RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 A530064D06RikQ8BNV8 229 aa13.98□□□□□ -0.17
Lig3-209ENSMUST00000173009 Snx22Q8C084 192 aa13.98□□□□□ -0.17
Lig3-209ENSMUST00000173009 Gm9944Q8C559 102 aa13.98□□□□□ -0.17
Lig3-209ENSMUST00000173009 Q9D131 166 aa13.98□□□□□ -0.17
Lig3-209ENSMUST00000173009 Zc2hc1bQ9D534 172 aa13.98□□□□□ -0.17
Lig3-209ENSMUST00000173009 P01791 123 aa13.97□□□□□ -0.17
Lig3-209ENSMUST00000173009 Cox17P56394 63 aa13.96□□□□□ -0.17
Lig3-209ENSMUST00000173009 PmvkQ9D1G2 192 aa13.96□□□□□ -0.17
Lig3-209ENSMUST00000173009 Tmem239Q9DA47 151 aa13.96□□□□□ -0.17
Lig3-209ENSMUST00000173009 Tmem140Q8BGY5 185 aa13.96□□□□□ -0.18
Lig3-209ENSMUST00000173009 Trav14-3A0A075B607 120 aa13.95□□□□□ -0.18
Lig3-209ENSMUST00000173009 Gm10647E9Q8X0 124 aa13.95□□□□□ -0.18
Lig3-209ENSMUST00000173009 Ammecr1lQ8JZZ6 310 aa13.95□□□□□ -0.18
Lig3-209ENSMUST00000173009 Gm17509Q9CZ61 145 aa13.95□□□□□ -0.18
Lig3-209ENSMUST00000173009 Gm5157A0A087WRH8 301 aa13.94□□□□□ -0.18
Lig3-209ENSMUST00000173009 SriQ6P069 198 aa13.94□□□□□ -0.18
Lig3-209ENSMUST00000173009 Rab5aQ9CQD1 215 aa13.94□□□□□ -0.18
Lig3-209ENSMUST00000173009 Klf13Q9JJZ6 289 aa13.94□□□□□ -0.18
Lig3-209ENSMUST00000173009 Csmd3Q80T79 3707 aa13.94□□□□□ -0.18
Lig3-209ENSMUST00000173009 Igkv4-91A0A075B5L2 119 aa13.94□□□□□ -0.18
Lig3-209ENSMUST00000173009 Gm10251J3QPM5 127 aa13.94□□□□□ -0.18
Lig3-209ENSMUST00000173009 P06334 169 aa13.94□□□□□ -0.18
Lig3-209ENSMUST00000173009 CirbpP60824 172 aaKnown RBP13.94□□□□□ -0.18
Lig3-209ENSMUST00000173009 Trav9d-3A0A075B695 113 aa13.93□□□□□ -0.18
Lig3-209ENSMUST00000173009 Dmrt3Q80WT2 476 aa13.93□□□□□ -0.18
Lig3-209ENSMUST00000173009 CcsQ9WU84 274 aa13.93□□□□□ -0.18
Lig3-209ENSMUST00000173009 Trav3n-3A0A0G2JEM0 114 aa13.92□□□□□ -0.18
Lig3-209ENSMUST00000173009 Gng7Q61016 68 aa13.92□□□□□ -0.18
Lig3-209ENSMUST00000173009 Igkv4-61A0A0G2JH00 117 aa13.91□□□□□ -0.18
Lig3-209ENSMUST00000173009 LalbaP29752 143 aa13.91□□□□□ -0.18
Lig3-209ENSMUST00000173009 Mllt11P97783 90 aa13.91□□□□□ -0.18
Lig3-209ENSMUST00000173009 Trav12d-3A0A075B6A4 115 aa13.91□□□□□ -0.18
Lig3-209ENSMUST00000173009 Ormdl3Q9CPZ6 153 aa13.91□□□□□ -0.18
Lig3-209ENSMUST00000173009 Pradc1Q9D9N8 188 aa13.91□□□□□ -0.18
Lig3-209ENSMUST00000173009 Shisal1Q0VBP7 198 aa13.9□□□□□ -0.18
Lig3-209ENSMUST00000173009 Gm16223Q8CBM3 117 aa13.9□□□□□ -0.18
Lig3-209ENSMUST00000173009 Gm20379A0A087WR34 119 aa13.89□□□□□ -0.19
Lig3-209ENSMUST00000173009 AW011738F6S7Q2 159 aa13.89□□□□□ -0.19
Lig3-209ENSMUST00000173009 Fgfbp3Q1HCM0 245 aa13.89□□□□□ -0.19
Lig3-209ENSMUST00000173009 A930004D18RikQ8C8W7 157 aa13.89□□□□□ -0.19
Lig3-209ENSMUST00000173009 Urm1Q9D2P4 101 aa13.89□□□□□ -0.19
Lig3-209ENSMUST00000173009 Ighv1-85A0A075B5Y6 117 aa13.88□□□□□ -0.19
Lig3-209ENSMUST00000173009 Mmp23O88676 391 aa13.88□□□□□ -0.19
Lig3-209ENSMUST00000173009 AamdcQ8R0P4 122 aa13.88□□□□□ -0.19
Lig3-209ENSMUST00000173009 Trav13-1A0A075B644 110 aa13.87□□□□□ -0.19
Lig3-209ENSMUST00000173009 Gm21834J3QN05 151 aa13.87□□□□□ -0.19
Lig3-209ENSMUST00000173009 Spink4O35679 86 aa13.87□□□□□ -0.19
Lig3-209ENSMUST00000173009 Adcyap1O70176 175 aa13.87□□□□□ -0.19
Lig3-209ENSMUST00000173009 P06329 120 aa13.87□□□□□ -0.19
Lig3-209ENSMUST00000173009 SstP60041 116 aa13.87□□□□□ -0.19
Lig3-209ENSMUST00000173009 Tmem101Q91VP7 257 aa13.87□□□□□ -0.19
Lig3-209ENSMUST00000173009 Dnah17Q69Z23 4481 aa13.87□□□□□ -0.19
Lig3-209ENSMUST00000173009 Zfp930A0A1D5RM15 441 aa13.86□□□□□ -0.19
Lig3-209ENSMUST00000173009 Gm20517G3UVU6 152 aa13.86□□□□□ -0.19
Lig3-209ENSMUST00000173009 Scgb2a2J3KMP9 96 aa13.86□□□□□ -0.19
Lig3-209ENSMUST00000173009 Cox7a1P56392 80 aa13.86□□□□□ -0.19
Lig3-209ENSMUST00000173009 RfxapQ8VCG9 231 aa13.86□□□□□ -0.19
Lig3-209ENSMUST00000173009 Olfr984Q8VFN1 314 aa13.86□□□□□ -0.19
Lig3-209ENSMUST00000173009 Arl14eplQ3UKZ7 152 aa13.86□□□□□ -0.19
Lig3-209ENSMUST00000173009 Gm9936Q8C864 160 aa13.86□□□□□ -0.19
Lig3-209ENSMUST00000173009 Tcf24V9GWT9 166 aa13.86□□□□□ -0.19
Lig3-209ENSMUST00000173009 Stab2Q8R4U0 2559 aa13.85□□□□□ -0.19
Lig3-209ENSMUST00000173009 Gm12057A0A087WR21 115 aa13.85□□□□□ -0.19
Lig3-209ENSMUST00000173009 Rpl36aP83882 106 aaKnown RBP13.85□□□□□ -0.19
Lig3-209ENSMUST00000173009 PrcdQ00LT2 53 aa13.85□□□□□ -0.19
Lig3-209ENSMUST00000173009 Mapk1ip1Q9D7G9 263 aa13.85□□□□□ -0.19
Lig3-209ENSMUST00000173009 Ighv8-5A0A0A6YY60 119 aa13.84□□□□□ -0.19
Lig3-209ENSMUST00000173009 Gata1P17679 413 aa13.84□□□□□ -0.19
Lig3-209ENSMUST00000173009 PdpnQ62011 172 aa13.84□□□□□ -0.19
Lig3-209ENSMUST00000173009 Ube2cQ9D1C1 179 aa13.84□□□□□ -0.19
Lig3-209ENSMUST00000173009 NpwA0A1L1STR8 176 aa13.83□□□□□ -0.19
Lig3-209ENSMUST00000173009 Gm9507D3Z5T3 223 aa13.83□□□□□ -0.19
Lig3-209ENSMUST00000173009 Sdhaf1Q3U276 118 aa13.83□□□□□ -0.19
Lig3-209ENSMUST00000173009 Q8CF25 301 aa13.83□□□□□ -0.19
Lig3-209ENSMUST00000173009 Gm45623A0A1B0GSF6 103 aa13.83□□□□□ -0.2
Lig3-209ENSMUST00000173009 Zfp867E9Q2M4 473 aa13.83□□□□□ -0.2
Lig3-209ENSMUST00000173009 Ly6gP35461 111 aa13.83□□□□□ -0.2
Lig3-209ENSMUST00000173009 TirapQ99JY1 241 aa13.83□□□□□ -0.2
Lig3-209ENSMUST00000173009 Gm21370Q3T9V6 190 aa13.82□□□□□ -0.2
Lig3-209ENSMUST00000173009 Krtap10-10A0A1W2P7T6 217 aa13.81□□□□□ -0.2
Lig3-209ENSMUST00000173009 Gm5629P06327 117 aa13.81□□□□□ -0.2
Lig3-209ENSMUST00000173009 Ube2d3P61079 147 aa13.81□□□□□ -0.2
Lig3-209ENSMUST00000173009 Ube2d2P62838 147 aa13.81□□□□□ -0.2
Lig3-209ENSMUST00000173009 Ndufa4Q62425 82 aaKnown RBP13.81□□□□□ -0.2
Lig3-209ENSMUST00000173009 Gm16442D3YZG3 307 aa13.81□□□□□ -0.2
Lig3-209ENSMUST00000173009 Umad1E0CX23 159 aa13.81□□□□□ -0.2
Lig3-209ENSMUST00000173009 Sumo2P61957 95 aaKnown RBP13.81□□□□□ -0.2
Lig3-209ENSMUST00000173009 Phlda3Q9WV95 125 aa13.81□□□□□ -0.2
Lig3-209ENSMUST00000173009 Olfr983Q8VG90 315 aa13.8□□□□□ -0.2
Lig3-209ENSMUST00000173009 Snai3Q9QY31 287 aa13.8□□□□□ -0.2
Lig3-209ENSMUST00000173009 AplnQ9R0R4 77 aa13.8□□□□□ -0.2
Lig3-209ENSMUST00000173009 Ighv8-11A0A075B5X4 119 aa13.79□□□□□ -0.2
Lig3-209ENSMUST00000173009 P01736 120 aa13.79□□□□□ -0.2
Lig3-209ENSMUST00000173009 Polr2kQ63871 58 aa13.79□□□□□ -0.2
Lig3-209ENSMUST00000173009 2010109I03RikQ9CQ11 111 aa13.79□□□□□ -0.2
Lig3-209ENSMUST00000173009 Igkv8-34A0A0G2JDU0 121 aa13.78□□□□□ -0.2
Lig3-209ENSMUST00000173009 Vmo1Q5SXG7 201 aa13.78□□□□□ -0.2
Lig3-209ENSMUST00000173009 Ighv8-13A0A075B5Y0 101 aa13.78□□□□□ -0.2
Lig3-209ENSMUST00000173009 Olfr869E9PX82 323 aa13.78□□□□□ -0.2
Lig3-209ENSMUST00000173009 Gm17430F6RSK3 157 aa13.78□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 55.1 ms