RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Edn3P48299 214 aa5.51□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Fam19a1Q7TPG8 133 aa5.51□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Shisa2Q8QZV2 295 aa5.51□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Tmem223Q9CQE2 199 aaKnown RBP5.51□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Pla2g2dQ9WVF6 144 aa5.51□□□□□ -1.53
Bdnf-209ENSMUST00000111050 P01753 117 aa5.51□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Vmo1Q5SXG7 201 aa5.51□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Dmbt1Q60997 2085 aa5.5□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Prp2P05143 317 aa5.5□□□□□ -1.53
Bdnf-209ENSMUST00000111050 MplkipQ9D011 178 aa5.5□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Tmem254aP0DN89 123 aa5.5□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Tmem254bP0DN90 123 aa5.5□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Tmem254cP0DN91 123 aa5.5□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Ntn5Q3UQ22 452 aa5.5□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Pou2af1Q64693 256 aa5.5□□□□□ -1.53
Bdnf-209ENSMUST00000111050 3110018I06RikQ9CXS0 120 aa5.5□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Pfn2Q9JJV2 140 aa5.5□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Igkv4-78A0A0A6YYE5 119 aa5.5□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Krtap16-1A2A5X5 502 aa5.5□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Gm9925F6T2U3 160 aa5.5□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Ighv1-61P01749 117 aa5.5□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Fam229bQ8CF36 80 aa5.5□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Ubl5Q9EPV8 73 aa5.5□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Trank1Q8BV79 2999 aa5.5□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Gm37389A0A0A6YW05 95 aa5.49□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Ighv1-11A0A0A6YWI9 117 aa5.49□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Dkk4Q8VEJ3 221 aa5.49□□□□□ -1.53
Bdnf-209ENSMUST00000111050 B230217C12RikE9Q3Z1 139 aa5.49□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Gm10647E9Q8X0 124 aa5.49□□□□□ -1.53
Bdnf-209ENSMUST00000111050 BikO70337 150 aa5.49□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Ndufa12Q7TMF3 145 aaKnown RBP5.49□□□□□ -1.53
Bdnf-209ENSMUST00000111050 EnhoQ8K1D8 76 aa5.49□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Dph3Q8K0W9 82 aa5.49□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Igkv4-53A0A0G2JFC6 119 aa5.48□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Igkv4-62A0A0G2JDW9 117 aa5.48□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Igkv1-117A0A140T8M0 119 aa5.48□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Gm11213A0A1B0GR83 88 aa5.48□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Chd9Q8BYH8 2885 aa5.48□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Snrpd3P62320 126 aaKnown RBP5.48□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Lama5Q61001 3718 aa5.48□□□□□ -1.53
Bdnf-209ENSMUST00000111050 MsmbO08540 113 aa5.48□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Lamtor3O88653 124 aa5.48□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Acyp1P56376 99 aa5.48□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Lage3Q9CR70 148 aa5.48□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Sec16aA2AIX1 2377 aa5.47□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Trav13n-2A0A0G2JF93 110 aa5.47□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Rpl36aP83882 106 aaKnown RBP5.47□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Gm10490F6VBM2 120 aa5.47□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Igkv4-69A0A0B4J1I6 116 aa5.47□□□□□ -1.53
Bdnf-209ENSMUST00000111050 4930546C10RikE9Q4Y3 121 aa5.47□□□□□ -1.53
Bdnf-209ENSMUST00000111050 E130116L18RikQ8BMV6 101 aa5.47□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Gm10322F7D7I4 111 aa5.46□□□□□ -1.53
Bdnf-209ENSMUST00000111050 1810062G17RikG3X8Y2 129 aa5.46□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Fxyd5P97808 178 aa5.46□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Serp1Q9Z1W5 66 aa5.46□□□□□ -1.53
Bdnf-209ENSMUST00000111050 Bean1Q9EQG5 255 aa5.46□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Spink1P09036 80 aa5.46□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Gm10549Q3URY4 149 aa5.46□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Igkv4-79A0A075B5L8 119 aa5.45□□□□□ -1.54
Bdnf-209ENSMUST00000111050 H2al1bA0A087WP11 105 aa5.45□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Ifitm6A0A1B0GS75 124 aa5.45□□□□□ -1.54
Bdnf-209ENSMUST00000111050 H2al1kJ3QP08 105 aa5.45□□□□□ -1.54
Bdnf-209ENSMUST00000111050 CnbpP53996 178 aaKnown RBP5.45□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Gm10577Q3UDV9 132 aa5.45□□□□□ -1.54
Bdnf-209ENSMUST00000111050 H2al1eQ810S6 105 aa5.45□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Cd99Q8VCN6 175 aa5.45□□□□□ -1.54
Bdnf-209ENSMUST00000111050 H2al1mQ9DAD9 105 aa5.45□□□□□ -1.54
Bdnf-209ENSMUST00000111050 LrbaQ9ESE1 2856 aa5.45□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Gm10553J3QPF1 123 aa5.45□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Gm5153P01627 120 aa5.45□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Spink8Q09TK9 105 aa5.45□□□□□ -1.54
Bdnf-209ENSMUST00000111050 A530084C06RikQ3UTW2 186 aa5.45□□□□□ -1.54
Bdnf-209ENSMUST00000111050 4930556J24RikQ9D4U7 146 aa5.44□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Ighv1-63A0A075B5X2 117 aa5.44□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Trav13-4-dv7A0A075B6C2 110 aa5.44□□□□□ -1.54
Bdnf-209ENSMUST00000111050 B230359F08RikA0A0B4J1K3 109 aa5.44□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Dynlrb2Q9DAJ5 96 aa5.44□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Ankhd1E9PUR0 2548 aaKnown RBP5.44□□□□□ -1.54
Bdnf-209ENSMUST00000111050 E130208F15RikQ3UPV3 143 aa5.44□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Vpreb2P13373 142 aa5.43□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Trav9-2A0A075B647 113 aa5.43□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Trav9-4A0A0B4J1K2 113 aa5.43□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Sec61gP60060 68 aa5.43□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Wfdc15aQ8BH89 80 aa5.43□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Ucn2Q99ML8 113 aa5.43□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Zfp292Q9Z2U2 2698 aa5.43□□□□□ -1.54
Bdnf-209ENSMUST00000111050 SonQ9QX47 2444 aaKnown RBP5.43□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Igkv2-109A0A075B5K6 120 aa5.42□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Gm15557A6PWY0 234 aa5.42□□□□□ -1.54
Bdnf-209ENSMUST00000111050 1810032O08RikE9PZV8 113 aa5.42□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Gm10509O88255 85 aa5.42□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Crlf1Q9JM58 425 aa5.42□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Trbv13-2A0A140T8N6 113 aa5.42□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Igkv8-21A0A140T8P7 120 aa5.42□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Q9DAA7 145 aa5.42□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Trav13-1A0A075B644 110 aa5.42□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Prr9Q8BV84 116 aa5.42□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Synj2bpQ9D6K5 145 aa5.42□□□□□ -1.54
Bdnf-209ENSMUST00000111050 LystP97412 3788 aa5.41□□□□□ -1.54
Bdnf-209ENSMUST00000111050 Igkv1-99F6XWB2 120 aa5.41□□□□□ -1.54
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms