□ -0.36
Hoxc11-201ENSMUST00000001701 Mrpl52Q9D0Y8 121 aa12.83□□□□□ -0.36
Hoxc11-201ENSMUST00000001701 Gm11627A6PWP4 55 aa12.82□□□□□ -0.36
Hoxc11-201ENSMUST00000001701 Gm10735Q3US96 136 aa12.82□□□□□ -0.36
Hoxc11-201ENSMUST00000001701 Defb40Q70KL2 73 aa12.82□□□□□ -0.36
Hoxc11-201ENSMUST00000001701 Rpl39lQ9CQD0 51 aa12.82□□□□□ -0.36
Hoxc11-201ENSMUST00000001701 Gm10767Q3TQP0 103 aa12.81□□□□□ -0.36
Hoxc11-201ENSMUST00000001701 Cby1Q9D1C2 127 aa12.81□□□□□ -0.36
Hoxc11-201ENSMUST00000001701 Dnah11E9Q7N9 4488 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 166.6 ms