RNA–Protein interactions for RNA: ENSMUST00000112070.7

Col7a1-202, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col7a1, Length 9,250 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-202ENSMUST00000112070 Rhox8Q6VSS7 320 aa23.7■■□□□ 1.39
Col7a1-202ENSMUST00000112070 Rpgrip1Q9EPQ2 1331 aa23.49■■□□□ 1.35
Col7a1-202ENSMUST00000112070 Cngb1E1AZ71 1325 aa23.27■■□□□ 1.32
Col7a1-202ENSMUST00000112070 Las1lA2BE28 776 aaKnown RBP22.99■■□□□ 1.27
Col7a1-202ENSMUST00000112070 Pelp1Q9DBD5 1123 aaKnown RBP22.95■■□□□ 1.26
Col7a1-202ENSMUST00000112070 Wdr66E9Q743 1299 aa21.96■■□□□ 1.11
Col7a1-202ENSMUST00000112070 Rtl1Q7M732 1744 aa21.66■■□□□ 1.06
Col7a1-202ENSMUST00000112070 Amer1Q7TS75 1132 aa21.59■■□□□ 1.05
Col7a1-202ENSMUST00000112070 4930567H17RikQ3V0K5 233 aa21.52■■□□□ 1.04
Col7a1-202ENSMUST00000112070 CenpbP27790 599 aa21.48■■□□□ 1.03
Col7a1-202ENSMUST00000112070 Stra8P70278 393 aa21.44■■□□□ 1.02
Col7a1-202ENSMUST00000112070 Myt1Q8CFC2 1127 aa21.36■■□□□ 1.01
Col7a1-202ENSMUST00000112070 Ube2uB1AUC4 352 aa21.34■■□□□ 1.01
Col7a1-202ENSMUST00000112070 Ehmt2Q9Z148 1263 aaKnown RBP21.19■□□□□ 0.98
Col7a1-202ENSMUST00000112070 Zeb1Q64318 1117 aa21.14■□□□□ 0.98
Col7a1-202ENSMUST00000112070 Ccdc180J3QNE4 1664 aa21.11■□□□□ 0.97
Col7a1-202ENSMUST00000112070 Esf1Q3V1V3 845 aaKnown RBP21.02■□□□□ 0.96
Col7a1-202ENSMUST00000112070 NefmP08553 848 aa20.89■□□□□ 0.94
Col7a1-202ENSMUST00000112070 Trim41Q5NCC3 630 aa20.83■□□□□ 0.93
Col7a1-202ENSMUST00000112070 Npm2Q80W85 207 aa20.79■□□□□ 0.92
Col7a1-202ENSMUST00000112070 Acin1Q9JIX8 1338 aaKnown RBP20.64■□□□□ 0.89
Col7a1-202ENSMUST00000112070 Ccdc136Q3TVA9 1136 aa20.64■□□□□ 0.89
Col7a1-202ENSMUST00000112070 Tnnt3Q9QZ47 272 aa20.61■□□□□ 0.89
Col7a1-202ENSMUST00000112070 Rtl5Q5DTT4 599 aa20.6■□□□□ 0.89
Col7a1-202ENSMUST00000112070 NeflP08551 543 aa20.54■□□□□ 0.88
Col7a1-202ENSMUST00000112070 4933416C03RikQ3V063 378 aa20.53■□□□□ 0.88
Col7a1-202ENSMUST00000112070 Anp32bQ9EST5 272 aaKnown RBP20.51■□□□□ 0.87
Col7a1-202ENSMUST00000112070 Gab3Q8BSM5 595 aa20.4■□□□□ 0.86
Col7a1-202ENSMUST00000112070 Ttbk1Q6PCN3 1308 aa20.38■□□□□ 0.85
Col7a1-202ENSMUST00000112070 Myt1lP97500 1187 aa20.37■□□□□ 0.85
Col7a1-202ENSMUST00000112070 Cdk11bP24788 784 aaKnown RBP20.33■□□□□ 0.85
Col7a1-202ENSMUST00000112070 NrdcQ8BHG1 1161 aa20.28■□□□□ 0.84
Col7a1-202ENSMUST00000112070 Slc24a1Q91WD8 1130 aa20.24■□□□□ 0.83
Col7a1-202ENSMUST00000112070 NischQ80TM9 1593 aa20.22■□□□□ 0.83
Col7a1-202ENSMUST00000112070 UbtfP25976 765 aaKnown RBP20.08■□□□□ 0.8
Col7a1-202ENSMUST00000112070 HrcG5E8J6 738 aa20.06■□□□□ 0.8
Col7a1-202ENSMUST00000112070 Nop58Q6DFW4 536 aaKnown RBP19.92■□□□□ 0.78
Col7a1-202ENSMUST00000112070 NclP09405 707 aaKnown RBP19.84■□□□□ 0.77
Col7a1-202ENSMUST00000112070 DiexfQ8BTT6 772 aaKnown RBP19.78■□□□□ 0.76
Col7a1-202ENSMUST00000112070 Pcgf6Q99NA9 353 aa19.74■□□□□ 0.75
Col7a1-202ENSMUST00000112070 Neurod1Q60867 357 aa19.71■□□□□ 0.75
Col7a1-202ENSMUST00000112070 Ythdc1E9Q5K9 736 aaKnown RBP19.69■□□□□ 0.74
Col7a1-202ENSMUST00000112070 Os9Q8K2C7 672 aa19.67■□□□□ 0.74
Col7a1-202ENSMUST00000112070 Eif5bQ05D44 1216 aaKnown RBP19.65■□□□□ 0.74
Col7a1-202ENSMUST00000112070 Anp32aO35381 247 aa19.61■□□□□ 0.73
Col7a1-202ENSMUST00000112070 TonslQ6NZL6 1363 aa19.59■□□□□ 0.73
Col7a1-202ENSMUST00000112070 Fam50aQ9WV03 339 aaKnown RBP19.56■□□□□ 0.72
Col7a1-202ENSMUST00000112070 DaxxO35613 739 aa19.53■□□□□ 0.72
Col7a1-202ENSMUST00000112070 Ccdc9Q8VC31 543 aaKnown RBP19.47■□□□□ 0.71
Col7a1-202ENSMUST00000112070 Hdac5Q9Z2V6 1113 aa19.44■□□□□ 0.7
Col7a1-202ENSMUST00000112070 CatipB9EKE5 520 aa19.4■□□□□ 0.7
Col7a1-202ENSMUST00000112070 ClspnQ80YR7 1315 aa19.31■□□□□ 0.68
Col7a1-202ENSMUST00000112070 Upf2A2AT37 1269 aaKnown RBP19.25■□□□□ 0.67
Col7a1-202ENSMUST00000112070 Il27Q8K3I6 234 aa19.16■□□□□ 0.66
Col7a1-202ENSMUST00000112070 Nlrp6Q91WS2 869 aa19.14■□□□□ 0.65
Col7a1-202ENSMUST00000112070 Hsp90aa1P07901 733 aaKnown RBP19.12■□□□□ 0.65
Col7a1-202ENSMUST00000112070 Supt5hO55201 1082 aaKnown RBP19.12■□□□□ 0.65
Col7a1-202ENSMUST00000112070 Zcchc6Q5BLK4 1491 aaKnown RBP19.04■□□□□ 0.64
Col7a1-202ENSMUST00000112070 Ap3b1Q9Z1T1 1105 aa19.02■□□□□ 0.64
Col7a1-202ENSMUST00000112070 Aplp2Q06335 707 aa18.94■□□□□ 0.62
Col7a1-202ENSMUST00000112070 Trim44Q9QXA7 346 aa18.93■□□□□ 0.62
Col7a1-202ENSMUST00000112070 Gm13697A2AK42 830 aa18.9■□□□□ 0.62
Col7a1-202ENSMUST00000112070 Mier1Q5UAK0 511 aa18.89■□□□□ 0.61
Col7a1-202ENSMUST00000112070 Adam1bQ8R534 806 aa18.88■□□□□ 0.61
Col7a1-202ENSMUST00000112070 Anks4bQ8K3X6 423 aa18.87■□□□□ 0.61
Col7a1-202ENSMUST00000112070 Ccer2J3QPU5 274 aa18.85■□□□□ 0.61
Col7a1-202ENSMUST00000112070 Polr3glQ8R0C0 218 aa18.81■□□□□ 0.6
Col7a1-202ENSMUST00000112070 Hnrnpul2Q00PI9 745 aaKnown RBP18.77■□□□□ 0.6
Col7a1-202ENSMUST00000112070 Lmod3E9QA62 571 aa18.76■□□□□ 0.59
Col7a1-202ENSMUST00000112070 Calr4Q3TQS0 420 aa18.73■□□□□ 0.59
Col7a1-202ENSMUST00000112070 Ppargc1bQ8VHJ7 1014 aa18.72■□□□□ 0.59
Col7a1-202ENSMUST00000112070 DekQ7TNV0 380 aaKnown RBP18.71■□□□□ 0.59
Col7a1-202ENSMUST00000112070 Htatsf1Q8BGC0 757 aa18.68■□□□□ 0.58
Col7a1-202ENSMUST00000112070 Atp1b4Q99ME6 356 aa18.66■□□□□ 0.58
Col7a1-202ENSMUST00000112070 Dcaf1Q80TR8 1506 aa18.66■□□□□ 0.58
Col7a1-202ENSMUST00000112070 ArxO35085 564 aa18.66■□□□□ 0.58
Col7a1-202ENSMUST00000112070 Wdr43Q6ZQL4 677 aaKnown RBP18.65■□□□□ 0.58
Col7a1-202ENSMUST00000112070 Gm13695A2AK44 830 aa18.64■□□□□ 0.57
Col7a1-202ENSMUST00000112070 Ppp4r2Q0VGB7 417 aa18.61■□□□□ 0.57
Col7a1-202ENSMUST00000112070 Erich6D3Z6S9 713 aa18.59■□□□□ 0.57
Col7a1-202ENSMUST00000112070 Npm1Q61937 292 aaKnown RBP18.58■□□□□ 0.56
Col7a1-202ENSMUST00000112070 Chic1Q8CBW7 227 aa18.56■□□□□ 0.56
Col7a1-202ENSMUST00000112070 Znf326O88291 580 aa18.54■□□□□ 0.56
Col7a1-202ENSMUST00000112070 PtmaP26350 111 aa18.52■□□□□ 0.56
Col7a1-202ENSMUST00000112070 Zbtb7cQ8VCZ7 619 aa18.51■□□□□ 0.55
Col7a1-202ENSMUST00000112070 Abcc9P70170 1546 aa18.51■□□□□ 0.55
Col7a1-202ENSMUST00000112070 Ccdc27Q3V036 639 aa18.49■□□□□ 0.55
Col7a1-202ENSMUST00000112070 Hsp90ab1P11499 724 aaKnown RBP18.48■□□□□ 0.55
Col7a1-202ENSMUST00000112070 Fgd1P52734 960 aa18.48■□□□□ 0.55
Col7a1-202ENSMUST00000112070 Brd4Q9ESU6 1400 aaKnown RBP18.47■□□□□ 0.55
Col7a1-202ENSMUST00000112070 Calcoco2A2A6M5 331 aa18.47■□□□□ 0.55
Col7a1-202ENSMUST00000112070 Tnnt2P50752 301 aa18.47■□□□□ 0.55
Col7a1-202ENSMUST00000112070 Csrnp3P59055 597 aa18.46■□□□□ 0.55
Col7a1-202ENSMUST00000112070 Chmp4bQ9D8B3 224 aaKnown RBP18.46■□□□□ 0.55
Col7a1-202ENSMUST00000112070 Plekhg3Q4VAC9 1341 aa18.46■□□□□ 0.55
Col7a1-202ENSMUST00000112070 Clstn2Q9ER65 966 aa18.43■□□□□ 0.54
Col7a1-202ENSMUST00000112070 PnnO35691 725 aaKnown RBP18.41■□□□□ 0.54
Col7a1-202ENSMUST00000112070 Cep164Q5DU05 1446 aa18.41■□□□□ 0.54
Col7a1-202ENSMUST00000112070 CanxP35564 591 aaKnown RBP18.41■□□□□ 0.54
Col7a1-202ENSMUST00000112070 Lmod2Q3UHZ5 550 aa18.41■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms