RNA–Protein interactions for RNA: YAL009W

SPO7, Transcript of Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme, yeastyeast

Gene SPO7, Length 780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO7YAL009W SEN1Q00416 2231 aaKnown RBP6.12□□□□□ -1.43
SPO7YAL009W YPL014WQ02606 381 aa6.12□□□□□ -1.43
SPO7YAL009W ECM38Q05902 660 aaPredicted RBP6.12□□□□□ -1.43
SPO7YAL009W YPR078CQ06813 372 aa6.12□□□□□ -1.43
SPO7YAL009W SIL1Q08199 421 aa6.12□□□□□ -1.43
SPO7YAL009W YOR059CQ08448 450 aaKnown RBP6.12□□□□□ -1.43
SPO7YAL009W FLC1Q08967 793 aa6.12□□□□□ -1.43
SPO7YAL009W ARP7Q12406 477 aa6.12□□□□□ -1.43
SPO7YAL009W EST1P17214 699 aaPredicted RBP6.11□□□□□ -1.43
SPO7YAL009W VMA4P22203 233 aaKnown RBP6.11□□□□□ -1.43
SPO7YAL009W IME2P32581 645 aa6.11□□□□□ -1.43
SPO7YAL009W LIP5P32875 414 aa6.11□□□□□ -1.43
SPO7YAL009W SAP190P36123 1033 aa6.11□□□□□ -1.43
SPO7YAL009W NMD3P38861 518 aaKnown RBP6.11□□□□□ -1.43
SPO7YAL009W GIP4P39732 760 aa6.11□□□□□ -1.43
SPO7YAL009W VEL1P53058 206 aa6.11□□□□□ -1.43
SPO7YAL009W RSC1P53236 928 aa6.11□□□□□ -1.43
SPO7YAL009W TRM112P53738 135 aaPredicted RBP6.11□□□□□ -1.43
SPO7YAL009W ELP3Q02908 557 aaKnown RBP6.11□□□□□ -1.43
SPO7YAL009W UME1Q03010 460 aa6.11□□□□□ -1.43
SPO7YAL009W PMT7Q06644 662 aa6.11□□□□□ -1.43
SPO7YAL009W APC5Q08683 685 aa6.11□□□□□ -1.43
SPO7YAL009W NUM1Q00402 2748 aa6.1□□□□□ -1.43
SPO7YAL009W PAB1P04147 577 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43not detected
SPO7YAL009W MSF1P08425 469 aa6.1□□□□□ -1.43
SPO7YAL009W HSF1P10961 833 aa6.1□□□□□ -1.43
SPO7YAL009W KAR3P17119 729 aa6.1□□□□□ -1.43
SPO7YAL009W SRB2P34162 210 aa6.1□□□□□ -1.43
SPO7YAL009W PXL1P36166 706 aa6.1□□□□□ -1.43
SPO7YAL009W ARL1P38116 183 aaKnown RBP6.1□□□□□ -1.43
SPO7YAL009W KTR4P38131 464 aa6.1□□□□□ -1.43
SPO7YAL009W HSL7P38274 827 aa6.1□□□□□ -1.43
SPO7YAL009W PPX1P38698 397 aa6.1□□□□□ -1.43
SPO7YAL009W GGA2P38817 585 aaKnown RBP6.1□□□□□ -1.43
SPO7YAL009W RTT107P38850 1070 aa6.1□□□□□ -1.43
SPO7YAL009W VFA1P40080 203 aa6.1□□□□□ -1.43
SPO7YAL009W YER189WP40104 122 aa6.1□□□□□ -1.43
SPO7YAL009W HOP2P53187 214 aa6.1□□□□□ -1.43
SPO7YAL009W RSC4Q02206 625 aa6.1□□□□□ -1.43
SPO7YAL009W RPN4Q03465 531 aa6.1□□□□□ -1.43
SPO7YAL009W AIM32Q04689 311 aa6.1□□□□□ -1.43
SPO7YAL009W RTN1Q04947 295 aaKnown RBP6.1□□□□□ -1.43
SPO7YAL009W YCG1Q06680 1035 aa6.1□□□□□ -1.43
SPO7YAL009W PUF2Q12221 1075 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43not detected
SPO7YAL009W CYC7P00045 113 aa6.09□□□□□ -1.43
SPO7YAL009W ARF2P19146 181 aaKnown RBP6.09□□□□□ -1.43
SPO7YAL009W SEA4P38164 1038 aa6.09□□□□□ -1.43
SPO7YAL009W YHR219WP38900 624 aa6.09□□□□□ -1.43
SPO7YAL009W DUN1P39009 513 aa6.09□□□□□ -1.43
SPO7YAL009W OSW5P40219 148 aa6.09□□□□□ -1.43
SPO7YAL009W UBP7P40453 1071 aa6.09□□□□□ -1.43
SPO7YAL009W SNZ3P43545 298 aa6.09□□□□□ -1.43
SPO7YAL009W SNZ2P53824 298 aa6.09□□□□□ -1.43
SPO7YAL009W INA17Q02888 182 aa6.09□□□□□ -1.43
SPO7YAL009W YDR222WQ04925 415 aa6.09□□□□□ -1.43
SPO7YAL009W AIM39Q08223 395 aa6.09□□□□□ -1.43
SPO7YAL009W NDD1Q08887 554 aa6.09□□□□□ -1.43
SPO7YAL009W SVS1Q12254 260 aa6.09□□□□□ -1.43
SPO7YAL009W PUT4P15380 627 aa6.08□□□□□ -1.44
SPO7YAL009W YIH1P25637 258 aa6.08□□□□□ -1.44
SPO7YAL009W PUB1P32588 453 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
SPO7YAL009W SGE1P33335 543 aa6.08□□□□□ -1.44
SPO7YAL009W TCD2P36101 447 aaKnown RBP6.08□□□□□ -1.44
SPO7YAL009W JNM1P36224 373 aa6.08□□□□□ -1.44
SPO7YAL009W RIM11P38615 370 aa6.08□□□□□ -1.44
SPO7YAL009W URA8P38627 578 aaPredicted RBP6.08□□□□□ -1.44
SPO7YAL009W YGR283CP53336 341 aaPredicted RBP6.08□□□□□ -1.44
SPO7YAL009W KTR6P54070 446 aa6.08□□□□□ -1.44
SPO7YAL009W YMR206WQ03695 313 aa6.08□□□□□ -1.44
SPO7YAL009W GYL1Q04322 720 aa6.08□□□□□ -1.44
SPO7YAL009W YLR287CQ05881 355 aa6.08□□□□□ -1.44
SPO7YAL009W YCS4Q06156 1176 aa6.08□□□□□ -1.44
SPO7YAL009W NUT2Q06213 157 aa6.08□□□□□ -1.44
SPO7YAL009W BRE4Q07660 1125 aa6.08□□□□□ -1.44
SPO7YAL009W THI20Q08224 551 aa6.08□□□□□ -1.44
SPO7YAL009W HMI1Q12039 706 aa6.08□□□□□ -1.44
SPO7YAL009W RRP6Q12149 733 aaKnown RBP6.08□□□□□ -1.44
SPO7YAL009W SPO21Q12411 609 aa6.08□□□□□ -1.44
SPO7YAL009W CMR1Q12510 522 aaKnown RBP6.08□□□□□ -1.44
SPO7YAL009W RPL40AP0CH08 128 aaKnown RBP6.07□□□□□ -1.44
SPO7YAL009W RPL40BP0CH09 128 aaKnown RBP6.07□□□□□ -1.44
SPO7YAL009W SPO12P17123 173 aa6.07□□□□□ -1.44
SPO7YAL009W NPR1P22211 790 aa6.07□□□□□ -1.44
SPO7YAL009W YKL050CP35736 922 aa6.07□□□□□ -1.44
SPO7YAL009W RKM3P38222 552 aa6.07□□□□□ -1.44
SPO7YAL009W TDA3P38758 523 aa6.07□□□□□ -1.44
SPO7YAL009W GDH3P39708 457 aa6.07□□□□□ -1.44
SPO7YAL009W TFG2P41896 400 aaPredicted RBP6.07□□□□□ -1.44
SPO7YAL009W TDA7P53882 636 aaPredicted RBP6.07□□□□□ -1.44
SPO7YAL009W SMA1Q02651 245 aa6.07□□□□□ -1.44
SPO7YAL009W ARA2Q04212 335 aa6.07□□□□□ -1.44
SPO7YAL009W GIC2Q06648 383 aa6.07□□□□□ -1.44
SPO7YAL009W PIN2Q12057 282 aa6.07□□□□□ -1.44
SPO7YAL009W VPS5Q92331 675 aa6.07□□□□□ -1.44
SPO7YAL009W PHO13P19881 312 aa6.06□□□□□ -1.44
SPO7YAL009W SEC1P30619 724 aaKnown RBP6.06□□□□□ -1.44
SPO7YAL009W STE13P33894 931 aa6.06□□□□□ -1.44
SPO7YAL009W LYS9P38999 446 aa6.06□□□□□ -1.44
SPO7YAL009W YIL054WP40524 105 aa6.06□□□□□ -1.44
SPO7YAL009W BST1P43571 1029 aa6.06□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 53 ms