RNA–Protein interactions for RNA: ENSMUST00000021288.9

Usp43-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp43, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43-201ENSMUST00000021288 Ighv3-3A0A0A6YWL2 116 aa11.29□□□□□ -0.6
Usp43-201ENSMUST00000021288 Psmb8P28063 276 aa11.29□□□□□ -0.6
Usp43-201ENSMUST00000021288 Gm21748Q3UE70 102 aa11.29□□□□□ -0.6
Usp43-201ENSMUST00000021288 Ss18l2Q9D174 77 aa11.29□□□□□ -0.6
Usp43-201ENSMUST00000021288 VcanQ62059 3357 aa11.29□□□□□ -0.6
Usp43-201ENSMUST00000021288 Celsr1O35161 3034 aa11.29□□□□□ -0.6
Usp43-201ENSMUST00000021288 FasnP19096 2504 aaKnown RBP11.29□□□□□ -0.6
Usp43-201ENSMUST00000021288 Dmxl2Q8BPN8 3032 aa11.28□□□□□ -0.6
Usp43-201ENSMUST00000021288 Klk12B2RVZ0 247 aa11.28□□□□□ -0.6
Usp43-201ENSMUST00000021288 SrarpQ3ULG3 163 aa11.28□□□□□ -0.6
Usp43-201ENSMUST00000021288 Atp5g3P56384 141 aa11.28□□□□□ -0.6
Usp43-201ENSMUST00000021288 Klk11Q9QYN3 276 aa11.28□□□□□ -0.6
Usp43-201ENSMUST00000021288 Ly6c2P0CW03 131 aa11.28□□□□□ -0.6
Usp43-201ENSMUST00000021288 FlnaQ8BTM8 2647 aaKnown RBP11.27□□□□□ -0.6
Usp43-201ENSMUST00000021288 Prr9Q8BV84 116 aa11.27□□□□□ -0.6
Usp43-201ENSMUST00000021288 Igkv1-122A0A140T8M9 119 aa11.27□□□□□ -0.61
Usp43-201ENSMUST00000021288 Sfta2E9PXB6 77 aa11.27□□□□□ -0.61
Usp43-201ENSMUST00000021288 Defa21Q8C1P2 93 aa11.27□□□□□ -0.61
Usp43-201ENSMUST00000021288 Notch1Q01705 2531 aa11.27□□□□□ -0.61
Usp43-201ENSMUST00000021288 Trav14d-3-dv8A0A075B619 120 aa11.27□□□□□ -0.61
Usp43-201ENSMUST00000021288 Pglyrp4Q0VB07 374 aa11.27□□□□□ -0.61
Usp43-201ENSMUST00000021288 Igkv2-109A0A075B5K6 120 aa11.27□□□□□ -0.61
Usp43-201ENSMUST00000021288 2010109I03RikQ9CQ11 111 aa11.27□□□□□ -0.61
Usp43-201ENSMUST00000021288 Ankrd17Q99NH0 2603 aaKnown RBP11.26□□□□□ -0.61
Usp43-201ENSMUST00000021288 Smim26Q3V460 107 aa11.26□□□□□ -0.61
Usp43-201ENSMUST00000021288 Igkv1-88A0A140T8N1 120 aa11.25□□□□□ -0.61
Usp43-201ENSMUST00000021288 Tm2d2Q8R0I4 213 aa11.25□□□□□ -0.61
Usp43-201ENSMUST00000021288 Ppp1r32Q148A4 427 aa11.25□□□□□ -0.61
Usp43-201ENSMUST00000021288 Gm17472A0A075B683 117 aa11.25□□□□□ -0.61
Usp43-201ENSMUST00000021288 Gm12057A0A087WR21 115 aa11.24□□□□□ -0.61
Usp43-201ENSMUST00000021288 Lgals4Q8K419 326 aa11.24□□□□□ -0.61
Usp43-201ENSMUST00000021288 Gm8439G3UWA7 96 aa11.23□□□□□ -0.61
Usp43-201ENSMUST00000021288 Col4a2P08122 1707 aa11.23□□□□□ -0.61
Usp43-201ENSMUST00000021288 P01823 113 aa11.23□□□□□ -0.61
Usp43-201ENSMUST00000021288 Dph3Q8K0W9 82 aa11.23□□□□□ -0.61
Usp43-201ENSMUST00000021288 Igkv4-78A0A0A6YYE5 119 aa11.23□□□□□ -0.61
Usp43-201ENSMUST00000021288 Gm20726G3UX18 150 aa11.23□□□□□ -0.61
Usp43-201ENSMUST00000021288 Fn1P11276 2477 aaKnown RBP11.22□□□□□ -0.61
Usp43-201ENSMUST00000021288 B230217C12RikE9Q3Z1 139 aa11.22□□□□□ -0.61
Usp43-201ENSMUST00000021288 Foxc1Q61572 553 aa11.22□□□□□ -0.61
Usp43-201ENSMUST00000021288 1700010B08RikQ9DAI7 102 aa11.22□□□□□ -0.61
Usp43-201ENSMUST00000021288 Ly6hQ9WUC3 139 aa11.22□□□□□ -0.61
Usp43-201ENSMUST00000021288 Smim1P0C8K7 78 aa11.21□□□□□ -0.61
Usp43-201ENSMUST00000021288 B230307C23RikQ8BLB2 64 aa11.21□□□□□ -0.61
Usp43-201ENSMUST00000021288 CnfnQ6PCW6 111 aa11.21□□□□□ -0.61
Usp43-201ENSMUST00000021288 A930009A15RikG3UYI6 118 aa11.21□□□□□ -0.62
Usp43-201ENSMUST00000021288 Samd13D3YUG0 102 aa11.21□□□□□ -0.62
Usp43-201ENSMUST00000021288 SbsponQ3UPR9 264 aa11.21□□□□□ -0.62
Usp43-201ENSMUST00000021288 Trav4d-3A0A075B625 110 aa11.2□□□□□ -0.62
Usp43-201ENSMUST00000021288 Trav11A0A0B4J1J9 114 aa11.2□□□□□ -0.62
Usp43-201ENSMUST00000021288 Reg3bP35230 175 aa11.2□□□□□ -0.62
Usp43-201ENSMUST00000021288 Ubl5Q9EPV8 73 aa11.2□□□□□ -0.62
Usp43-201ENSMUST00000021288 Akap13E9Q394 2776 aa11.2□□□□□ -0.62
Usp43-201ENSMUST00000021288 P01745 121 aa11.2□□□□□ -0.62
Usp43-201ENSMUST00000021288 2310009B15RikA0A0A6YWI4 143 aa11.19□□□□□ -0.62
Usp43-201ENSMUST00000021288 AngP21570 145 aa11.19□□□□□ -0.62
Usp43-201ENSMUST00000021288 Ubr5Q80TP3 2792 aa11.18□□□□□ -0.62
Usp43-201ENSMUST00000021288 Wdfy4E9Q2M9 3149 aa11.18□□□□□ -0.62
Usp43-201ENSMUST00000021288 Trav9n-4A0A075B631 113 aa11.17□□□□□ -0.62
Usp43-201ENSMUST00000021288 Gm9767G3X930 207 aa11.17□□□□□ -0.62
Usp43-201ENSMUST00000021288 BB014433Q8C5R5 389 aa11.17□□□□□ -0.62
Usp43-201ENSMUST00000021288 Ighv1-62-1A0A075B5U3 116 aa11.17□□□□□ -0.62
Usp43-201ENSMUST00000021288 Gm3443F7CCV5 94 aa11.17□□□□□ -0.62
Usp43-201ENSMUST00000021288 Gm10300Q8C8P7 189 aa11.17□□□□□ -0.62
Usp43-201ENSMUST00000021288 A0A286YCN5 57 aa11.17□□□□□ -0.62
Usp43-201ENSMUST00000021288 Gm3250E9Q1M3 230 aa11.17□□□□□ -0.62
Usp43-201ENSMUST00000021288 Scgb1b2O35176 93 aa11.17□□□□□ -0.62
Usp43-201ENSMUST00000021288 Cryba4Q9JJV0 196 aa11.17□□□□□ -0.62
Usp43-201ENSMUST00000021288 Ighv8-5A0A0A6YY60 119 aa11.17□□□□□ -0.62
Usp43-201ENSMUST00000021288 BC048502Q80Y74 154 aa11.17□□□□□ -0.62
Usp43-201ENSMUST00000021288 Ighv1-63A0A075B5X2 117 aa11.16□□□□□ -0.62
Usp43-201ENSMUST00000021288 Fgfbp3Q1HCM0 245 aa11.16□□□□□ -0.62
Usp43-201ENSMUST00000021288 Q9DAB9 146 aa11.16□□□□□ -0.62
Usp43-201ENSMUST00000021288 A0A286YE02 88 aa11.15□□□□□ -0.63
Usp43-201ENSMUST00000021288 4930564D02RikQ9D4S4 103 aa11.15□□□□□ -0.63
Usp43-201ENSMUST00000021288 Rpl18aP62717 176 aaKnown RBP11.14□□□□□ -0.63
Usp43-201ENSMUST00000021288 Camk2n2Q78WH7 79 aa11.14□□□□□ -0.63
Usp43-201ENSMUST00000021288 Ighv2-6-8A0A0A6YWY9 116 aa11.14□□□□□ -0.63
Usp43-201ENSMUST00000021288 Esm1Q9QYY7 184 aa11.14□□□□□ -0.63
Usp43-201ENSMUST00000021288 Trav4-3A0A0B4J1K1 110 aa11.14□□□□□ -0.63
Usp43-201ENSMUST00000021288 Fxyd5P97808 178 aa11.14□□□□□ -0.63
Usp43-201ENSMUST00000021288 Gm10251J3QPM5 127 aa11.13□□□□□ -0.63
Usp43-201ENSMUST00000021288 Defa27F2Z403 93 aa11.13□□□□□ -0.63
Usp43-201ENSMUST00000021288 Defb42Q8BVB5 75 aa11.13□□□□□ -0.63
Usp43-201ENSMUST00000021288 P01755 137 aa11.12□□□□□ -0.63
Usp43-201ENSMUST00000021288 9430069I07RikQ9CX21 111 aa11.12□□□□□ -0.63
Usp43-201ENSMUST00000021288 Pla2g1bQ9Z0Y2 146 aa11.12□□□□□ -0.63
Usp43-201ENSMUST00000021288 Wfdc12Q9JHY3 85 aa11.12□□□□□ -0.63
Usp43-201ENSMUST00000021288 Gm10509O88255 85 aa11.11□□□□□ -0.63
Usp43-201ENSMUST00000021288 Rpl32P62911 135 aaKnown RBP11.11□□□□□ -0.63
Usp43-201ENSMUST00000021288 Cd99Q8VCN6 175 aa11.11□□□□□ -0.63
Usp43-201ENSMUST00000021288 Dchs2A0A0A6YW72 3346 aa11.11□□□□□ -0.63
Usp43-201ENSMUST00000021288 Ufsp1Q9CZP0 217 aa11.11□□□□□ -0.63
Usp43-201ENSMUST00000021288 Wfdc15aQ8BH89 80 aa11.1□□□□□ -0.63
Usp43-201ENSMUST00000021288 Spink13Q3UTS8 97 aa11.1□□□□□ -0.63
Usp43-201ENSMUST00000021288 Ighv8-12A0A0G2JDE1 119 aa11.09□□□□□ -0.63
Usp43-201ENSMUST00000021288 Rpl39lQ9CQD0 51 aa11.09□□□□□ -0.63
Usp43-201ENSMUST00000021288 4930535I16RikQ9CUI2 172 aa11.09□□□□□ -0.63
Usp43-201ENSMUST00000021288 Wdr38Q9D994 303 aa11.09□□□□□ -0.63
Usp43-201ENSMUST00000021288 Spry2Q9QXV8 315 aa11.09□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 65.7 ms