RNA–Protein interactions for RNA: ENSMUST00000199079.1

Rpf1-203, Transcript of Ribosome production factor 1, mousemouse

TSL 1 (best) BASIC

Gene Rpf1, Length 1,978 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-203ENSMUST00000199079 Tspan13Q9D8C2 204 aa12.47□□□□□ -0.41
Rpf1-203ENSMUST00000199079 FlnbQ80X90 2602 aaKnown RBP12.47□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Ly86O88188 162 aa12.47□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Samd5Q3V1H9 173 aa12.47□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Triap1Q9D8Z2 76 aa12.47□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Nbeal1E9PYP2 2688 aa12.46□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Atp6v0e2Q91XE7 81 aa12.46□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Ankrd39Q9D2X0 183 aa12.46□□□□□ -0.41
Rpf1-203ENSMUST00000199079 Rif1Q6PR54 2419 aaKnown RBP12.46□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Abca12E9Q876 2595 aa12.46□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Ankhd1E9PUR0 2548 aaKnown RBP12.46□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Igkv4-68A0A0B4J1I7 117 aa12.45□□□□□ -0.42
Rpf1-203ENSMUST00000199079 PolP10400 120 aa12.45□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Lrcol1Q3URS3 161 aa12.45□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Armcx4E9PWM3 2356 aa12.45□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Col6a4A2AX52 2309 aa12.45□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Hoxd3P09027 433 aa12.45□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Fgfbp3Q1HCM0 245 aa12.45□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Mpv17l2Q8VIK2 200 aa12.45□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Gm9195A0A140LHT4 2805 aa12.44□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Gm10490F6VBM2 120 aa12.44□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Gm10509O88255 85 aa12.44□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Sap30O88574 220 aa12.44□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Defa3P28310 93 aa12.44□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Defa10P50708 93 aa12.44□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Defa15P50713 93 aa12.44□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Gatd1Q8BFQ8 220 aa12.44□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Gm29666A0A087WQ99 126 aa12.43□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Gm28044L7N1X0 119 aa12.43□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Ifi27l2aQ8R412 90 aa12.43□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Tmem263Q9DAM7 115 aa12.43□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Trbv30A0A0B4J1P1 111 aa12.42□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Gm6793B2RXM2 351 aa12.42□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Ang3P97802 145 aa12.42□□□□□ -0.42
Rpf1-203ENSMUST00000199079 NrepQ07475 68 aa12.42□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Sigmar1O55242 223 aa12.41□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Trav7d-3Q5R1I1 112 aa12.41□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Trav3-1Q5R1I8 114 aa12.41□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Atp5lQ9CPQ8 103 aa12.41□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Tcrg-C1A0A075B5Z0 172 aa12.41□□□□□ -0.42
Rpf1-203ENSMUST00000199079 A530064D06RikQ8BNV8 229 aa12.41□□□□□ -0.42
Rpf1-203ENSMUST00000199079 SonQ9QX47 2444 aaKnown RBP12.4□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Tmem238A9JSM3 176 aa12.4□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Gm933J3QPC1 141 aa12.4□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Reg3gO09049 174 aa12.4□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Fam19a4Q7TPG5 135 aa12.4□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Mrpl35Q9CQL6 188 aa12.4□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Epg5Q80TA9 2572 aa12.4□□□□□ -0.42
Rpf1-203ENSMUST00000199079 Klhdc1Q80YG3 406 aa12.39□□□□□ -0.43
Rpf1-203ENSMUST00000199079 BC106179Q8C9L1 186 aa12.39□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Spag11Q8K4N2 71 aa12.39□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Ucn2Q99ML8 113 aa12.39□□□□□ -0.43
Rpf1-203ENSMUST00000199079 3110070M22RikQ9DAQ7 118 aa12.39□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Klk1b4P00757 256 aa12.39□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Qrich2A0A140LIY9 2337 aa12.38□□□□□ -0.43
Rpf1-203ENSMUST00000199079 B230217C12RikE9Q3Z1 139 aa12.38□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Eif4ebp1Q60876 117 aa12.38□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Cfap126Q6P8X9 189 aa12.38□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Rnf183Q8QZS5 190 aa12.38□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Il1f10Q8R459 152 aa12.38□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Gm10322F7D7I4 111 aa12.38□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Gm8439G3UWA7 96 aa12.38□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Gata1P17679 413 aa12.38□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Rnf152Q8BG47 203 aa12.37□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Gm9913Q8BQQ2 135 aa12.37□□□□□ -0.43
Rpf1-203ENSMUST00000199079 4930442H23RikQ9D5G7 103 aa12.37□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Ndufs7Q9DC70 224 aa12.37□□□□□ -0.43
Rpf1-203ENSMUST00000199079 HilpdaQ9JLS0 64 aa12.37□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Ighv1-11A0A0A6YWI9 117 aa12.36□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Ighv1-72P01751 139 aa12.36□□□□□ -0.43
Rpf1-203ENSMUST00000199079 P01786 117 aa12.36□□□□□ -0.43
Rpf1-203ENSMUST00000199079 CckP09240 115 aa12.36□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Morn5Q9DAI9 170 aa12.36□□□□□ -0.43
Rpf1-203ENSMUST00000199079 C920008G01RikA0A0B4J1N1 112 aa12.35□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Rpl13aP19253 203 aaKnown RBP12.35□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Ccl21aP84444 133 aa12.35□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Ccl21bP86792 133 aa12.35□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Ccl21cP86793 133 aa12.35□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Lect2O88803 151 aa12.34□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Fam110dQ80X91 271 aa12.34□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Trav4-3A0A0B4J1K1 110 aa12.34□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Mfap4Q9D1H9 257 aa12.34□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Phlda3Q9WV95 125 aa12.34□□□□□ -0.43
Rpf1-203ENSMUST00000199079 Gm35549A0A0N4SUS7 141 aa12.33□□□□□ -0.44
Rpf1-203ENSMUST00000199079 NpwA0A1L1STR8 176 aa12.33□□□□□ -0.44
Rpf1-203ENSMUST00000199079 Gm5819E9PZ96 154 aa12.33□□□□□ -0.44
Rpf1-203ENSMUST00000199079 OdaphJ3QNT8 126 aa12.33□□□□□ -0.44
Rpf1-203ENSMUST00000199079 Ifitm10Q8BR26 201 aa12.33□□□□□ -0.44
Rpf1-203ENSMUST00000199079 Gm9936Q8C864 160 aa12.33□□□□□ -0.44
Rpf1-203ENSMUST00000199079 Klk5Q9D140 293 aa12.33□□□□□ -0.44
Rpf1-203ENSMUST00000199079 4930470P17RikQ9D542 155 aa12.33□□□□□ -0.44
Rpf1-203ENSMUST00000199079 Helz2E9QAM5 2947 aaKnown RBP12.33□□□□□ -0.44
Rpf1-203ENSMUST00000199079 C2cd3Q52KB6 2323 aa12.32□□□□□ -0.44
Rpf1-203ENSMUST00000199079 Sorl1O88307 2215 aaKnown RBP12.32□□□□□ -0.44
Rpf1-203ENSMUST00000199079 Gm17472A0A075B683 117 aa12.32□□□□□ -0.44
Rpf1-203ENSMUST00000199079 Gm12057A0A087WR21 115 aa12.32□□□□□ -0.44
Rpf1-203ENSMUST00000199079 P01811 117 aa12.32□□□□□ -0.44
Rpf1-203ENSMUST00000199079 Rpl32-psP17932 135 aa12.32□□□□□ -0.44
Rpf1-203ENSMUST00000199079 Cep192E9Q4Y4 2514 aaKnown RBP12.32□□□□□ -0.44
Rpf1-203ENSMUST00000199079 Myo18bE9PV66 2605 aa12.31□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 40.7 ms