Protein–RNA interactions for Protein: Q8VCG9

Rfxap, Regulatory factor X-associated protein, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfxapQ8VCG9 Gm25239-201ENSMUST00000174915 86 ntBASIC28.06■■■□□ 2.08
RfxapQ8VCG9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RfxapQ8VCG9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RfxapQ8VCG9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RfxapQ8VCG9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RfxapQ8VCG9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RfxapQ8VCG9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
RfxapQ8VCG9 Psd-208ENSMUST00000224556 2034 ntBASIC24.8■■□□□ 1.56
RfxapQ8VCG9 Gm24109-201ENSMUST00000175489 103 ntBASIC24.61■■□□□ 1.53
RfxapQ8VCG9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RfxapQ8VCG9 Gm15042-201ENSMUST00000120212 883 ntBASIC24.12■■□□□ 1.45
RfxapQ8VCG9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RfxapQ8VCG9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RfxapQ8VCG9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
RfxapQ8VCG9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RfxapQ8VCG9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
RfxapQ8VCG9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.38
RfxapQ8VCG9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
RfxapQ8VCG9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RfxapQ8VCG9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RfxapQ8VCG9 Gm23366-201ENSMUST00000175022 89 ntBASIC23.46■■□□□ 1.35
RfxapQ8VCG9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RfxapQ8VCG9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RfxapQ8VCG9 Gm15045-201ENSMUST00000117359 883 ntBASIC23.36■■□□□ 1.33
RfxapQ8VCG9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RfxapQ8VCG9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RfxapQ8VCG9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RfxapQ8VCG9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RfxapQ8VCG9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RfxapQ8VCG9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RfxapQ8VCG9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RfxapQ8VCG9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RfxapQ8VCG9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.06■■□□□ 1.28
RfxapQ8VCG9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RfxapQ8VCG9 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.97■■□□□ 1.27
RfxapQ8VCG9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.95■■□□□ 1.26
RfxapQ8VCG9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RfxapQ8VCG9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RfxapQ8VCG9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
RfxapQ8VCG9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.73■■□□□ 1.23
RfxapQ8VCG9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RfxapQ8VCG9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RfxapQ8VCG9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RfxapQ8VCG9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.61■■□□□ 1.21
RfxapQ8VCG9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RfxapQ8VCG9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RfxapQ8VCG9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
RfxapQ8VCG9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.45■■□□□ 1.19
RfxapQ8VCG9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.45■■□□□ 1.18
RfxapQ8VCG9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
RfxapQ8VCG9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RfxapQ8VCG9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RfxapQ8VCG9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RfxapQ8VCG9 Gm25238-201ENSMUST00000174914 89 ntBASIC22.23■■□□□ 1.15
RfxapQ8VCG9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
RfxapQ8VCG9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.2■■□□□ 1.14
RfxapQ8VCG9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RfxapQ8VCG9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
RfxapQ8VCG9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RfxapQ8VCG9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RfxapQ8VCG9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
RfxapQ8VCG9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RfxapQ8VCG9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RfxapQ8VCG9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RfxapQ8VCG9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RfxapQ8VCG9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RfxapQ8VCG9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RfxapQ8VCG9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RfxapQ8VCG9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RfxapQ8VCG9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RfxapQ8VCG9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RfxapQ8VCG9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
RfxapQ8VCG9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.85■■□□□ 1.09
RfxapQ8VCG9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.85■■□□□ 1.09
RfxapQ8VCG9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RfxapQ8VCG9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RfxapQ8VCG9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.69■■□□□ 1.06
RfxapQ8VCG9 Gm25262-201ENSMUST00000174934 133 ntBASIC21.69■■□□□ 1.06
RfxapQ8VCG9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RfxapQ8VCG9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RfxapQ8VCG9 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.65■■□□□ 1.06
RfxapQ8VCG9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RfxapQ8VCG9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RfxapQ8VCG9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.62■■□□□ 1.05
RfxapQ8VCG9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RfxapQ8VCG9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RfxapQ8VCG9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RfxapQ8VCG9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.56■■□□□ 1.04
RfxapQ8VCG9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RfxapQ8VCG9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.53■■□□□ 1.04
RfxapQ8VCG9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RfxapQ8VCG9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.48■■□□□ 1.03
RfxapQ8VCG9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
RfxapQ8VCG9 Zxda-201ENSMUST00000117281 2621 ntBASIC21.47■■□□□ 1.03
RfxapQ8VCG9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RfxapQ8VCG9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RfxapQ8VCG9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RfxapQ8VCG9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RfxapQ8VCG9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RfxapQ8VCG9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms