RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Lmo4P61969 165 aa13.78□□□□□ -0.2
Ubp1-201ENSMUST00000009885 Spink12Q9D256 87 aa13.78□□□□□ -0.2
Ubp1-201ENSMUST00000009885 Gm10542F6XDR3 90 aa13.78□□□□□ -0.2
Ubp1-201ENSMUST00000009885 Trdv5A0A075B661 115 aa13.78□□□□□ -0.2
Ubp1-201ENSMUST00000009885 Synj2bpQ9D6K5 145 aa13.78□□□□□ -0.2
Ubp1-201ENSMUST00000009885 Hivep2Q3UHF7 2430 aa13.78□□□□□ -0.2
Ubp1-201ENSMUST00000009885 Rif1Q6PR54 2419 aaKnown RBP13.78□□□□□ -0.2
Ubp1-201ENSMUST00000009885 CdsnQ7TPC1 561 aa13.77□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Pfn2Q9JJV2 140 aa13.77□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Ighv2-7A0A075B5Q8 116 aa13.76□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Trav14d-3-dv8A0A075B619 120 aa13.76□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Pglyrp4Q0VB07 374 aa13.76□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Ly6hQ9WUC3 139 aa13.76□□□□□ -0.21
Ubp1-201ENSMUST00000009885 1810032O08RikE9PZV8 113 aa13.76□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Prss58Q8BW11 241 aa13.76□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Ifitm1Q9D103 106 aa13.76□□□□□ -0.21
Ubp1-201ENSMUST00000009885 SelenowP63300 88 aa13.75□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Gatd1Q8BFQ8 220 aa13.75□□□□□ -0.21
Ubp1-201ENSMUST00000009885 CenpwQ3URR0 86 aa13.75□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Defb29Q8BGW9 78 aa13.75□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Bahcc1Q3UHR0 2643 aa13.75□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Gcn1E9PVA8 2671 aaKnown RBP13.75□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Ptpn13Q64512 2453 aa13.75□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Ighv1-72P01751 139 aa13.75□□□□□ -0.21
Ubp1-201ENSMUST00000009885 BC067074F6RXI4 2391 aa13.74□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Morn3Q8C5T4 241 aa13.74□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Trav9d-4A0A0G2JG37 103 aa13.74□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Gm10735Q3US96 136 aa13.74□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Trav9n-2A0A0G2JDP3 113 aa13.73□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Psmb8P28063 276 aa13.73□□□□□ -0.21
Ubp1-201ENSMUST00000009885 4930432M17RikQ3V0W9 174 aa13.72□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Dnal4Q9DCM4 105 aa13.72□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Ighv1-5A0A0A6YWG2 117 aa13.72□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Igkv6-13A0A0G2JGY3 119 aa13.72□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Defa21Q8C1P2 93 aa13.72□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Ube2e2Q91W82 201 aa13.71□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Ighv1-52A0A0A6YXC3 117 aa13.71□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Hbb-b2P02089 147 aa13.71□□□□□ -0.21
Ubp1-201ENSMUST00000009885 Wfdc11A2A5H7 82 aa13.7□□□□□ -0.22
Ubp1-201ENSMUST00000009885 4930442H23RikQ9D5G7 103 aa13.7□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Pkd1l2Q7TN88 2461 aa13.7□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Ighv2-3A0A075B696 115 aa13.69□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Lst1O08843 95 aa13.69□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Igf1P05017 153 aa13.69□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Lama5Q61001 3718 aa13.69□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Gm7102J3QQ10 178 aa13.69□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Gm26661M0QWV4 156 aa13.69□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Igkv1-35A0A0G2JDE5 120 aa13.68□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Scgb1b2O35176 93 aa13.68□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Apoc4Q61268 124 aa13.68□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Bles03Q8VD62 251 aa13.68□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Gm815Q3UWS2 115 aa13.68□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Reg3gO09049 174 aa13.68□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Zfp951A0A087WRH0 451 aa13.67□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Gm10490F6VBM2 120 aa13.67□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Sprr3O09116 238 aa13.67□□□□□ -0.22
Ubp1-201ENSMUST00000009885 AngP21570 145 aa13.67□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Prr9Q8BV84 116 aa13.67□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Ang3P97802 145 aa13.66□□□□□ -0.22
Ubp1-201ENSMUST00000009885 TeppQ6IMH0 216 aa13.66□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Eif4ebp3Q80VV3 101 aa13.66□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Ighv2-6-8A0A0A6YWY9 116 aa13.66□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Ly6gP35461 111 aa13.66□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Gm3618D3Z4P5 127 aa13.66□□□□□ -0.22
Ubp1-201ENSMUST00000009885 P01823 113 aa13.66□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Cops9Q3U898 57 aa13.66□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Gm2916Q9D9B9 127 aa13.66□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Hist1h4aP62806 103 aaKnown RBP13.65□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Xcl1P47993 114 aa13.65□□□□□ -0.22
Ubp1-201ENSMUST00000009885 PemtQ61907 199 aa13.65□□□□□ -0.22
Ubp1-201ENSMUST00000009885 Ighv1-11A0A0A6YWI9 117 aa13.64□□□□□ -0.23
Ubp1-201ENSMUST00000009885 Svep1A2AVA0 3567 aa13.64□□□□□ -0.23
Ubp1-201ENSMUST00000009885 Eif4ebp1Q60876 117 aa13.64□□□□□ -0.23
Ubp1-201ENSMUST00000009885 Ndufa12Q7TMF3 145 aaKnown RBP13.64□□□□□ -0.23
Ubp1-201ENSMUST00000009885 Lce6aD3YV94 81 aa13.63□□□□□ -0.23
Ubp1-201ENSMUST00000009885 Gm9887F6RFI0 207 aa13.63□□□□□ -0.23
Ubp1-201ENSMUST00000009885 Trav11A0A0B4J1J9 114 aa13.63□□□□□ -0.23
Ubp1-201ENSMUST00000009885 MalO09198 153 aa13.63□□□□□ -0.23
Ubp1-201ENSMUST00000009885 P01738 130 aa13.63□□□□□ -0.23
Ubp1-201ENSMUST00000009885 Igkv4-69A0A0B4J1I6 116 aa13.62□□□□□ -0.23
Ubp1-201ENSMUST00000009885 Il19Q8CJ70 176 aa13.61□□□□□ -0.23
Ubp1-201ENSMUST00000009885 1700010B08RikQ9DAI7 102 aa13.61□□□□□ -0.23
Ubp1-201ENSMUST00000009885 Igkv4-78A0A0A6YYE5 119 aa13.61□□□□□ -0.23
Ubp1-201ENSMUST00000009885 Myo9aQ8C170 2542 aa13.61□□□□□ -0.23
Ubp1-201ENSMUST00000009885 Abca12E9Q876 2595 aa13.61□□□□□ -0.23
Ubp1-201ENSMUST00000009885 PlaurP35456 327 aa13.61□□□□□ -0.23
Ubp1-201ENSMUST00000009885 3110070M22RikQ9DAQ7 118 aa13.61□□□□□ -0.23
Ubp1-201ENSMUST00000009885 Igkv4-62A0A0G2JDW9 117 aa13.6□□□□□ -0.23
Ubp1-201ENSMUST00000009885 B230217C12RikE9Q3Z1 139 aa13.6□□□□□ -0.23
Ubp1-201ENSMUST00000009885 Gm9922Q8C3P1 144 aa13.6□□□□□ -0.23
Ubp1-201ENSMUST00000009885 Gm9747Q810H1 104 aa13.6□□□□□ -0.23
Ubp1-201ENSMUST00000009885 5730596B20RikQ8BQ08 205 aa13.6□□□□□ -0.23
Ubp1-201ENSMUST00000009885 Gm7257D3YX25 99 aa13.6□□□□□ -0.23
Ubp1-201ENSMUST00000009885 9430069I07RikQ9CX21 111 aa13.6□□□□□ -0.23
Ubp1-201ENSMUST00000009885 Sh2d1aO88890 126 aa13.59□□□□□ -0.23
Ubp1-201ENSMUST00000009885 Esm1Q9QYY7 184 aa13.59□□□□□ -0.23
Ubp1-201ENSMUST00000009885 Naa38Q9D2U5 125 aa13.59□□□□□ -0.23
Ubp1-201ENSMUST00000009885 Trav13-4-dv7A0A075B6C2 110 aa13.59□□□□□ -0.23
Ubp1-201ENSMUST00000009885 Rpl36aP83882 106 aaKnown RBP13.59□□□□□ -0.23
Ubp1-201ENSMUST00000009885 Wfdc15aQ8BH89 80 aa13.59□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 48.9 ms