RNA–Protein interactions for RNA: ENSMUST00000112070.7

Col7a1-202, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col7a1, Length 9,250 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-202ENSMUST00000112070 Psmb8P28063 276 aa11.03□□□□□ -0.64
Col7a1-202ENSMUST00000112070 3110021N24RikJ3QMN2 152 aa11.03□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Gm17455G3UW87 128 aa11.03□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Ccl24Q9JKC0 119 aa11.03□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Igkv8-21A0A140T8P7 120 aa11.02□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Igkv12-89A0A0G2JGW8 112 aa11.02□□□□□ -0.64
Col7a1-202ENSMUST00000112070 P01789 122 aa11.02□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Fstl3Q9EQC7 256 aa11.02□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Gm9970F6ZED4 185 aa11.02□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Gm9961Q8BNV2 113 aa11.02□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Msrb3Q8BU85 253 aa11.02□□□□□ -0.65
Col7a1-202ENSMUST00000112070 P04940 107 aa11.02□□□□□ -0.65
Col7a1-202ENSMUST00000112070 P04941 107 aa11.02□□□□□ -0.65
Col7a1-202ENSMUST00000112070 P01791 123 aa11.01□□□□□ -0.65
Col7a1-202ENSMUST00000112070 ElnP54320 860 aa11.01□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Defb12Q8K4N3 78 aa11.01□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Gm17577J3QNF7 156 aa11.01□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Igkv3-3A0A140T8Q0 119 aa11.01□□□□□ -0.65
Col7a1-202ENSMUST00000112070 9530003J23RikQ8BM26 151 aa11.01□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Ly6c1P0CW02 131 aa11.01□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Ighv13-2A0A0A6YWN3 119 aa11.01□□□□□ -0.65
Col7a1-202ENSMUST00000112070 UrahQ9CRB3 118 aa11.01□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Loxl1P97873 607 aa11□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Ppp1r32Q148A4 427 aa11□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Fhl4Q8CDC8 279 aa11□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Gp9O88186 177 aa11□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Sptbn4E9PX29 2561 aa11□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Hivep2Q3UHF7 2430 aa11□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Znrd1Q791N7 123 aa10.99□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Gm19935A0A1B0GSF9 52 aa10.99□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Gm12253Q5NC48 229 aa10.99□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Zc2hc1aQ8BJH1 324 aa10.99□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Mrpl35Q9CQL6 188 aa10.99□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Q80X32 188 aaKnown RBP10.99□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Fam110dQ80X91 271 aa10.99□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Gm16503Q8C6M9 103 aa10.98□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Gm10401E9Q3K6 71 aa10.98□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Tm2d1Q99MB3 208 aa10.98□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Gm17472A0A075B683 117 aa10.98□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Ighv2-6A0A075B6A7 116 aa10.98□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Ighv1-12A0A0A6YXJ9 117 aa10.98□□□□□ -0.65
Col7a1-202ENSMUST00000112070 H2al1kJ3QP08 105 aa10.98□□□□□ -0.65
Col7a1-202ENSMUST00000112070 NpwA0A1L1STR8 176 aa10.98□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Cfc1P97766 202 aa10.98□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Notch2O35516 2470 aa10.98□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Serp2Q6TAW2 65 aa10.98□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Zfp36P22893 319 aaKnown RBP10.97□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Zfyve26Q5DU37 2529 aa10.97□□□□□ -0.65
Col7a1-202ENSMUST00000112070 BlcapP62951 87 aa10.97□□□□□ -0.65
Col7a1-202ENSMUST00000112070 CrygcQ61597 174 aa10.97□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Cfap126Q6P8X9 189 aa10.97□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Rnf152Q8BG47 203 aa10.97□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Kmt2bO08550 2713 aa10.97□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Trav9d-3A0A075B695 113 aa10.97□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Klk12B2RVZ0 247 aa10.96□□□□□ -0.65
Col7a1-202ENSMUST00000112070 P84750 121 aa10.96□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Nxph4G3X9N5 304 aa10.96□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Vopp1Q8R1C3 172 aa10.96□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Ighv10-1A0A0B4J1J6 119 aa10.96□□□□□ -0.65
Col7a1-202ENSMUST00000112070 C920008G01RikA0A0B4J1N1 112 aa10.96□□□□□ -0.65
Col7a1-202ENSMUST00000112070 Ighv1-61P01749 117 aa10.96□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Igkv1-88A0A140T8N1 120 aa10.96□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Gm14137Q8CE97 175 aa10.95□□□□□ -0.66
Col7a1-202ENSMUST00000112070 P04942 107 aa10.95□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Igkv2-109A0A075B5K6 120 aa10.95□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Ighv1-11A0A0A6YWI9 117 aa10.95□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Tnfrsf13bQ9ET35 249 aa10.95□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Col4a5Q63ZW6 1691 aa10.95□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Serp1Q9Z1W5 66 aa10.95□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Cox7a1P56392 80 aa10.95□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Rpl39lQ9CQD0 51 aa10.95□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Gm17521F6QAC8 156 aa10.95□□□□□ -0.66
Col7a1-202ENSMUST00000112070 P01750 117 aa10.95□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Gm7257D3YX25 99 aa10.94□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Ttc28Q80XJ3 2450 aa10.94□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Dazap2Q9DCP9 168 aa10.94□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Q08AU9 97 aa10.94□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Fancd2osQ9D4K4 178 aa10.93□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Gm10762Q9CZN6 115 aa10.93□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Defb13Q8R2I4 64 aa10.93□□□□□ -0.66
Col7a1-202ENSMUST00000112070 P04945 108 aa10.93□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Cd24P24807 76 aa10.93□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Fhl1P97447 280 aaKnown RBP10.93□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Ntf4Q80VU4 209 aa10.93□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Rspo1Q9Z132 265 aa10.93□□□□□ -0.66
Col7a1-202ENSMUST00000112070 A830031A19RikQ8BNT5 113 aa10.92□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Wfdc9Q3UW41 83 aa10.92□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Gm15217A2CG07 155 aa10.92□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Tln1P26039 2541 aaKnown RBP10.92□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Igkv4-92A0A0B4J1I2 117 aa10.92□□□□□ -0.66
Col7a1-202ENSMUST00000112070 P01753 117 aa10.92□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Reg3bP35230 175 aa10.92□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Timm17bQ9Z0V7 172 aa10.91□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Trav14-1A0A0G2JF94 121 aa10.91□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Pla2g2aP31482 146 aa10.91□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Ube2d4D3YUH6 135 aa10.91□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Wisp3D3Z5L9 354 aa10.91□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Prok1Q14A28 105 aa10.91□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Ighv1-62-1A0A075B5U3 116 aa10.9□□□□□ -0.66
Col7a1-202ENSMUST00000112070 Igkv1-35A0A0G2JDE5 120 aa10.9□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 176.1 ms