RNA–Protein interactions for RNA: ENSMUST00000052366.4

Pcdhb1-201, Transcript of Protocadherin beta 1, mousemouse

APPRIS P1 BASIC

Gene Pcdhb1, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1-201ENSMUST00000052366 P01755 137 aa8.91□□□□□ -0.98
Pcdhb1-201ENSMUST00000052366 CdsnQ7TPC1 561 aa8.91□□□□□ -0.98
Pcdhb1-201ENSMUST00000052366 Gm9767G3X930 207 aa8.9□□□□□ -0.98
Pcdhb1-201ENSMUST00000052366 Ndufa12Q7TMF3 145 aaKnown RBP8.9□□□□□ -0.98
Pcdhb1-201ENSMUST00000052366 MobpQ9D2P8 170 aa8.9□□□□□ -0.98
Pcdhb1-201ENSMUST00000052366 Tmem213Q08EA8 116 aa8.9□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Hspg2Q05793 3707 aaKnown RBP8.9□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Igkv4-72A0A0B4J1I4 117 aa8.89□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Defb29Q8BGW9 78 aa8.89□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Zfand2aQ9JII7 171 aa8.89□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Prr13Q9CQJ5 137 aa8.88□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Gm3250E9Q1M3 230 aa8.88□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Igkv1-35A0A0G2JDE5 120 aa8.87□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Igkv1-117A0A140T8M0 119 aa8.87□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Foxc1Q61572 553 aa8.87□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Defb50Q6TU36 73 aa8.87□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Prh1P05142 261 aa8.87□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Gm10549Q3URY4 149 aa8.87□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Vmo1Q5SXG7 201 aa8.86□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Tm2d2Q8R0I4 213 aa8.86□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Ss18l2Q9D174 77 aa8.86□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Trav14d-3-dv8A0A075B619 120 aa8.85□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Igkv4-54A0A0G2JES9 117 aa8.84□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Spink4O35679 86 aa8.84□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Rpl28P41105 137 aaKnown RBP8.84□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Atp5eP56382 52 aa8.84□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Dand5Q76LW6 185 aa8.84□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 5730596B20RikQ8BQ08 205 aa8.84□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Igkv4-53A0A0G2JFC6 119 aa8.84□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Krtap24-1G3X9A2 248 aa8.84□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Cox6b1P56391 86 aaKnown RBP8.84□□□□□ -0.99
Pcdhb1-201ENSMUST00000052366 Trav13-1A0A075B644 110 aa8.83□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Leap2Q91V13 76 aa8.83□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Gm43218A0A0G2JGT0 114 aa8.83□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Igkv1-99F6XWB2 120 aa8.83□□□□□ -1
Pcdhb1-201ENSMUST00000052366 4930524J08RikQ9CUJ5 163 aa8.83□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Hivep3A2A884 2348 aa8.83□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Nhlrc1Q8BR37 401 aa8.82□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Prss58Q8BW11 241 aa8.82□□□□□ -1
Pcdhb1-201ENSMUST00000052366 PrcdQ00LT2 53 aa8.82□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Gm904Q3V2L5 102 aa8.82□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Odf3l2Q3TZ65 277 aa8.81□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Gm16381A0A1Y7VKT9 73 aa8.81□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Erdr1J3QMM0 206 aa8.81□□□□□ -1
Pcdhb1-201ENSMUST00000052366 SbsponQ3UPR9 264 aa8.81□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Trav13n-2A0A0G2JF93 110 aa8.8□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Esm1Q9QYY7 184 aa8.8□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Ighv2-9-1A0A075B697 116 aa8.8□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Igkv6-13A0A0G2JGY3 119 aa8.8□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Dnal4Q9DCM4 105 aa8.8□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Zfp951A0A087WRH0 451 aa8.79□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Gm3233E9Q2H5 230 aa8.79□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Defa1P11477 93 aa8.79□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Tex15F8VPN2 2785 aa8.79□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Q8R092 253 aa8.78□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Igkv4-61A0A0G2JH00 117 aa8.78□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Xcl1P47993 114 aa8.78□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Trav3-4A0A075B654 114 aa8.77□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Ighv1-59A0A0A6YXE0 117 aa8.77□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Tmem223Q9CQE2 199 aaKnown RBP8.77□□□□□ -1
Pcdhb1-201ENSMUST00000052366 Acyp1P56376 99 aa8.76□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 Nbeal2Q6ZQA0 2742 aa8.76□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 Trav13-2A0A075B649 110 aa8.75□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 Mzt1Q8BUR9 78 aa8.75□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 Trav9n-4A0A075B631 113 aa8.75□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 Trbv13-2A0A140T8N6 113 aa8.75□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 2010109I03RikQ9CQ11 111 aa8.75□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 Gm7102J3QQ10 178 aa8.74□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 CrygfQ9CXV3 174 aa8.74□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 Hbb-b2P02089 147 aa8.73□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 Smim26Q3V460 107 aa8.73□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 Tmem86bQ497J1 226 aa8.73□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 Sprr1bQ62267 153 aa8.73□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 Gm5142Q8C5X9 133 aa8.73□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 D730001G18RikA0A087WQU7 115 aa8.73□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 Igkv3-9A0A140T8P4 119 aa8.73□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 Dad1P61804 113 aa8.73□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 Znf414Q9DCK4 299 aa8.73□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 Tenm4Q3UHK6 2771 aa8.73□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 BB014433Q8C5R5 389 aa8.72□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 Ighv1-56A0A0A6YXG2 117 aa8.72□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 PkigO70139 76 aa8.72□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 MifP34884 115 aaKnown RBP8.72□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 Defa16P50714 93 aa8.72□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 Gm28539A0A087WSL9 92 aa8.71□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 CrygdP04342 174 aa8.71□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 CrygeQ03740 174 aa8.71□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 Rpl39lQ9CQD0 51 aa8.71□□□□□ -1.01
Pcdhb1-201ENSMUST00000052366 Higd2aQ9CQJ1 106 aa8.71□□□□□ -1.02
Pcdhb1-201ENSMUST00000052366 Igkv8-18A0A0B4J1J3 123 aa8.7□□□□□ -1.02
Pcdhb1-201ENSMUST00000052366 Gm10735Q3US96 136 aa8.7□□□□□ -1.02
Pcdhb1-201ENSMUST00000052366 CicQ924A2 2510 aa8.7□□□□□ -1.02
Pcdhb1-201ENSMUST00000052366 C530025M09RikF6RGA8 229 aa8.69□□□□□ -1.02
Pcdhb1-201ENSMUST00000052366 Scgb1b2O35176 93 aa8.69□□□□□ -1.02
Pcdhb1-201ENSMUST00000052366 Wfdc12Q9JHY3 85 aa8.69□□□□□ -1.02
Pcdhb1-201ENSMUST00000052366 Ighv8-11A0A075B5X4 119 aa8.68□□□□□ -1.02
Pcdhb1-201ENSMUST00000052366 Klk12B2RVZ0 247 aa8.68□□□□□ -1.02
Pcdhb1-201ENSMUST00000052366 1810062G17RikG3X8Y2 129 aa8.68□□□□□ -1.02
Pcdhb1-201ENSMUST00000052366 Gm5153P01627 120 aa8.68□□□□□ -1.02
Pcdhb1-201ENSMUST00000052366 Defa20Q45VN2 95 aa8.68□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 169.4 ms