RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C IFA38P38286 347 aa3.5□□□□□ -1.85
RPC40YPR110C BUD16P39988 312 aa3.5□□□□□ -1.85
RPC40YPR110C VID27P40157 782 aa3.5□□□□□ -1.85
RPC40YPR110C VPS73P53142 486 aaKnown RBP3.5□□□□□ -1.85
RPC40YPR110C CSL4P53859 292 aaPredicted RBP3.5□□□□□ -1.85
RPC40YPR110C VPS72Q03388 795 aa3.5□□□□□ -1.85
RPC40YPR110C CSR1Q06705 408 aaKnown RBP3.5□□□□□ -1.85
RPC40YPR110C VAM6Q07468 1049 aa3.5□□□□□ -1.85
RPC40YPR110C CRT10Q08226 957 aa3.5□□□□□ -1.85
RPC40YPR110C NEW1Q08972 1196 aaKnown RBP3.5□□□□□ -1.85
RPC40YPR110C LEU2P04173 364 aaPredicted RBP3.49□□□□□ -1.85
RPC40YPR110C CHO2P05374 869 aaKnown RBP3.49□□□□□ -1.85
RPC40YPR110C TPK2P06245 380 aa3.49□□□□□ -1.85
RPC40YPR110C PET122P10355 254 aa3.49□□□□□ -1.85
RPC40YPR110C YPK1P12688 680 aaKnown RBP3.49□□□□□ -1.85
RPC40YPR110C RER1P25560 188 aa3.49□□□□□ -1.85
RPC40YPR110C EMP70P32802 667 aa3.49□□□□□ -1.85
RPC40YPR110C GEX2P36173 615 aa3.49□□□□□ -1.85
RPC40YPR110C MUP3P38734 546 aa3.49□□□□□ -1.85
RPC40YPR110C VPS8P39702 1274 aa3.49□□□□□ -1.85
RPC40YPR110C MAM1P40065 302 aa3.49□□□□□ -1.85
RPC40YPR110C KAP123P40069 1113 aaKnown RBP3.49□□□□□ -1.85
RPC40YPR110C LAS21P40367 830 aa3.49□□□□□ -1.85
RPC40YPR110C RRT6P53117 311 aaPredicted RBP3.49□□□□□ -1.85
RPC40YPR110C GFD1Q04839 188 aaKnown RBP3.49□□□□□ -1.85
RPC40YPR110C CRF1Q04930 467 aa3.49□□□□□ -1.85
RPC40YPR110C VID22Q05934 901 aa3.49□□□□□ -1.85
RPC40YPR110C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
RPC40YPR110C TRM8Q12009 286 aa3.49□□□□□ -1.85
RPC40YPR110C MDM20Q12387 796 aaKnown RBP3.49□□□□□ -1.85
RPC40YPR110C RPN13O13563 156 aa3.48□□□□□ -1.85
RPC40YPR110C PMA2P19657 947 aa3.48□□□□□ -1.85
RPC40YPR110C PDE1P22434 369 aa3.48□□□□□ -1.85
RPC40YPR110C URK1P27515 501 aa3.48□□□□□ -1.85
RPC40YPR110C SWC3P31376 625 aa3.48□□□□□ -1.85
RPC40YPR110C RPT3P33298 428 aaKnown RBP3.48□□□□□ -1.85
RPC40YPR110C ARO9P38840 513 aaPredicted RBP3.48□□□□□ -1.85
RPC40YPR110C YEL020CP39994 560 aa3.48□□□□□ -1.85
RPC40YPR110C QRI1P43123 477 aaKnown RBP3.48□□□□□ -1.85
RPC40YPR110C ASN1P49089 572 aaKnown RBP3.48□□□□□ -1.85
RPC40YPR110C PSP1P50896 841 aaKnown RBP3.48□□□□□ -1.85
RPC40YPR110C MTG1Q03151 367 aaPredicted RBP3.48□□□□□ -1.85
RPC40YPR110C TMA64Q04600 565 aaKnown RBP3.48□□□□□ -1.85
RPC40YPR110C ARG7Q04728 441 aa3.48□□□□□ -1.85
RPC40YPR110C GTB1Q04924 702 aa3.48□□□□□ -1.85
RPC40YPR110C RPL7AP05737 244 aaKnown RBP3.47□□□□□ -1.85
RPC40YPR110C RNR3P21672 869 aaKnown RBP3.47□□□□□ -1.85
RPC40YPR110C AMD2P22580 549 aa3.47□□□□□ -1.85
RPC40YPR110C MCM10P32354 571 aa3.47□□□□□ -1.85
RPC40YPR110C CBF2P32504 956 aa3.47□□□□□ -1.85
RPC40YPR110C SLC1P33333 303 aa3.47□□□□□ -1.85
RPC40YPR110C AXL2P38928 823 aa3.47□□□□□ -1.85
RPC40YPR110C MRK1P50873 501 aa3.47□□□□□ -1.85
RPC40YPR110C TAM41P53230 385 aa3.47□□□□□ -1.85
RPC40YPR110C MEP3P53390 489 aa3.47□□□□□ -1.85
RPC40YPR110C GIS1Q03833 894 aa3.47□□□□□ -1.85
RPC40YPR110C MRI1Q06489 411 aaKnown RBP3.47□□□□□ -1.85
RPC40YPR110C ATG23Q06671 453 aa3.47□□□□□ -1.85
RPC40YPR110C RPL7BQ12213 244 aaKnown RBP3.47□□□□□ -1.85
RPC40YPR110C LCB4Q12246 624 aa3.47□□□□□ -1.85
RPC40YPR110C YER175W-AQ8TGU4 54 aa3.47□□□□□ -1.85
RPC40YPR110C Q0010Q9ZZX9 128 aa3.47□□□□□ -1.85
RPC40YPR110C YMR084WA2P2R3 262 aa3.46□□□□□ -1.86
RPC40YPR110C PFK2P16862 959 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
RPC40YPR110C GCD7P32502 381 aaPredicted RBP3.46□□□□□ -1.86
RPC40YPR110C UGP1P32861 499 aaKnown RBP3.46□□□□□ -1.86
RPC40YPR110C NUP120P35729 1037 aa3.46□□□□□ -1.86
RPC40YPR110C TDP1P38319 544 aa3.46□□□□□ -1.86
RPC40YPR110C LNP1P38878 278 aa3.46□□□□□ -1.86
RPC40YPR110C UME6P39001 836 aa3.46□□□□□ -1.86
RPC40YPR110C YER010CP40011 234 aa3.46□□□□□ -1.86
RPC40YPR110C YIL166CP40445 542 aa3.46□□□□□ -1.86
RPC40YPR110C OPT1P40897 799 aa3.46□□□□□ -1.86
RPC40YPR110C SKP2P42843 763 aa3.46□□□□□ -1.86
RPC40YPR110C STU2P46675 888 aa3.46□□□□□ -1.86
RPC40YPR110C IMO32P53219 342 aa3.46□□□□□ -1.86
RPC40YPR110C APM1Q00776 475 aaPredicted RBP3.46□□□□□ -1.86
RPC40YPR110C YDL242WQ07746 117 aa3.46□□□□□ -1.86
RPC40YPR110C SUT2Q12286 268 aa3.46□□□□□ -1.86
RPC40YPR110C COX17Q12287 69 aa3.46□□□□□ -1.86
RPC40YPR110C RVB2Q12464 471 aaKnown RBP3.46□□□□□ -1.86
RPC40YPR110C PCD1Q12524 340 aa3.46□□□□□ -1.86
RPC40YPR110C YOL087CQ99247 1116 aa3.46□□□□□ -1.86
RPC40YPR110C TPK1P06244 397 aa3.45□□□□□ -1.86
RPC40YPR110C YML003WP0CF16 290 aa3.45□□□□□ -1.86
RPC40YPR110C STE12P13574 688 aa3.45□□□□□ -1.86
RPC40YPR110C GUK1P15454 187 aaKnown RBP3.45□□□□□ -1.86
RPC40YPR110C SPO16P17122 198 aa3.45□□□□□ -1.86
RPC40YPR110C SAT4P25333 603 aaKnown RBP3.45□□□□□ -1.86
RPC40YPR110C RAD16P31244 790 aa3.45□□□□□ -1.86
RPC40YPR110C MRPL9P31334 269 aa3.45□□□□□ -1.86
RPC40YPR110C HES1P35843 434 aa3.45□□□□□ -1.86
RPC40YPR110C TEF4P36008 412 aaKnown RBP3.45□□□□□ -1.86
RPC40YPR110C PAC2P39937 518 aa3.45□□□□□ -1.86
RPC40YPR110C TDA10P42938 290 aa3.45□□□□□ -1.86
RPC40YPR110C YFL015CP43578 164 aa3.45□□□□□ -1.86
RPC40YPR110C UBP16Q02863 499 aa3.45□□□□□ -1.86
RPC40YPR110C YML119WQ03208 357 aa3.45□□□□□ -1.86
RPC40YPR110C WAR1Q03631 944 aa3.45□□□□□ -1.86
RPC40YPR110C RAD33Q04231 177 aa3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 36.8 ms