RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Rhox8Q6VSS7 320 aa28.85■■■□□ 2.21
Pcdh1-203ENSMUST00000160721 NischQ80TM9 1593 aa26.12■■□□□ 1.77
Pcdh1-203ENSMUST00000160721 Rpgrip1Q9EPQ2 1331 aa25.95■■□□□ 1.74
Pcdh1-203ENSMUST00000160721 Ccdc136Q3TVA9 1136 aa25.88■■□□□ 1.73
Pcdh1-203ENSMUST00000160721 Esf1Q3V1V3 845 aaKnown RBP25.78■■□□□ 1.72
Pcdh1-203ENSMUST00000160721 Ehmt2Q9Z148 1263 aaKnown RBP25.75■■□□□ 1.71
Pcdh1-203ENSMUST00000160721 Cngb1E1AZ71 1325 aa25.54■■□□□ 1.68
Pcdh1-203ENSMUST00000160721 Las1lA2BE28 776 aaKnown RBP25.19■■□□□ 1.62
Pcdh1-203ENSMUST00000160721 Zeb1Q64318 1117 aa25.12■■□□□ 1.61
Pcdh1-203ENSMUST00000160721 Trim41Q5NCC3 630 aa25.09■■□□□ 1.61
Pcdh1-203ENSMUST00000160721 Abcc9P70170 1546 aa25.09■■□□□ 1.61
Pcdh1-203ENSMUST00000160721 Wdr66E9Q743 1299 aa25.01■■□□□ 1.59
Pcdh1-203ENSMUST00000160721 Gab3Q8BSM5 595 aa25.01■■□□□ 1.59
Pcdh1-203ENSMUST00000160721 Npm2Q80W85 207 aa24.9■■□□□ 1.58
Pcdh1-203ENSMUST00000160721 Gm35339A0A140LHH9 1649 aa24.74■■□□□ 1.55
Pcdh1-203ENSMUST00000160721 Myt1lP97500 1187 aa24.68■■□□□ 1.54
Pcdh1-203ENSMUST00000160721 Pelp1Q9DBD5 1123 aaKnown RBP24.61■■□□□ 1.53
Pcdh1-203ENSMUST00000160721 Ube2uB1AUC4 352 aa24.6■■□□□ 1.53
Pcdh1-203ENSMUST00000160721 Il27Q8K3I6 234 aa24.48■■□□□ 1.51
Pcdh1-203ENSMUST00000160721 Zcchc6Q5BLK4 1491 aaKnown RBP24.31■■□□□ 1.48
Pcdh1-203ENSMUST00000160721 CenpbP27790 599 aa24.05■■□□□ 1.44
Pcdh1-203ENSMUST00000160721 Amer1Q7TS75 1132 aa24■■□□□ 1.43
Pcdh1-203ENSMUST00000160721 Acin1Q9JIX8 1338 aaKnown RBP24■■□□□ 1.43
Pcdh1-203ENSMUST00000160721 Abcc8B2RUS7 1588 aa23.98■■□□□ 1.43
Pcdh1-203ENSMUST00000160721 UbtfP25976 765 aaKnown RBP23.75■■□□□ 1.39
Pcdh1-203ENSMUST00000160721 NefmP08553 848 aa23.7■■□□□ 1.38
Pcdh1-203ENSMUST00000160721 Slc24a1Q91WD8 1130 aa23.66■■□□□ 1.38
Pcdh1-203ENSMUST00000160721 Ap3b1Q9Z1T1 1105 aa23.62■■□□□ 1.37
Pcdh1-203ENSMUST00000160721 Npm1Q61937 292 aaKnown RBP23.56■■□□□ 1.36
Pcdh1-203ENSMUST00000160721 Stra8P70278 393 aa23.52■■□□□ 1.36
Pcdh1-203ENSMUST00000160721 HrcG5E8J6 738 aa23.4■■□□□ 1.34
Pcdh1-203ENSMUST00000160721 Pcgf6Q99NA9 353 aa23.38■■□□□ 1.33
Pcdh1-203ENSMUST00000160721 Ttbk1Q6PCN3 1308 aa23.37■■□□□ 1.33
Pcdh1-203ENSMUST00000160721 Cdk11bP24788 784 aaKnown RBP23.36■■□□□ 1.33
Pcdh1-203ENSMUST00000160721 Ccdc180J3QNE4 1664 aa23.32■■□□□ 1.32
Pcdh1-203ENSMUST00000160721 Fam50aQ9WV03 339 aaKnown RBP23.25■■□□□ 1.31
Pcdh1-203ENSMUST00000160721 Ifnlr1Q8CGK5 535 aa23.25■■□□□ 1.31
Pcdh1-203ENSMUST00000160721 Ubl4bQ9CQ84 188 aa23.15■■□□□ 1.3
Pcdh1-203ENSMUST00000160721 Ppargc1bQ8VHJ7 1014 aa23.09■■□□□ 1.29
Pcdh1-203ENSMUST00000160721 Nop58Q6DFW4 536 aaKnown RBP23.07■■□□□ 1.28
Pcdh1-203ENSMUST00000160721 4933416C03RikQ3V063 378 aa23.07■■□□□ 1.28
Pcdh1-203ENSMUST00000160721 Rtl1Q7M732 1744 aa23.04■■□□□ 1.28
Pcdh1-203ENSMUST00000160721 Myt1Q8CFC2 1127 aa23.02■■□□□ 1.28
Pcdh1-203ENSMUST00000160721 Neurod1Q60867 357 aa23■■□□□ 1.27
Pcdh1-203ENSMUST00000160721 Lmod2Q3UHZ5 550 aa22.99■■□□□ 1.27
Pcdh1-203ENSMUST00000160721 Zbtb7cQ8VCZ7 619 aa22.98■■□□□ 1.27
Pcdh1-203ENSMUST00000160721 Rb1cc1Q9ESK9 1588 aa22.96■■□□□ 1.27
Pcdh1-203ENSMUST00000160721 Tnnt3Q9QZ47 272 aa22.95■■□□□ 1.26
Pcdh1-203ENSMUST00000160721 Supt5hO55201 1082 aaKnown RBP22.95■■□□□ 1.26
Pcdh1-203ENSMUST00000160721 Eif5bQ05D44 1216 aaKnown RBP22.94■■□□□ 1.26
Pcdh1-203ENSMUST00000160721 NrdcQ8BHG1 1161 aa22.94■■□□□ 1.26
Pcdh1-203ENSMUST00000160721 4930567H17RikQ3V0K5 233 aa22.93■■□□□ 1.26
Pcdh1-203ENSMUST00000160721 Os9Q8K2C7 672 aa22.92■■□□□ 1.26
Pcdh1-203ENSMUST00000160721 Fkbp15Q6P9Q6 1216 aaKnown RBP22.92■■□□□ 1.26
Pcdh1-203ENSMUST00000160721 Brd4Q9ESU6 1400 aaKnown RBP22.9■■□□□ 1.26
Pcdh1-203ENSMUST00000160721 NacadQ5SWP3 1504 aa22.9■■□□□ 1.26
Pcdh1-203ENSMUST00000160721 NclP09405 707 aaKnown RBP22.87■■□□□ 1.25
Pcdh1-203ENSMUST00000160721 Plppr3Q7TPB0 716 aa22.83■■□□□ 1.24
Pcdh1-203ENSMUST00000160721 NeflP08551 543 aa22.78■■□□□ 1.24
Pcdh1-203ENSMUST00000160721 Hnrnpul2Q00PI9 745 aaKnown RBP22.75■■□□□ 1.23
Pcdh1-203ENSMUST00000160721 Gm13697A2AK42 830 aa22.74■■□□□ 1.23
Pcdh1-203ENSMUST00000160721 Anp32bQ9EST5 272 aaKnown RBP22.74■■□□□ 1.23
Pcdh1-203ENSMUST00000160721 Plekhg3Q4VAC9 1341 aa22.73■■□□□ 1.23
Pcdh1-203ENSMUST00000160721 TonslQ6NZL6 1363 aa22.64■■□□□ 1.21
Pcdh1-203ENSMUST00000160721 Chic1Q8CBW7 227 aa22.61■■□□□ 1.21
Pcdh1-203ENSMUST00000160721 Mier1Q5UAK0 511 aa22.51■■□□□ 1.19
Pcdh1-203ENSMUST00000160721 Erich6D3Z6S9 713 aa22.46■■□□□ 1.19
Pcdh1-203ENSMUST00000160721 Ercc6F8VPZ5 1481 aa22.44■■□□□ 1.18
Pcdh1-203ENSMUST00000160721 Dcaf1Q80TR8 1506 aa22.42■■□□□ 1.18
Pcdh1-203ENSMUST00000160721 Rtl5Q5DTT4 599 aa22.42■■□□□ 1.18
Pcdh1-203ENSMUST00000160721 Kdm5dQ62240 1548 aa22.42■■□□□ 1.18
Pcdh1-203ENSMUST00000160721 Kif15Q6P9L6 1387 aa22.39■■□□□ 1.17
Pcdh1-203ENSMUST00000160721 Atp1b4Q99ME6 356 aa22.39■■□□□ 1.17
Pcdh1-203ENSMUST00000160721 Baz1aO88379 1555 aa22.33■■□□□ 1.17
Pcdh1-203ENSMUST00000160721 Zbtb4Q5F293 982 aa22.32■■□□□ 1.16
Pcdh1-203ENSMUST00000160721 Clip1Q922J3 1391 aa22.3■■□□□ 1.16
Pcdh1-203ENSMUST00000160721 Gm13695A2AK44 830 aa22.28■■□□□ 1.16
Pcdh1-203ENSMUST00000160721 DiexfQ8BTT6 772 aaKnown RBP22.28■■□□□ 1.16
Pcdh1-203ENSMUST00000160721 Rsf1E9PWW9 1441 aaKnown RBP22.28■■□□□ 1.16
Pcdh1-203ENSMUST00000160721 Gm38655A0A286YDK6 273 aa22.22■■□□□ 1.15
Pcdh1-203ENSMUST00000160721 Anp32aO35381 247 aa22.22■■□□□ 1.15
Pcdh1-203ENSMUST00000160721 ClspnQ80YR7 1315 aa22.22■■□□□ 1.15
Pcdh1-203ENSMUST00000160721 DaxxO35613 739 aa22.19■■□□□ 1.14
Pcdh1-203ENSMUST00000160721 Mapk8ip2Q9ERE9 830 aa22.13■■□□□ 1.13
Pcdh1-203ENSMUST00000160721 Safb2Q80YR5 991 aaKnown RBP22.09■■□□□ 1.13
Pcdh1-203ENSMUST00000160721 Prdm10Q3UTQ7 1184 aa22.09■■□□□ 1.13
Pcdh1-203ENSMUST00000160721 Cep164Q5DU05 1446 aa22.09■■□□□ 1.13
Pcdh1-203ENSMUST00000160721 Eid3Q3V124 375 aa22.08■■□□□ 1.12
Pcdh1-203ENSMUST00000160721 Chic2Q9D9G3 165 aa22.07■■□□□ 1.12
Pcdh1-203ENSMUST00000160721 Pds5bQ4VA53 1446 aaKnown RBP22.06■■□□□ 1.12
Pcdh1-203ENSMUST00000160721 Arhgap27A2AB59 869 aa22.04■■□□□ 1.12
Pcdh1-203ENSMUST00000160721 Ccdc18Q640L5 1455 aa22.03■■□□□ 1.12
Pcdh1-203ENSMUST00000160721 Csrnp3P59055 597 aa22.02■■□□□ 1.12
Pcdh1-203ENSMUST00000160721 Golga3P55937 1487 aa21.97■■□□□ 1.11
Pcdh1-203ENSMUST00000160721 Sall2Q9QX96 1004 aa21.95■■□□□ 1.1
Pcdh1-203ENSMUST00000160721 BlmO88700 1416 aa21.94■■□□□ 1.1
Pcdh1-203ENSMUST00000160721 Setd5Q5XJV7 1441 aa21.89■■□□□ 1.09
Pcdh1-203ENSMUST00000160721 ArxO35085 564 aa21.89■■□□□ 1.09
Pcdh1-203ENSMUST00000160721 Anks4bQ8K3X6 423 aa21.88■■□□□ 1.09
Pcdh1-203ENSMUST00000160721 Sycp2Q9CUU3 1500 aa21.85■■□□□ 1.09
Retrieved 100 of 22,080 RNA–protein pairs in 45.4 ms