RNA–Protein interactions for RNA: YCR085W

YCR085W, Transcript of Dubious open reading frame, yeast

Gene YCR085W, Length 354 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCR085W	YCR085W	CRD1	Q07560	283 aa		4.41	□□□□□ -1.7
YCR085W	YCR085W	NSE1	Q07913	336 aa		4.41	□□□□□ -1.7
YCR085W	YCR085W	DSE3	Q08729	430 aa		4.41	□□□□□ -1.7
YCR085W	YCR085W	PRP8	P33334	2413 aa	Known RBP	4.41	□□□□□ -1.7
YCR085W	YCR085W	MET6	P05694	767 aa	Known RBP	4.4	□□□□□ -1.71
YCR085W	YCR085W	OPI1	P21957	404 aa		4.4	□□□□□ -1.71
YCR085W	YCR085W	PCM1	P38628	557 aa	Known RBP	4.4	□□□□□ -1.71
YCR085W	YCR085W	RFC1	P38630	861 aa	Known RBP	4.4	□□□□□ -1.71
YCR085W	YCR085W	NMD2	P38798	1089 aa	Known RBP	4.4	□□□□□ -1.71
YCR085W	YCR085W	SFB3	P38810	929 aa		4.4	□□□□□ -1.71
YCR085W	YCR085W	TPM2	P40414	161 aa		4.4	□□□□□ -1.71
YCR085W	YCR085W	CCT7	P42943	550 aa	Known RBP	4.4	□□□□□ -1.71
YCR085W	YCR085W	ALG2	P43636	503 aa		4.4	□□□□□ -1.71
YCR085W	YCR085W	YGL081W	P53156	320 aa		4.4	□□□□□ -1.71
YCR085W	YCR085W	HMG2	P12684	1045 aa		4.39	□□□□□ -1.71
YCR085W	YCR085W	ADE2	P21264	571 aa	Known RBP	4.39	□□□□□ -1.71
YCR085W	YCR085W	FMO1	P38866	432 aa		4.39	□□□□□ -1.71
YCR085W	YCR085W	CCT3	P39077	534 aa	Known RBP	4.39	□□□□□ -1.71
YCR085W	YCR085W	ASE1	P50275	885 aa		4.39	□□□□□ -1.71
YCR085W	YCR085W	YHM2	Q04013	314 aa		4.39	□□□□□ -1.71
YCR085W	YCR085W	YDR514C	Q04408	483 aa		4.39	□□□□□ -1.71
YCR085W	YCR085W	HOF1	Q05080	669 aa		4.39	□□□□□ -1.71
YCR085W	YCR085W	PKH2	Q12236	1081 aa	Known RBP	4.39	□□□□□ -1.71
YCR085W	YCR085W	RVB2	Q12464	471 aa	Known RBP	4.39	□□□□□ -1.71
YCR085W	YCR085W	ADE4	P04046	510 aa	Known RBP	4.38	□□□□□ -1.71
YCR085W	YCR085W	PYC1	P11154	1178 aa	Known RBP	4.38	□□□□□ -1.71
YCR085W	YCR085W	WHI2	P12611	486 aa		4.38	□□□□□ -1.71
YCR085W	YCR085W	MSH2	P25847	964 aa		4.38	□□□□□ -1.71
YCR085W	YCR085W	HIS7	P33734	552 aa	Known RBP	4.38	□□□□□ -1.71
YCR085W	YCR085W	BET3	P36149	193 aa		4.38	□□□□□ -1.71
YCR085W	YCR085W	YJL206C	P39529	758 aa		4.38	□□□□□ -1.71
YCR085W	YCR085W	RLP7	P40693	322 aa	Known RBP	4.38	□□□□□ -1.71
YCR085W	YCR085W	ZPR1	P53303	486 aa	Known RBP	4.38	□□□□□ -1.71
YCR085W	YCR085W	YNR061C	P53747	219 aa		4.38	□□□□□ -1.71
YCR085W	YCR085W	ORC4	P54791	529 aa		4.38	□□□□□ -1.71
YCR085W	YCR085W	APM1	Q00776	475 aa	Predicted RBP	4.38	□□□□□ -1.71
YCR085W	YCR085W	LEE1	Q02799	301 aa	Known RBP	4.38	□□□□□ -1.71
YCR085W	YCR085W	BRE1	Q07457	700 aa	Known RBP	4.38	□□□□□ -1.71
YCR085W	YCR085W	PDR3	P33200	976 aa		4.37	□□□□□ -1.71
YCR085W	YCR085W	SPC29	P33419	253 aa		4.37	□□□□□ -1.71
YCR085W	YCR085W	SAP190	P36123	1033 aa		4.37	□□□□□ -1.71
YCR085W	YCR085W	REV7	P38927	245 aa		4.37	□□□□□ -1.71
YCR085W	YCR085W	EAF5	P39995	279 aa		4.37	□□□□□ -1.71
YCR085W	YCR085W	NDC80	P40460	691 aa		4.37	□□□□□ -1.71
YCR085W	YCR085W	LAM5	P43560	674 aa		4.37	□□□□□ -1.71
YCR085W	YCR085W	TY4A-J	P47023	414 aa		4.37	□□□□□ -1.71
YCR085W	YCR085W	MTR3	P48240	250 aa	Predicted RBP	4.37	□□□□□ -1.71
YCR085W	YCR085W	STP1	Q00947	519 aa		4.37	□□□□□ -1.71
YCR085W	YCR085W	GAD1	Q04792	585 aa		4.37	□□□□□ -1.71
YCR085W	YCR085W	TFC6	Q06339	672 aa		4.37	□□□□□ -1.71
YCR085W	YCR085W	HIF1	Q12373	385 aa		4.37	□□□□□ -1.71
YCR085W	YCR085W	YKL033W-A	Q86ZR7	236 aa		4.37	□□□□□ -1.71
YCR085W	YCR085W	CSF1	Q12150	2958 aa		4.37	□□□□□ -1.71
YCR085W	YCR085W	RPN13	O13563	156 aa		4.36	□□□□□ -1.71
YCR085W	YCR085W	PGK1	P00560	416 aa	Known RBP	4.36	□□□□□ -1.71
YCR085W	YCR085W	PCK1	P10963	549 aa		4.36	□□□□□ -1.71
YCR085W	YCR085W	PDE1	P22434	369 aa		4.36	□□□□□ -1.71
YCR085W	YCR085W	RSA4	P25382	515 aa	Known RBP	4.36	□□□□□ -1.71
YCR085W	YCR085W	PEX34	P25584	144 aa		4.36	□□□□□ -1.71
YCR085W	YCR085W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
YCR085W	YCR085W	UBS1	P38290	277 aa		4.36	□□□□□ -1.71
YCR085W	YCR085W	CBR1	P38626	284 aa	Known RBP	4.36	□□□□□ -1.71
YCR085W	YCR085W	YPT35	P38815	214 aa	Known RBP	4.36	□□□□□ -1.71
YCR085W	YCR085W	BDH2	P39713	417 aa		4.36	□□□□□ -1.71
YCR085W	YCR085W	ARG2	P40360	574 aa		4.36	□□□□□ -1.71
YCR085W	YCR085W	VID28	P40547	921 aa		4.36	□□□□□ -1.71
YCR085W	YCR085W	NSE5	Q03718	556 aa		4.36	□□□□□ -1.71
YCR085W	YCR085W	GYL1	Q04322	720 aa		4.36	□□□□□ -1.71
YCR085W	YCR085W	PHM6	Q05637	104 aa		4.36	□□□□□ -1.71
YCR085W	YCR085W	SPN1	Q06505	410 aa	Predicted RBP	4.36	□□□□□ -1.71
YCR085W	YCR085W	CDC45	Q08032	650 aa		4.36	□□□□□ -1.71
YCR085W	YCR085W	PLP2	Q12017	286 aa		4.36	□□□□□ -1.71
YCR085W	YCR085W	YOR111W	Q99210	232 aa		4.36	□□□□□ -1.71
YCR085W	YCR085W	DIF1	O13577	133 aa		4.35	□□□□□ -1.71
YCR085W	YCR085W	TOM70	P07213	617 aa	Known RBP	4.35	□□□□□ -1.71
YCR085W	YCR085W	CIT2	P08679	460 aa		4.35	□□□□□ -1.71
YCR085W	YCR085W	MAS1	P10507	462 aa		4.35	□□□□□ -1.71
YCR085W	YCR085W	HEL1	P36113	551 aa		4.35	□□□□□ -1.71
YCR085W	YCR085W	MED6	P38782	295 aa		4.35	□□□□□ -1.71
YCR085W	YCR085W	CRG1	P38892	291 aa	RIP-Chip data	4.35	□□□□□ -1.71	not detected
YCR085W	YCR085W	YEL020C	P39994	560 aa		4.35	□□□□□ -1.71
YCR085W	YCR085W	FHN1	P53279	174 aa		4.35	□□□□□ -1.71
YCR085W	YCR085W	COQ9	Q05779	260 aa		4.35	□□□□□ -1.71
YCR085W	YCR085W	FLC1	Q08967	793 aa		4.35	□□□□□ -1.71
YCR085W	YCR085W	HFI1	Q12060	488 aa		4.35	□□□□□ -1.71
YCR085W	YCR085W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.34	□□□□□ -1.71	not detected
YCR085W	YCR085W	GLN3	P18494	730 aa		4.34	□□□□□ -1.71
YCR085W	YCR085W	PGS1	P25578	521 aa		4.34	□□□□□ -1.71
YCR085W	YCR085W	TMT1	P32643	299 aa		4.34	□□□□□ -1.71
YCR085W	YCR085W	EMP70	P32802	667 aa		4.34	□□□□□ -1.71
YCR085W	YCR085W	GPD2	P41911	440 aa	Known RBP	4.34	□□□□□ -1.71
YCR085W	YCR085W	TIM54	P47045	478 aa		4.34	□□□□□ -1.71
YCR085W	YCR085W	RTA1	P53047	317 aa		4.34	□□□□□ -1.71
YCR085W	YCR085W	ARG5,6	Q01217	863 aa		4.34	□□□□□ -1.71
YCR085W	YCR085W	YDR338C	Q05497	695 aa		4.34	□□□□□ -1.71
YCR085W	YCR085W	MCM21	Q06675	368 aa		4.34	□□□□□ -1.71
YCR085W	YCR085W	AFT2	Q08957	416 aa		4.34	□□□□□ -1.71
YCR085W	YCR085W	PDH1	Q12428	516 aa	Known RBP	4.34	□□□□□ -1.71
YCR085W	YCR085W	UTP20	P35194	2493 aa	Known RBP	4.34	□□□□□ -1.72
YCR085W	YCR085W	CET1	O13297	549 aa	Predicted RBP	4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 226.6 ms