RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 CMYA5Q8N3K9 4069 aa6.92□□□□□ -1.3
NEDD4L-238ENST00000635997 DNAH11Q96DT5 4516 aa6.9□□□□□ -1.3
NEDD4L-238ENST00000635997 ALMS1Q8TCU4 4167 aa6.87□□□□□ -1.31
NEDD4L-238ENST00000635997 DNAH17Q9UFH2 4485 aa6.86□□□□□ -1.31
NEDD4L-238ENST00000635997 LYSTQ99698 3801 aa6.86□□□□□ -1.31
NEDD4L-238ENST00000635997 PRKDCP78527 4128 aaKnown RBP6.85□□□□□ -1.31
NEDD4L-238ENST00000635997 KRTAP17-1Q9BYP8 105 aa6.85□□□□□ -1.31
NEDD4L-238ENST00000635997 KRTAP12-2P59991 146 aa6.84□□□□□ -1.31
NEDD4L-238ENST00000635997 RYR3Q15413 4870 aa6.82□□□□□ -1.32
NEDD4L-238ENST00000635997 KRTAP13-4Q3LI77 160 aa6.81□□□□□ -1.32
NEDD4L-238ENST00000635997 FAT1Q14517 4588 aa6.81□□□□□ -1.32
NEDD4L-238ENST00000635997 BIRC6Q9NR09 4857 aa6.8□□□□□ -1.32
NEDD4L-238ENST00000635997 DNAH8Q96JB1 4490 aa6.8□□□□□ -1.32
NEDD4L-238ENST00000635997 KRTAP15-1Q3LI76 137 aa6.8□□□□□ -1.32
NEDD4L-238ENST00000635997 KMT2AQ03164 3969 aa6.78□□□□□ -1.32
NEDD4L-238ENST00000635997 DNAH2Q9P225 4427 aa6.75□□□□□ -1.33
NEDD4L-238ENST00000635997 PP632Q6XCG6 107 aa6.74□□□□□ -1.33
NEDD4L-238ENST00000635997 HYDINQ4G0P3 5121 aa6.73□□□□□ -1.33
NEDD4L-238ENST00000635997 DNAH7Q8WXX0 4024 aa6.73□□□□□ -1.33
NEDD4L-238ENST00000635997 DYNC1H1Q14204 4646 aaKnown RBP6.73□□□□□ -1.33
NEDD4L-238ENST00000635997 LRP1BQ9NZR2 4599 aa6.71□□□□□ -1.33
NEDD4L-238ENST00000635997 KRTAP12-1P59990 96 aa6.71□□□□□ -1.34
NEDD4L-238ENST00000635997 KRTAP10-6P60371 365 aaPredicted RBP6.71□□□□□ -1.34
NEDD4L-238ENST00000635997 DYNC2H1Q8NCM8 4307 aaKnown RBP6.67□□□□□ -1.34
NEDD4L-238ENST00000635997 HERC2O95714 4834 aa6.65□□□□□ -1.35
NEDD4L-238ENST00000635997 FRAS1Q86XX4 4008 aa6.63□□□□□ -1.35
NEDD4L-238ENST00000635997 HECTD4Q9Y4D8 3996 aa6.61□□□□□ -1.35
NEDD4L-238ENST00000635997 KRTAP3-3Q9BYR6 98 aa6.58□□□□□ -1.36
NEDD4L-238ENST00000635997 DNAH6Q9C0G6 4158 aa6.56□□□□□ -1.36
NEDD4L-238ENST00000635997 MYCBP2O75592 4640 aa6.55□□□□□ -1.36
NEDD4L-238ENST00000635997 KRTAP3-2Q9BYR7 98 aa6.52□□□□□ -1.37
NEDD4L-238ENST00000635997 VPS13BQ7Z7G8 4022 aa6.52□□□□□ -1.37
NEDD4L-238ENST00000635997 RYR2Q92736 4967 aa6.49□□□□□ -1.37
NEDD4L-238ENST00000635997 FAT3Q8TDW7 4589 aa6.42□□□□□ -1.38
NEDD4L-238ENST00000635997 SACSQ9NZJ4 4579 aa6.41□□□□□ -1.38
NEDD4L-238ENST00000635997 LORP23490 312 aaPredicted RBP6.39□□□□□ -1.39
NEDD4L-238ENST00000635997 KRTAP4-1Q9BYQ7 146 aa6.38□□□□□ -1.39
NEDD4L-238ENST00000635997 FAT2Q9NYQ8 4349 aa6.37□□□□□ -1.39
NEDD4L-238ENST00000635997 PCLOQ9Y6V0 5065 aa6.36□□□□□ -1.39
NEDD4L-238ENST00000635997 KMT2CQ8NEZ4 4911 aaKnown RBP6.36□□□□□ -1.39
NEDD4L-238ENST00000635997 MT1HP80294 61 aa6.36□□□□□ -1.39
NEDD4L-238ENST00000635997 LRP1Q07954 4544 aaKnown RBP6.3□□□□□ -1.4
NEDD4L-238ENST00000635997 APOBP04114 4563 aaKnown RBP6.26□□□□□ -1.41
NEDD4L-238ENST00000635997 PKHD1P08F94 4074 aa6.26□□□□□ -1.41
NEDD4L-238ENST00000635997 PKD1P98161 4303 aa6.2□□□□□ -1.42
NEDD4L-238ENST00000635997 EPPK1P58107 5090 aaKnown RBP6.17□□□□□ -1.42
NEDD4L-238ENST00000635997 KRTAP10-12P60413 245 aa6.14□□□□□ -1.43
NEDD4L-238ENST00000635997 MT2AP02795 61 aa6.13□□□□□ -1.43
NEDD4L-238ENST00000635997 CRCT1Q9UGL9 99 aa6.11□□□□□ -1.43
NEDD4L-238ENST00000635997 LRP2P98164 4655 aa6.09□□□□□ -1.43
NEDD4L-238ENST00000635997 HERC1Q15751 4861 aa6.09□□□□□ -1.43
NEDD4L-238ENST00000635997 KRTAP8-1Q8IUC2 63 aa6.08□□□□□ -1.44
NEDD4L-238ENST00000635997 ABCA13Q86UQ4 5058 aa6.07□□□□□ -1.44
NEDD4L-238ENST00000635997 UBR4Q5T4S7 5183 aa6.05□□□□□ -1.44
NEDD4L-238ENST00000635997 MT1FP04733 61 aa6□□□□□ -1.45
NEDD4L-238ENST00000635997 KRTAP9-2Q9BYQ4 174 aa5.98□□□□□ -1.45
NEDD4L-238ENST00000635997 LCE3AQ5TA76 89 aa5.98□□□□□ -1.45
NEDD4L-238ENST00000635997 KRTAP12-3P60328 96 aa5.97□□□□□ -1.45
NEDD4L-238ENST00000635997 HSPG2P98160 4391 aa5.95□□□□□ -1.46
NEDD4L-238ENST00000635997 FSIP2Q5CZC0 6907 aa5.92□□□□□ -1.46
NEDD4L-238ENST00000635997 INE1O15225 51 aa5.89□□□□□ -1.47
NEDD4L-238ENST00000635997 SPRR2FQ96RM1 72 aa5.89□□□□□ -1.47
NEDD4L-238ENST00000635997 PKHD1L1Q86WI1 4243 aa5.87□□□□□ -1.47
NEDD4L-238ENST00000635997 KRTAP9-6A0A140TA67 174 aa5.83□□□□□ -1.48
NEDD4L-238ENST00000635997 TNXBP22105 4242 aa5.79□□□□□ -1.48
NEDD4L-238ENST00000635997 SPRR2GQ9BYE4 73 aa5.75□□□□□ -1.49
NEDD4L-238ENST00000635997 LPAP08519 4548 aa5.71□□□□□ -1.49
NEDD4L-238ENST00000635997 RNF213Q63HN8 5207 aa5.71□□□□□ -1.49
NEDD4L-238ENST00000635997 LCE2CQ5TA81 110 aa5.69□□□□□ -1.5
NEDD4L-238ENST00000635997 KRTAP19-1Q8IUB9 90 aa5.67□□□□□ -1.5
NEDD4L-238ENST00000635997 KRTAP9-8Q9BYQ0 159 aa5.64□□□□□ -1.51
NEDD4L-238ENST00000635997 SPRR2EP22531 72 aa5.63□□□□□ -1.51
NEDD4L-238ENST00000635997 SPRR2BP35325 72 aa5.63□□□□□ -1.51
NEDD4L-238ENST00000635997 SPRR2AP35326 72 aa5.63□□□□□ -1.51
NEDD4L-238ENST00000635997 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
NEDD4L-238ENST00000635997 LCE2AQ5TA79 106 aaPredicted RBP5.56□□□□□ -1.52
NEDD4L-238ENST00000635997 SYNE1Q8NF91 8797 aaKnown RBP5.54□□□□□ -1.52
NEDD4L-238ENST00000635997 LCE2DQ5TA82 110 aaPredicted RBP5.52□□□□□ -1.53
NEDD4L-238ENST00000635997 KRTAP9-3Q9BYQ3 159 aa5.51□□□□□ -1.53
NEDD4L-238ENST00000635997 FAT4Q6V0I7 4981 aa5.51□□□□□ -1.53
NEDD4L-238ENST00000635997 HMCN2Q8NDA2 5059 aa5.48□□□□□ -1.53
NEDD4L-238ENST00000635997 KRTAP10-7P60409 375 aaPredicted RBP5.47□□□□□ -1.53
NEDD4L-238ENST00000635997 KRTAP19-5Q3LI72 72 aa5.47□□□□□ -1.53
NEDD4L-238ENST00000635997 KRTAP10-5P60370 271 aa5.47□□□□□ -1.53
NEDD4L-238ENST00000635997 KRTAP19-2Q3LHN2 52 aa5.46□□□□□ -1.54
NEDD4L-238ENST00000635997 KRTAP19-8Q3LI54 63 aa5.46□□□□□ -1.54
NEDD4L-238ENST00000635997 SPRR2DP22532 72 aa5.45□□□□□ -1.54
NEDD4L-238ENST00000635997 LCE2BO14633 110 aa5.41□□□□□ -1.54
NEDD4L-238ENST00000635997 KRTAP9-7A8MTY7 169 aa5.4□□□□□ -1.54
NEDD4L-238ENST00000635997 MT1BP07438 61 aa5.37□□□□□ -1.55
NEDD4L-238ENST00000635997 MUC2Q02817 5179 aa5.35□□□□□ -1.55
NEDD4L-238ENST00000635997 SPRR5A0A1B0GTR4 108 aa5.34□□□□□ -1.55
NEDD4L-238ENST00000635997 MUC17Q685J3 4493 aa5.33□□□□□ -1.56
NEDD4L-238ENST00000635997 MT1XP80297 61 aa5.33□□□□□ -1.56
NEDD4L-238ENST00000635997 KRTAP4-8A0A0G2JLE6 195 aa5.33□□□□□ -1.56
NEDD4L-238ENST00000635997 KRTAP4-8Q9BYQ9 185 aa5.33□□□□□ -1.56
NEDD4L-238ENST00000635997 FLGP20930 4061 aaPredicted RBP5.29□□□□□ -1.56
NEDD4L-238ENST00000635997 OBSCNQ5VST9 7968 aa5.29□□□□□ -1.56
NEDD4L-238ENST00000635997 KRTAP19-6Q3LI70 58 aa5.24□□□□□ -1.57
NEDD4L-238ENST00000635997 SYNE2Q8WXH0 6885 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms