Protein–RNA interactions for Protein: J3QN05

Gm21834, Predicted gene, 21834, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21834J3QN05 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Gm21834J3QN05 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Gm21834J3QN05 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Gm21834J3QN05 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Gm21834J3QN05 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Gm21834J3QN05 Psd-208ENSMUST00000224556 2034 ntBASIC25.26■■□□□ 1.63
Gm21834J3QN05 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Gm21834J3QN05 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Gm21834J3QN05 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Gm21834J3QN05 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Gm21834J3QN05 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Gm21834J3QN05 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Gm21834J3QN05 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Gm21834J3QN05 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Gm21834J3QN05 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Gm21834J3QN05 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
Gm21834J3QN05 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Gm21834J3QN05 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Gm21834J3QN05 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Gm21834J3QN05 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Gm21834J3QN05 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Gm21834J3QN05 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Gm21834J3QN05 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Gm21834J3QN05 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.2■■□□□ 1.3
Gm21834J3QN05 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Gm21834J3QN05 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Gm21834J3QN05 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.92■■□□□ 1.26
Gm21834J3QN05 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Gm21834J3QN05 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Gm21834J3QN05 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Gm21834J3QN05 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.75■■□□□ 1.23
Gm21834J3QN05 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm21834J3QN05 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Gm21834J3QN05 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
Gm21834J3QN05 Gm25239-201ENSMUST00000174915 86 ntBASIC22.62■■□□□ 1.21
Gm21834J3QN05 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Gm21834J3QN05 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Gm21834J3QN05 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.54■■□□□ 1.2
Gm21834J3QN05 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Gm21834J3QN05 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Gm21834J3QN05 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm21834J3QN05 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Gm21834J3QN05 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.3■■□□□ 1.16
Gm21834J3QN05 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm21834J3QN05 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm21834J3QN05 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Gm21834J3QN05 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Gm21834J3QN05 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Gm21834J3QN05 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm21834J3QN05 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Gm21834J3QN05 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Gm21834J3QN05 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm21834J3QN05 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm21834J3QN05 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm21834J3QN05 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm21834J3QN05 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.92■■□□□ 1.1
Gm21834J3QN05 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.9■■□□□ 1.1
Gm21834J3QN05 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.89■■□□□ 1.1
Gm21834J3QN05 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gm21834J3QN05 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.86■■□□□ 1.09
Gm21834J3QN05 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gm21834J3QN05 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Gm21834J3QN05 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm21834J3QN05 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm21834J3QN05 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.81■■□□□ 1.08
Gm21834J3QN05 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm21834J3QN05 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Gm21834J3QN05 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm21834J3QN05 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Gm21834J3QN05 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.63■■□□□ 1.05
Gm21834J3QN05 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm21834J3QN05 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm21834J3QN05 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm21834J3QN05 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm21834J3QN05 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gm21834J3QN05 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.53■■□□□ 1.04
Gm21834J3QN05 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gm21834J3QN05 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Gm21834J3QN05 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gm21834J3QN05 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Gm21834J3QN05 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm21834J3QN05 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm21834J3QN05 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm21834J3QN05 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm21834J3QN05 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm21834J3QN05 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm21834J3QN05 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm21834J3QN05 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Gm21834J3QN05 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Gm21834J3QN05 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm21834J3QN05 Zxda-201ENSMUST00000117281 2621 ntBASIC21.34■■□□□ 1.01
Gm21834J3QN05 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
Gm21834J3QN05 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm21834J3QN05 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm21834J3QN05 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm21834J3QN05 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.29■■□□□ 1
Gm21834J3QN05 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.28■■□□□ 1
Gm21834J3QN05 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.25■□□□□ 0.99
Gm21834J3QN05 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.24■□□□□ 0.99
Gm21834J3QN05 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms