RNA–Protein interactions for RNA: ENSMUST00000108419.8

Vps53-203, Transcript of Vacuolar protein sorting-associated protein 53 homolog, mousemouse

TSL 1 (best) BASIC

Gene Vps53, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53-203ENSMUST00000108419 NischQ80TM9 1593 aa35.61■■■■□ 3.29
Vps53-203ENSMUST00000108419 Gm35339A0A140LHH9 1649 aa35.47■■■■□ 3.27
Vps53-203ENSMUST00000108419 Abcc9P70170 1546 aa34.5■■■■□ 3.11
Vps53-203ENSMUST00000108419 Abcc8B2RUS7 1588 aa34.1■■■■□ 3.05
Vps53-203ENSMUST00000108419 ScribQ80U72 1612 aa32.3■■■□□ 2.76
Vps53-203ENSMUST00000108419 Rhox8Q6VSS7 320 aa31.97■■■□□ 2.71
Vps53-203ENSMUST00000108419 Dcaf1Q80TR8 1506 aa31.57■■■□□ 2.64
Vps53-203ENSMUST00000108419 Kdm5dQ62240 1548 aa31.47■■■□□ 2.63
Vps53-203ENSMUST00000108419 NacadQ5SWP3 1504 aa31.34■■■□□ 2.61
Vps53-203ENSMUST00000108419 Rb1cc1Q9ESK9 1588 aa31.11■■■□□ 2.57
Vps53-203ENSMUST00000108419 Baz1aO88379 1555 aa30.71■■■□□ 2.51
Vps53-203ENSMUST00000108419 Sycp2Q9CUU3 1500 aa30.71■■■□□ 2.51
Vps53-203ENSMUST00000108419 Ccdc180J3QNE4 1664 aa30.69■■■□□ 2.5
Vps53-203ENSMUST00000108419 Rtl1Q7M732 1744 aa30.48■■■□□ 2.47
Vps53-203ENSMUST00000108419 Crybg2B7ZCC2 1516 aa30.36■■■□□ 2.45
Vps53-203ENSMUST00000108419 Zcchc6Q5BLK4 1491 aaKnown RBP30.19■■■□□ 2.42
Vps53-203ENSMUST00000108419 BicraF8VPZ9 1578 aa30.18■■■□□ 2.42
Vps53-203ENSMUST00000108419 Smarca2Q6DIC0 1577 aa29.93■■■□□ 2.38
Vps53-203ENSMUST00000108419 Ccdc136Q3TVA9 1136 aa29.83■■■□□ 2.37
Vps53-203ENSMUST00000108419 Cecr2E9Q2Z1 1453 aa29.54■■■□□ 2.32
Vps53-203ENSMUST00000108419 Trim41Q5NCC3 630 aa29.22■■■□□ 2.27
Vps53-203ENSMUST00000108419 Smarca4Q3TKT4 1613 aaKnown RBP29.15■■■□□ 2.26
Vps53-203ENSMUST00000108419 Brd4Q9ESU6 1400 aaKnown RBP29.15■■■□□ 2.26
Vps53-203ENSMUST00000108419 Synj1Q8CHC4 1574 aa29.05■■■□□ 2.24
Vps53-203ENSMUST00000108419 Pds5bQ4VA53 1446 aaKnown RBP29.01■■■□□ 2.23
Vps53-203ENSMUST00000108419 CftrP26361 1476 aa28.98■■■□□ 2.23
Vps53-203ENSMUST00000108419 Atad2bE9Q166 1460 aaKnown RBP28.97■■■□□ 2.23
Vps53-203ENSMUST00000108419 Iqgap2Q3UQ44 1575 aa28.87■■■□□ 2.21
Vps53-203ENSMUST00000108419 Cttnbp2B9EJA2 1648 aa28.84■■■□□ 2.21
Vps53-203ENSMUST00000108419 Rpgrip1Q9EPQ2 1331 aa28.66■■■□□ 2.18
Vps53-203ENSMUST00000108419 Esf1Q3V1V3 845 aaKnown RBP28.66■■■□□ 2.18
Vps53-203ENSMUST00000108419 Cngb1E1AZ71 1325 aa28.56■■■□□ 2.16
Vps53-203ENSMUST00000108419 HrcG5E8J6 738 aa28.56■■■□□ 2.16
Vps53-203ENSMUST00000108419 Golga3P55937 1487 aa28.53■■■□□ 2.16
Vps53-203ENSMUST00000108419 Frmpd1A2AKB4 1549 aa28.46■■■□□ 2.15
Vps53-203ENSMUST00000108419 Wdr62Q3U3T8 1523 aa28.44■■■□□ 2.14
Vps53-203ENSMUST00000108419 Ercc6F8VPZ5 1481 aa28.42■■■□□ 2.14
Vps53-203ENSMUST00000108419 Thoc2B1AZI6 1594 aaKnown RBP28.38■■■□□ 2.13
Vps53-203ENSMUST00000108419 Top2bQ64511 1612 aa28.35■■■□□ 2.13
Vps53-203ENSMUST00000108419 Rsf1E9PWW9 1441 aaKnown RBP28.2■■■□□ 2.1
Vps53-203ENSMUST00000108419 Chic1Q8CBW7 227 aa28.18■■■□□ 2.1
Vps53-203ENSMUST00000108419 Ccdc88bQ4QRL3 1481 aa28.16■■■□□ 2.1
Vps53-203ENSMUST00000108419 Unc13aQ4KUS2 1712 aa28.13■■■□□ 2.09
Vps53-203ENSMUST00000108419 Cc2d2aQ8CFW7 1633 aa28.12■■■□□ 2.09
Vps53-203ENSMUST00000108419 Cep164Q5DU05 1446 aa28.04■■■□□ 2.08
Vps53-203ENSMUST00000108419 Dnajc5bQ9CQ94 199 aa28.03■■■□□ 2.08
Vps53-203ENSMUST00000108419 Phldb1Q6PDH0 1371 aaKnown RBP28.02■■■□□ 2.08
Vps53-203ENSMUST00000108419 Fmn1Q05860 1466 aa27.95■■■□□ 2.07
Vps53-203ENSMUST00000108419 Fam135aQ6NS59 1506 aa27.92■■■□□ 2.06
Vps53-203ENSMUST00000108419 Acin1Q9JIX8 1338 aaKnown RBP27.89■■■□□ 2.06
Vps53-203ENSMUST00000108419 Ubl4bQ9CQ84 188 aa27.84■■■□□ 2.05
Vps53-203ENSMUST00000108419 Lamc3Q9R0B6 1581 aa27.83■■■□□ 2.05
Vps53-203ENSMUST00000108419 Kif15Q6P9L6 1387 aa27.82■■■□□ 2.04
Vps53-203ENSMUST00000108419 TnnQ80Z71 1560 aa27.81■■■□□ 2.04
Vps53-203ENSMUST00000108419 Gab3Q8BSM5 595 aa27.71■■■□□ 2.03
Vps53-203ENSMUST00000108419 Top2aQ01320 1528 aaKnown RBP27.66■■■□□ 2.02
Vps53-203ENSMUST00000108419 Cux2P70298 1426 aa27.56■■■□□ 2
Vps53-203ENSMUST00000108419 Il27Q8K3I6 234 aa27.55■■■□□ 2
Vps53-203ENSMUST00000108419 Camsap1A2AHC3 1581 aa27.48■■□□□ 1.99
Vps53-203ENSMUST00000108419 Ccdc18Q640L5 1455 aa27.43■■□□□ 1.98
Vps53-203ENSMUST00000108419 Baz1bQ9Z277 1479 aa27.41■■□□□ 1.98
Vps53-203ENSMUST00000108419 Npm1Q61937 292 aaKnown RBP27.38■■□□□ 1.97
Vps53-203ENSMUST00000108419 Mrc2Q64449 1479 aa27.33■■□□□ 1.97
Vps53-203ENSMUST00000108419 Rapgef2Q8CHG7 1496 aa27.29■■□□□ 1.96
Vps53-203ENSMUST00000108419 Grin2bQ01097 1482 aa27.23■■□□□ 1.95
Vps53-203ENSMUST00000108419 PtprkP35822 1457 aa27.22■■□□□ 1.95
Vps53-203ENSMUST00000108419 LrpprcQ6PB66 1392 aaKnown RBP27.18■■□□□ 1.94
Vps53-203ENSMUST00000108419 Npm2Q80W85 207 aa27.18■■□□□ 1.94
Vps53-203ENSMUST00000108419 NrkQ9R0G8 1455 aa27.15■■□□□ 1.94
Vps53-203ENSMUST00000108419 Ehmt2Q9Z148 1263 aaKnown RBP27.15■■□□□ 1.94
Vps53-203ENSMUST00000108419 Cep162Q6ZQ06 1403 aa27.11■■□□□ 1.93
Vps53-203ENSMUST00000108419 Kif21aQ9QXL2 1672 aa27.1■■□□□ 1.93
Vps53-203ENSMUST00000108419 Shroom4Q1W617 1475 aa27.09■■□□□ 1.93
Vps53-203ENSMUST00000108419 Pcgf6Q99NA9 353 aa27.08■■□□□ 1.93
Vps53-203ENSMUST00000108419 PogzQ8BZH4 1409 aaKnown RBP27.08■■□□□ 1.93
Vps53-203ENSMUST00000108419 Dhx29Q6PGC1 1365 aaKnown RBP27.06■■□□□ 1.92
Vps53-203ENSMUST00000108419 Duox2A2AQ99 1517 aa27.02■■□□□ 1.92
Vps53-203ENSMUST00000108419 Eif4g1Q6NZJ6 1600 aaKnown RBP26.99■■□□□ 1.91
Vps53-203ENSMUST00000108419 Myt1lP97500 1187 aa26.98■■□□□ 1.91
Vps53-203ENSMUST00000108419 Efcab5A0JP43 1406 aa26.97■■□□□ 1.91
Vps53-203ENSMUST00000108419 Arhgap35Q91YM2 1499 aa26.94■■□□□ 1.9
Vps53-203ENSMUST00000108419 Crocc2F6XLV1 1638 aa26.88■■□□□ 1.89
Vps53-203ENSMUST00000108419 Zeb1Q64318 1117 aa26.85■■□□□ 1.89
Vps53-203ENSMUST00000108419 Samd9lQ69Z37 1561 aa26.82■■□□□ 1.88
Vps53-203ENSMUST00000108419 Mroh2bQ7M6Y6 1581 aa26.82■■□□□ 1.88
Vps53-203ENSMUST00000108419 Plb1Q3TTY0 1478 aa26.78■■□□□ 1.88
Vps53-203ENSMUST00000108419 Map3k1P53349 1493 aa26.74■■□□□ 1.87
Vps53-203ENSMUST00000108419 Urb2E9Q7L1 1524 aaKnown RBP26.72■■□□□ 1.87
Vps53-203ENSMUST00000108419 Lrriq1Q0P5X1 1673 aa26.7■■□□□ 1.87
Vps53-203ENSMUST00000108419 Rad54l2Q99NG0 1466 aa26.69■■□□□ 1.86
Vps53-203ENSMUST00000108419 Clip1Q922J3 1391 aa26.65■■□□□ 1.86
Vps53-203ENSMUST00000108419 SynmQ70IV5 1561 aa26.64■■□□□ 1.85
Vps53-203ENSMUST00000108419 AqrQ8CFQ3 1481 aaKnown RBP26.56■■□□□ 1.84
Vps53-203ENSMUST00000108419 Disp1Q3TDN0 1521 aa26.56■■□□□ 1.84
Vps53-203ENSMUST00000108419 Carmil1Q6EDY6 1374 aa26.54■■□□□ 1.84
Vps53-203ENSMUST00000108419 Magi3Q9EQJ9 1476 aa26.5■■□□□ 1.83
Vps53-203ENSMUST00000108419 Ift140E9PY46 1464 aa26.49■■□□□ 1.83
Vps53-203ENSMUST00000108419 Setd1bQ8CFT2 1985 aa26.46■■□□□ 1.83
Vps53-203ENSMUST00000108419 Grin2aP35436 1464 aa26.46■■□□□ 1.83
Vps53-203ENSMUST00000108419 Pla2r1Q62028 1487 aa26.46■■□□□ 1.83
Retrieved 100 of 22,080 RNA–protein pairs in 45.8 ms