RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 HECTD4Q9Y4D8 3996 aa7.79□□□□□ -1.16
SYNRG-223ENST00000616179 DNAH6Q9C0G6 4158 aa7.78□□□□□ -1.16
SYNRG-223ENST00000616179 VPS13DQ5THJ4 4388 aa7.77□□□□□ -1.17
SYNRG-223ENST00000616179 XP32Q5T750 250 aa7.76□□□□□ -1.17
SYNRG-223ENST00000616179 Q5VSD8 79 aa7.67□□□□□ -1.18
SYNRG-223ENST00000616179 VPS13BQ7Z7G8 4022 aa7.67□□□□□ -1.18
SYNRG-223ENST00000616179 FAT1Q14517 4588 aa7.61□□□□□ -1.19
SYNRG-223ENST00000616179 PRKDCP78527 4128 aaKnown RBP7.59□□□□□ -1.19
SYNRG-223ENST00000616179 DNAH5Q8TE73 4624 aa7.59□□□□□ -1.2
SYNRG-223ENST00000616179 MYCBP2O75592 4640 aa7.55□□□□□ -1.2
SYNRG-223ENST00000616179 DYNC2H1Q8NCM8 4307 aaKnown RBP7.43□□□□□ -1.22
SYNRG-223ENST00000616179 DYNC1H1Q14204 4646 aaKnown RBP7.38□□□□□ -1.23
SYNRG-223ENST00000616179 PP632Q6XCG6 107 aa7.37□□□□□ -1.23
SYNRG-223ENST00000616179 APOBP04114 4563 aaKnown RBP7.36□□□□□ -1.23
SYNRG-223ENST00000616179 KRTAP10-4P60372 401 aaPredicted RBP7.33□□□□□ -1.24
SYNRG-223ENST00000616179 TNP1P09430 55 aa7.31□□□□□ -1.24
SYNRG-223ENST00000616179 SACSQ9NZJ4 4579 aa7.31□□□□□ -1.24
SYNRG-223ENST00000616179 HYDINQ4G0P3 5121 aa7.3□□□□□ -1.24
SYNRG-223ENST00000616179 SEC61BP60468 96 aaKnown RBP7.28□□□□□ -1.24
SYNRG-223ENST00000616179 A0A1B0GVY2 172 aa7.27□□□□□ -1.24
SYNRG-223ENST00000616179 J3QL48 77 aa7.26□□□□□ -1.25
SYNRG-223ENST00000616179 LORP23490 312 aaPredicted RBP7.26□□□□□ -1.25
SYNRG-223ENST00000616179 DNHD1Q96M86 4753 aa7.26□□□□□ -1.25
SYNRG-223ENST00000616179 FAT2Q9NYQ8 4349 aa7.26□□□□□ -1.25
SYNRG-223ENST00000616179 PKHD1P08F94 4074 aa7.25□□□□□ -1.25
SYNRG-223ENST00000616179 LRP1Q07954 4544 aaKnown RBP7.24□□□□□ -1.25
SYNRG-223ENST00000616179 FAT3Q8TDW7 4589 aa7.15□□□□□ -1.26
SYNRG-223ENST00000616179 HSPG2P98160 4391 aa7.09□□□□□ -1.27
SYNRG-223ENST00000616179 PKD1P98161 4303 aa7.07□□□□□ -1.28
SYNRG-223ENST00000616179 M0R2T5 61 aa7.04□□□□□ -1.28
SYNRG-223ENST00000616179 LRP2P98164 4655 aa7□□□□□ -1.29
SYNRG-223ENST00000616179 MT1HL1P0DM35 61 aa6.98□□□□□ -1.29
SYNRG-223ENST00000616179 KMT2CQ8NEZ4 4911 aaKnown RBP6.87□□□□□ -1.31
SYNRG-223ENST00000616179 LPAP08519 4548 aa6.85□□□□□ -1.31
SYNRG-223ENST00000616179 RYR1P21817 5038 aa6.83□□□□□ -1.32
SYNRG-223ENST00000616179 KIAA1109Q2LD37 5005 aa6.77□□□□□ -1.33
SYNRG-223ENST00000616179 PKHD1L1Q86WI1 4243 aa6.77□□□□□ -1.33
SYNRG-223ENST00000616179 PRO2289Q9P1D8 64 aa6.75□□□□□ -1.33
SYNRG-223ENST00000616179 KRTAP4-1Q9BYQ7 146 aa6.7□□□□□ -1.34
SYNRG-223ENST00000616179 KRTAP17-1Q9BYP8 105 aa6.66□□□□□ -1.34
SYNRG-223ENST00000616179 KRTAP4-5Q9BYR2 181 aa6.62□□□□□ -1.35
SYNRG-223ENST00000616179 TNXBP22105 4242 aa6.61□□□□□ -1.35
SYNRG-223ENST00000616179 LCE3AQ5TA76 89 aa6.61□□□□□ -1.35
SYNRG-223ENST00000616179 RYR3Q15413 4870 aa6.59□□□□□ -1.35
SYNRG-223ENST00000616179 KRTAP10-10P60014 251 aa6.57□□□□□ -1.36
SYNRG-223ENST00000616179 INE1O15225 51 aa6.56□□□□□ -1.36
SYNRG-223ENST00000616179 KRTAP23-1A1A580 65 aa6.49□□□□□ -1.37
SYNRG-223ENST00000616179 RYR2Q92736 4967 aa6.47□□□□□ -1.37
SYNRG-223ENST00000616179 SPRR5A0A1B0GTR4 108 aa6.43□□□□□ -1.38
SYNRG-223ENST00000616179 KRTAP21-3Q3LHN1 58 aa6.37□□□□□ -1.39
SYNRG-223ENST00000616179 ABCA13Q86UQ4 5058 aa6.35□□□□□ -1.39
SYNRG-223ENST00000616179 MUC2Q02817 5179 aa6.35□□□□□ -1.39
SYNRG-223ENST00000616179 KRTAP12-3P60328 96 aa6.33□□□□□ -1.4
SYNRG-223ENST00000616179 EPPK1P58107 5090 aaKnown RBP6.3□□□□□ -1.4
SYNRG-223ENST00000616179 KRTAP10-12P60413 245 aa6.25□□□□□ -1.41
SYNRG-223ENST00000616179 SPRR2GQ9BYE4 73 aa6.11□□□□□ -1.43
SYNRG-223ENST00000616179 KRTAP19-1Q8IUB9 90 aa6.1□□□□□ -1.43
SYNRG-223ENST00000616179 KRTAP19-2Q3LHN2 52 aa6.09□□□□□ -1.43
SYNRG-223ENST00000616179 KRTAP8-1Q8IUC2 63 aa6.09□□□□□ -1.43
SYNRG-223ENST00000616179 MUC17Q685J3 4493 aa6.07□□□□□ -1.44
SYNRG-223ENST00000616179 FAT4Q6V0I7 4981 aa6.06□□□□□ -1.44
SYNRG-223ENST00000616179 HERC2O95714 4834 aa6.03□□□□□ -1.44
SYNRG-223ENST00000616179 FLGP20930 4061 aaPredicted RBP5.98□□□□□ -1.45
SYNRG-223ENST00000616179 MT1FP04733 61 aa5.97□□□□□ -1.45
SYNRG-223ENST00000616179 MT2AP02795 61 aa5.93□□□□□ -1.46
SYNRG-223ENST00000616179 KRTAP10-7P60409 375 aaPredicted RBP5.9□□□□□ -1.46
SYNRG-223ENST00000616179 MT1HP80294 61 aa5.87□□□□□ -1.47
SYNRG-223ENST00000616179 PCLOQ9Y6V0 5065 aa5.84□□□□□ -1.47
SYNRG-223ENST00000616179 HMCN2Q8NDA2 5059 aa5.83□□□□□ -1.48
SYNRG-223ENST00000616179 KRTAP19-5Q3LI72 72 aa5.83□□□□□ -1.48
SYNRG-223ENST00000616179 KRTAP10-5P60370 271 aa5.82□□□□□ -1.48
SYNRG-223ENST00000616179 MT1XP80297 61 aa5.82□□□□□ -1.48
SYNRG-223ENST00000616179 RNF213Q63HN8 5207 aa5.8□□□□□ -1.48
SYNRG-223ENST00000616179 LCE3CQ5T5A8 94 aa5.8□□□□□ -1.48
SYNRG-223ENST00000616179 LCE2CQ5TA81 110 aa5.77□□□□□ -1.49
SYNRG-223ENST00000616179 HERC1Q15751 4861 aa5.76□□□□□ -1.49
SYNRG-223ENST00000616179 CRCT1Q9UGL9 99 aa5.73□□□□□ -1.49
SYNRG-223ENST00000616179 MT1BP07438 61 aa5.72□□□□□ -1.49
SYNRG-223ENST00000616179 UBR4Q5T4S7 5183 aa5.72□□□□□ -1.49
SYNRG-223ENST00000616179 KRTAP19-8Q3LI54 63 aa5.66□□□□□ -1.5
SYNRG-223ENST00000616179 KRTAP9-8Q9BYQ0 159 aa5.63□□□□□ -1.51
SYNRG-223ENST00000616179 BIRC6Q9NR09 4857 aa5.6□□□□□ -1.51
SYNRG-223ENST00000616179 KRTAP4-7Q9BYR0 210 aa5.59□□□□□ -1.51
SYNRG-223ENST00000616179 KRTAP4-8A0A0G2JLE6 195 aa5.59□□□□□ -1.51
SYNRG-223ENST00000616179 KRTAP4-8Q9BYQ9 185 aa5.59□□□□□ -1.51
SYNRG-223ENST00000616179 KMT2DO14686 5537 aa5.55□□□□□ -1.52
SYNRG-223ENST00000616179 KRTAP9-6A8MVA2 160 aa5.43□□□□□ -1.54
SYNRG-223ENST00000616179 USH2AO75445 5202 aa5.4□□□□□ -1.54
SYNRG-223ENST00000616179 LCE2DQ5TA82 110 aaPredicted RBP5.38□□□□□ -1.55
SYNRG-223ENST00000616179 KRTAP12-4P60329 112 aa5.36□□□□□ -1.55
SYNRG-223ENST00000616179 KRTAP9-3Q9BYQ3 159 aa5.36□□□□□ -1.55
SYNRG-223ENST00000616179 SYNE1Q8NF91 8797 aaKnown RBP5.3□□□□□ -1.56
SYNRG-223ENST00000616179 OBSCNQ5VST9 7968 aa5.28□□□□□ -1.56
SYNRG-223ENST00000616179 FSIP2Q5CZC0 6907 aa5.28□□□□□ -1.56
SYNRG-223ENST00000616179 KRTAP2-3P0C7H8 128 aa5.24□□□□□ -1.57
SYNRG-223ENST00000616179 KRTAP2-4Q9BYR9 128 aa5.24□□□□□ -1.57
SYNRG-223ENST00000616179 KRTAP2-1Q9BYU5 128 aa5.24□□□□□ -1.57
SYNRG-223ENST00000616179 MT1GP13640 62 aa5.2□□□□□ -1.58
SYNRG-223ENST00000616179 LCE2BO14633 110 aa5.19□□□□□ -1.58
SYNRG-223ENST00000616179 LOC100996750A0A140TA64 210 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms