RNA–Protein interactions for RNA: ENSMUST00000108419.8

Vps53-203, Transcript of Vacuolar protein sorting-associated protein 53 homolog, mousemouse

TSL 1 (best) BASIC

Gene Vps53, Length 2,209 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53-203ENSMUST00000108419 Spink2Q8BMY7 86 aa12.93□□□□□ -0.34
Vps53-203ENSMUST00000108419 Ighv1-80A0A075B5Y3 117 aa12.92□□□□□ -0.34
Vps53-203ENSMUST00000108419 Trav19A0A0B4J1K4 119 aa12.92□□□□□ -0.34
Vps53-203ENSMUST00000108419 Gm8439G3UWA7 96 aa12.92□□□□□ -0.34
Vps53-203ENSMUST00000108419 SbsponQ3UPR9 264 aa12.92□□□□□ -0.34
Vps53-203ENSMUST00000108419 Spata45Q9CVW4 97 aa12.92□□□□□ -0.34
Vps53-203ENSMUST00000108419 TcraP01849 138 aa12.91□□□□□ -0.34
Vps53-203ENSMUST00000108419 Defa24Q5G865 93 aa12.91□□□□□ -0.34
Vps53-203ENSMUST00000108419 Cd99Q8VCN6 175 aa12.91□□□□□ -0.34
Vps53-203ENSMUST00000108419 3110018I06RikQ9CXS0 120 aa12.91□□□□□ -0.34
Vps53-203ENSMUST00000108419 Dpm3Q9D1Q4 92 aa12.91□□□□□ -0.34
Vps53-203ENSMUST00000108419 Rbmxl2Q9DAE2 385 aaKnown RBP12.91□□□□□ -0.34
Vps53-203ENSMUST00000108419 Ighv1-53A0A075B5W3 117 aa12.9□□□□□ -0.34
Vps53-203ENSMUST00000108419 Fxyd7P59648 80 aa12.9□□□□□ -0.34
Vps53-203ENSMUST00000108419 AamdcQ8R0P4 122 aa12.9□□□□□ -0.34
Vps53-203ENSMUST00000108419 8030423J24RikQ9CX45 142 aa12.9□□□□□ -0.34
Vps53-203ENSMUST00000108419 Rpl11Q9CXW4 178 aaKnown RBP12.9□□□□□ -0.34
Vps53-203ENSMUST00000108419 Ccl25O35903 144 aa12.9□□□□□ -0.34
Vps53-203ENSMUST00000108419 Vamp8O70404 101 aa12.9□□□□□ -0.34
Vps53-203ENSMUST00000108419 Gm94Q3V2D2 93 aa12.9□□□□□ -0.34
Vps53-203ENSMUST00000108419 Trav8-1A0A075B641 109 aa12.89□□□□□ -0.35
Vps53-203ENSMUST00000108419 Gm5878E9PUB3 99 aa12.89□□□□□ -0.35
Vps53-203ENSMUST00000108419 Rnase1P00683 149 aa12.89□□□□□ -0.35
Vps53-203ENSMUST00000108419 Ins1P01325 108 aa12.89□□□□□ -0.35
Vps53-203ENSMUST00000108419 Tnfrsf23Q9ER63 176 aa12.89□□□□□ -0.35
Vps53-203ENSMUST00000108419 Ighv8-12A0A0G2JDE1 119 aa12.89□□□□□ -0.35
Vps53-203ENSMUST00000108419 Gm9767G3X930 207 aa12.89□□□□□ -0.35
Vps53-203ENSMUST00000108419 Prss29Q99MS4 279 aa12.89□□□□□ -0.35
Vps53-203ENSMUST00000108419 Gm3233E9Q2H5 230 aa12.88□□□□□ -0.35
Vps53-203ENSMUST00000108419 Tcrg-C1A0A075B5Z0 172 aa12.88□□□□□ -0.35
Vps53-203ENSMUST00000108419 Ighv1-52A0A0A6YXC3 117 aa12.88□□□□□ -0.35
Vps53-203ENSMUST00000108419 Insl3O09107 122 aa12.88□□□□□ -0.35
Vps53-203ENSMUST00000108419 Gm12888Q3UW77 119 aa12.88□□□□□ -0.35
Vps53-203ENSMUST00000108419 Defb45Q3V490 66 aa12.88□□□□□ -0.35
Vps53-203ENSMUST00000108419 Itpr2Q9Z329 2701 aa12.88□□□□□ -0.35
Vps53-203ENSMUST00000108419 NipblQ6KCD5 2798 aaKnown RBP12.87□□□□□ -0.35
Vps53-203ENSMUST00000108419 Ighv12-3A0A075B5T1 117 aa12.87□□□□□ -0.35
Vps53-203ENSMUST00000108419 Q4KKZ1 196 aa12.87□□□□□ -0.35
Vps53-203ENSMUST00000108419 Psmb11Q8BG41 302 aa12.87□□□□□ -0.35
Vps53-203ENSMUST00000108419 RhohQ9D3G9 191 aa12.87□□□□□ -0.35
Vps53-203ENSMUST00000108419 Ucn2Q99ML8 113 aa12.86□□□□□ -0.35
Vps53-203ENSMUST00000108419 AtrQ9JKK8 2635 aa12.86□□□□□ -0.35
Vps53-203ENSMUST00000108419 Hspg2Q05793 3707 aaKnown RBP12.86□□□□□ -0.35
Vps53-203ENSMUST00000108419 Igkv4-81A0A0G2JEY5 119 aa12.85□□□□□ -0.35
Vps53-203ENSMUST00000108419 A730046J19RikA0A1B0GSN8 89 aa12.85□□□□□ -0.35
Vps53-203ENSMUST00000108419 Umad1E0CX23 159 aa12.85□□□□□ -0.35
Vps53-203ENSMUST00000108419 P18527 97 aa12.85□□□□□ -0.35
Vps53-203ENSMUST00000108419 Wfdc15aQ8BH89 80 aa12.85□□□□□ -0.35
Vps53-203ENSMUST00000108419 Mustn1Q99JI1 82 aa12.85□□□□□ -0.35
Vps53-203ENSMUST00000108419 Rnf183Q8QZS5 190 aa12.85□□□□□ -0.35
Vps53-203ENSMUST00000108419 Clec5aQ9R007 190 aa12.85□□□□□ -0.35
Vps53-203ENSMUST00000108419 Igfn1Q3KNY0 2849 aa12.85□□□□□ -0.35
Vps53-203ENSMUST00000108419 A930009A15RikG3UYI6 118 aa12.84□□□□□ -0.35
Vps53-203ENSMUST00000108419 P01837 106 aa12.84□□□□□ -0.35
Vps53-203ENSMUST00000108419 Cdx4Q07424 282 aa12.84□□□□□ -0.35
Vps53-203ENSMUST00000108419 Zfp248Q640N4 576 aa12.84□□□□□ -0.35
Vps53-203ENSMUST00000108419 Cryba4Q9JJV0 196 aa12.84□□□□□ -0.35
Vps53-203ENSMUST00000108419 Ang5Q5GAN1 145 aa12.84□□□□□ -0.35
Vps53-203ENSMUST00000108419 AY761184Q9D848 116 aa12.84□□□□□ -0.35
Vps53-203ENSMUST00000108419 Ighv14-1A0A075B5R4 117 aa12.83□□□□□ -0.36
Vps53-203ENSMUST00000108419 Gm12845A0A0N4SUM5 588 aa12.83□□□□□ -0.36
Vps53-203ENSMUST00000108419 Gm10295Q8CCF3 114 aa12.83□□□□□ -0.36
Vps53-203ENSMUST00000108419 Olfr312Q7TRZ9 308 aa12.82□□□□□ -0.36
Vps53-203ENSMUST00000108419 Avpi1Q9D7H4 142 aa12.82□□□□□ -0.36
Vps53-203ENSMUST00000108419 Gm44965A0A0N4SVR3 59 aa12.82□□□□□ -0.36
Vps53-203ENSMUST00000108419 Brd3osA0A1B0GRB6 84 aa12.82□□□□□ -0.36
Vps53-203ENSMUST00000108419 Gm45717A0A1B0GT68 152 aa12.82□□□□□ -0.36
Vps53-203ENSMUST00000108419 Odf1Q61999 247 aa12.82□□□□□ -0.36
Vps53-203ENSMUST00000108419 Ndufa4Q62425 82 aaKnown RBP12.82□□□□□ -0.36
Vps53-203ENSMUST00000108419 Atp6v0e2Q91XE7 81 aa12.82□□□□□ -0.36
Vps53-203ENSMUST00000108419 Gm28269A0A087WSG3 125 aa12.81□□□□□ -0.36
Vps53-203ENSMUST00000108419 Igkv20-101-2A0A0G2JDU3 113 aa12.81□□□□□ -0.36
Vps53-203ENSMUST00000108419 Cks1brtQ3UNC9 96 aa12.81□□□□□ -0.36
Vps53-203ENSMUST00000108419 Khdc1cQ4KL78 166 aa12.81□□□□□ -0.36
Vps53-203ENSMUST00000108419 Trav7-2Q5R1I3 112 aa12.81□□□□□ -0.36
Vps53-203ENSMUST00000108419 Gm16223Q8CBM3 117 aa12.81□□□□□ -0.36
Vps53-203ENSMUST00000108419 Ovol2Q8CIV7 274 aa12.81□□□□□ -0.36
Vps53-203ENSMUST00000108419 Ormdl2Q9CQZ0 153 aa12.81□□□□□ -0.36
Vps53-203ENSMUST00000108419 Pgpep1Q9ESW8 209 aa12.81□□□□□ -0.36
Vps53-203ENSMUST00000108419 Cks1bP61025 79 aa12.81□□□□□ -0.36
Vps53-203ENSMUST00000108419 Tmem14cQ9CQN6 114 aa12.81□□□□□ -0.36
Vps53-203ENSMUST00000108419 Igkv4-69A0A0B4J1I6 116 aa12.8□□□□□ -0.36
Vps53-203ENSMUST00000108419 CdsnQ7TPC1 561 aa12.8□□□□□ -0.36
Vps53-203ENSMUST00000108419 TshbP12656 138 aa12.8□□□□□ -0.36
Vps53-203ENSMUST00000108419 Defa3P28310 93 aa12.8□□□□□ -0.36
Vps53-203ENSMUST00000108419 Defa10P50708 93 aa12.8□□□□□ -0.36
Vps53-203ENSMUST00000108419 Defa15P50713 93 aa12.8□□□□□ -0.36
Vps53-203ENSMUST00000108419 Ube2d1P61080 147 aaKnown RBP12.8□□□□□ -0.36
Vps53-203ENSMUST00000108419 Fhl1P97447 280 aaKnown RBP12.8□□□□□ -0.36
Vps53-203ENSMUST00000108419 Krtap26-1Q9D7N2 215 aa12.8□□□□□ -0.36
Vps53-203ENSMUST00000108419 Dynlrb2Q9DAJ5 96 aa12.8□□□□□ -0.36
Vps53-203ENSMUST00000108419 Cdip1Q9DB75 208 aa12.8□□□□□ -0.36
Vps53-203ENSMUST00000108419 Ighv1-62-3P01754 117 aa12.79□□□□□ -0.36
Vps53-203ENSMUST00000108419 Sumo2P61957 95 aaKnown RBP12.79□□□□□ -0.36
Vps53-203ENSMUST00000108419 Pradc1Q9D9N8 188 aa12.79□□□□□ -0.36
Vps53-203ENSMUST00000108419 Plac1Q9JI83 173 aa12.79□□□□□ -0.36
Vps53-203ENSMUST00000108419 Ighv8-5A0A0A6YY60 119 aa12.78□□□□□ -0.36
Vps53-203ENSMUST00000108419 Ighv1-82A0A0G2JEU7 117 aa12.78□□□□□ -0.36
Vps53-203ENSMUST00000108419 Ss18Q62280 418 aa12.78□□□□□ -0.36
Vps53-203ENSMUST00000108419 Trbv17A0A140T8P8 114 aa12.78□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 46.2 ms