RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Ufsp1Q9CZP0 217 aa11.97□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Ighv1-82A0A0G2JEU7 117 aa11.97□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Smrp1Q2MH31 260 aa11.97□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Klk9Q32M27 251 aa11.97□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 CrygcQ61597 174 aa11.97□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 4930535I16RikQ9CUI2 172 aa11.97□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Wdr38Q9D994 303 aa11.96□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Tns1E9Q0S6 1888 aaKnown RBP11.96□□□□□ -0.49
Pcdh1-203ENSMUST00000160721 Tet2Q4JK59 1912 aaKnown RBP11.96□□□□□ -0.5
Pcdh1-203ENSMUST00000160721 Rnf185Q91YT2 192 aa11.96□□□□□ -0.5
Pcdh1-203ENSMUST00000160721 E130114P18RikF6S0S7 154 aa11.95□□□□□ -0.5
Pcdh1-203ENSMUST00000160721 PlaurP35456 327 aa11.95□□□□□ -0.5
Pcdh1-203ENSMUST00000160721 Gm10401E9Q3K6 71 aa11.95□□□□□ -0.5
Pcdh1-203ENSMUST00000160721 Znf239P24399 201 aa11.94□□□□□ -0.5
Pcdh1-203ENSMUST00000160721 Vpreb1P13372 142 aa11.93□□□□□ -0.5
Pcdh1-203ENSMUST00000160721 Tcte2E9PY37 120 aa11.93□□□□□ -0.5
Pcdh1-203ENSMUST00000160721 Defb10Q8R2I8 73 aa11.93□□□□□ -0.5
Pcdh1-203ENSMUST00000160721 Gm9767G3X930 207 aa11.93□□□□□ -0.5
Pcdh1-203ENSMUST00000160721 Ndufc1Q9CQY9 76 aa11.93□□□□□ -0.5
Pcdh1-203ENSMUST00000160721 Rnf152Q8BG47 203 aa11.93□□□□□ -0.5
Pcdh1-203ENSMUST00000160721 Gm6899Q3USS0 134 aa11.92□□□□□ -0.5
Pcdh1-203ENSMUST00000160721 Eif4ebp1Q60876 117 aa11.92□□□□□ -0.5
Pcdh1-203ENSMUST00000160721 Ube2d4D3YUH6 135 aa11.91□□□□□ -0.5
Pcdh1-203ENSMUST00000160721 Lrp4Q8VI56 1905 aa11.91□□□□□ -0.5
Pcdh1-203ENSMUST00000160721 Spry2Q9QXV8 315 aa11.9□□□□□ -0.5
Pcdh1-203ENSMUST00000160721 Gm10226O88253 85 aa11.9□□□□□ -0.5
Pcdh1-203ENSMUST00000160721 Gm12689Q8BQU9 117 aa11.9□□□□□ -0.5
Pcdh1-203ENSMUST00000160721 TshbP12656 138 aa11.9□□□□□ -0.5
Pcdh1-203ENSMUST00000160721 Gm12057A0A087WR21 115 aa11.89□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 Psmb8P28063 276 aa11.89□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 Fam19a1Q7TPG8 133 aa11.89□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 Ighv2-3A0A075B696 115 aa11.89□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 C1qcQ02105 246 aa11.89□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 Ndufs5Q99LY9 106 aa11.89□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 P01729 129 aa11.89□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 Gm4707V9GXN5 68 aa11.89□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 9230102O04RikA2ASX7 82 aa11.88□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 A130051J06RikQ8CAU1 227 aa11.88□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 Igkv1-117A0A140T8M0 119 aa11.88□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 Igkv3-4A0A140T8Q4 119 aa11.88□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 Pou2af1Q64693 256 aa11.88□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 P06320 134 aa11.88□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 ScxQ64124 207 aa11.88□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 Igkv3-3A0A140T8Q0 119 aa11.87□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 U90926O08546 118 aa11.87□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 Ighv1-61P01749 117 aa11.87□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 1520401A03RikA0A0J9YVH6 598 aa11.86□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 Cox7bP56393 80 aa11.86□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 Lama2Q60675 3118 aaKnown RBP11.86□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 Gm16223Q8CBM3 117 aa11.86□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 Igkv1-110A0A0B4J1I0 119 aa11.85□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 Nav3Q80TN7 2359 aa11.85□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 Hivep3A2A884 2348 aa11.85□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 Setd2E9Q5F9 2537 aa11.85□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 Ighv1-72P01751 139 aa11.85□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 Q9D8Q6 235 aa11.85□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 Ighv8-11A0A075B5X4 119 aa11.85□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 Abca12E9Q876 2595 aa11.84□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 Tanc2A2A690 1994 aa11.84□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 Gm9805F6YK59 57 aa11.84□□□□□ -0.51
Pcdh1-203ENSMUST00000160721 H2al1bA0A087WP11 105 aa11.83□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Sec61gP60060 68 aa11.83□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Defb13Q8R2I4 64 aa11.83□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Gm10647E9Q8X0 124 aa11.83□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Smim1P0C8K7 78 aa11.83□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Lypd6Q8BPP5 171 aa11.83□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Ighv1-63A0A075B5X2 117 aa11.83□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Plac8l1Q08EJ0 177 aa11.83□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Timm17bQ9Z0V7 172 aa11.83□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Col4a2P08122 1707 aa11.83□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 P01823 113 aa11.82□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 MtorQ9JLN9 2549 aa11.82□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 A830005F24RikQ8BRT5 167 aa11.82□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Fgf23Q9EPC2 251 aa11.81□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 CenpwQ3URR0 86 aa11.81□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Ighv1-62-1A0A075B5U3 116 aa11.81□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Ighv2-6-8A0A0A6YWY9 116 aa11.81□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Serp2Q6TAW2 65 aa11.8□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Ighv10-1A0A0B4J1J6 119 aa11.8□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Gm8439G3UWA7 96 aa11.8□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 NpwA0A1L1STR8 176 aa11.79□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Pla2g2eQ9QUL3 142 aa11.79□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 P01755 137 aa11.79□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Fgfbp3Q1HCM0 245 aa11.79□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 9430015G10RikA2ASP7 199 aa11.79□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Ighv1-66A0A075B5X5 117 aa11.78□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Defb40Q70KL2 73 aa11.78□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Tcl1b3P56842 122 aa11.78□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Ighv1-5A0A0A6YWG2 117 aa11.78□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Sox16Q62247 57 aa11.78□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 A0A286YCN5 57 aa11.77□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 PrlhG3UWC3 86 aa11.77□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 AcanQ61282 2132 aaKnown RBP11.77□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Ighv10-3A0A075B5T6 119 aa11.77□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 Gm21748Q3UE70 102 aa11.77□□□□□ -0.52
Pcdh1-203ENSMUST00000160721 TrioQ0KL02 3102 aa11.77□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Unc79Q0KK59 2596 aa11.77□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Fam19a5Q91WE9 132 aa11.76□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Atox1O08997 68 aaKnown RBP11.76□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Wfdc12Q9JHY3 85 aa11.76□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 49 ms