Protein–RNA interactions for Protein: Q8C559

Gm9944, MCG148018, mousemouse

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9944Q8C559 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Gm9944Q8C559 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Gm9944Q8C559 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Gm9944Q8C559 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Gm9944Q8C559 Psd-208ENSMUST00000224556 2034 ntBASIC24.54■■□□□ 1.52
Gm9944Q8C559 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Gm9944Q8C559 Gm25239-201ENSMUST00000174915 86 ntBASIC24.28■■□□□ 1.48
Gm9944Q8C559 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Gm9944Q8C559 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Gm9944Q8C559 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Gm9944Q8C559 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Gm9944Q8C559 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Gm9944Q8C559 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Gm9944Q8C559 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Gm9944Q8C559 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Gm9944Q8C559 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23■■□□□ 1.27
Gm9944Q8C559 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Gm9944Q8C559 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Gm9944Q8C559 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm9944Q8C559 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.45■■□□□ 1.19
Gm9944Q8C559 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Gm9944Q8C559 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Gm9944Q8C559 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Gm9944Q8C559 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm9944Q8C559 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Gm9944Q8C559 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gm9944Q8C559 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gm9944Q8C559 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.24■■□□□ 1.15
Gm9944Q8C559 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.2■■□□□ 1.14
Gm9944Q8C559 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.2■■□□□ 1.14
Gm9944Q8C559 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Gm9944Q8C559 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Gm9944Q8C559 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Gm9944Q8C559 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm9944Q8C559 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gm9944Q8C559 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm9944Q8C559 Gm15042-201ENSMUST00000120212 883 ntBASIC21.8■■□□□ 1.08
Gm9944Q8C559 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm9944Q8C559 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.79■■□□□ 1.08
Gm9944Q8C559 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm9944Q8C559 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Gm9944Q8C559 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Gm9944Q8C559 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm9944Q8C559 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm9944Q8C559 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.69■■□□□ 1.06
Gm9944Q8C559 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.64■■□□□ 1.05
Gm9944Q8C559 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Gm9944Q8C559 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm9944Q8C559 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm9944Q8C559 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm9944Q8C559 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Gm9944Q8C559 Gm15045-201ENSMUST00000117359 883 ntBASIC21.44■■□□□ 1.02
Gm9944Q8C559 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Gm9944Q8C559 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm9944Q8C559 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm9944Q8C559 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Gm9944Q8C559 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Gm9944Q8C559 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.29■■□□□ 1
Gm9944Q8C559 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm9944Q8C559 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm9944Q8C559 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm9944Q8C559 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm9944Q8C559 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm9944Q8C559 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm9944Q8C559 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm9944Q8C559 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm9944Q8C559 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm9944Q8C559 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm9944Q8C559 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm9944Q8C559 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Gm9944Q8C559 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gm9944Q8C559 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.01■□□□□ 0.95
Gm9944Q8C559 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm9944Q8C559 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm9944Q8C559 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Gm9944Q8C559 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm9944Q8C559 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.94■□□□□ 0.94
Gm9944Q8C559 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm9944Q8C559 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.92■□□□□ 0.94
Gm9944Q8C559 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm9944Q8C559 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.87■□□□□ 0.93
Gm9944Q8C559 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm9944Q8C559 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm9944Q8C559 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm9944Q8C559 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm9944Q8C559 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm9944Q8C559 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gm9944Q8C559 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm9944Q8C559 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm9944Q8C559 Gm24109-201ENSMUST00000175489 103 ntBASIC20.71■□□□□ 0.91
Gm9944Q8C559 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm9944Q8C559 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm9944Q8C559 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Gm9944Q8C559 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm9944Q8C559 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm9944Q8C559 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Gm9944Q8C559 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm9944Q8C559 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm9944Q8C559 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm9944Q8C559 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms