Protein–RNA interactions for Protein: P01736

T-cell receptor beta chain V region PHDS203 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01736 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
P01736 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
P01736 Gm25239-201ENSMUST00000174915 86 ntBASIC24.23■■□□□ 1.47
P01736 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
P01736 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
P01736 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
P01736 Psd-208ENSMUST00000224556 2034 ntBASIC23.9■■□□□ 1.42
P01736 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
P01736 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
P01736 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
P01736 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
P01736 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
P01736 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
P01736 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
P01736 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
P01736 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
P01736 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
P01736 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
P01736 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
P01736 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
P01736 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
P01736 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
P01736 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
P01736 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
P01736 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.97■■□□□ 1.11
P01736 Gm15042-201ENSMUST00000120212 883 ntBASIC21.93■■□□□ 1.1
P01736 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.9■■□□□ 1.1
P01736 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
P01736 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
P01736 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.74■■□□□ 1.07
P01736 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
P01736 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
P01736 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
P01736 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
P01736 Gm15045-201ENSMUST00000117359 883 ntBASIC21.53■■□□□ 1.04
P01736 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.49■■□□□ 1.03
P01736 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
P01736 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
P01736 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
P01736 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
P01736 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.24■□□□□ 0.99
P01736 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
P01736 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
P01736 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
P01736 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.23■□□□□ 0.99
P01736 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
P01736 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
P01736 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
P01736 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
P01736 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.05■□□□□ 0.96
P01736 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
P01736 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
P01736 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
P01736 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
P01736 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
P01736 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
P01736 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
P01736 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
P01736 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
P01736 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.88■□□□□ 0.93
P01736 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
P01736 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
P01736 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
P01736 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
P01736 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.78■□□□□ 0.92
P01736 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
P01736 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.74■□□□□ 0.91
P01736 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
P01736 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
P01736 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
P01736 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
P01736 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
P01736 Gm24109-201ENSMUST00000175489 103 ntBASIC20.62■□□□□ 0.89
P01736 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.62■□□□□ 0.89
P01736 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
P01736 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P01736 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P01736 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P01736 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
P01736 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
P01736 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
P01736 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
P01736 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
P01736 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.41■□□□□ 0.86
P01736 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
P01736 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
P01736 Gm23366-201ENSMUST00000175022 89 ntBASIC20.39■□□□□ 0.85
P01736 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P01736 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P01736 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P01736 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P01736 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
P01736 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
P01736 Zxda-201ENSMUST00000117281 2621 ntBASIC20.27■□□□□ 0.84
P01736 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P01736 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P01736 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
P01736 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
P01736 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
P01736 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms