RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 NISCHQ9Y2I1 1504 aa27.17■■□□□ 1.94
SYNRG-223ENST00000616179 SUPT5HO00267 1087 aaKnown RBP26.2■■□□□ 1.78
SYNRG-223ENST00000616179 PCGF6Q9BYE7 350 aa26.01■■□□□ 1.75
SYNRG-223ENST00000616179 SHROOM4Q9ULL8 1493 aa25.95■■□□□ 1.75
SYNRG-223ENST00000616179 HRCP23327 699 aa25.88■■□□□ 1.73
SYNRG-223ENST00000616179 PPARGC1BQ86YN6 1023 aaKnown RBP25.79■■□□□ 1.72
SYNRG-223ENST00000616179 PELP1Q8IZL8 1130 aaKnown RBP25.44■■□□□ 1.66
SYNRG-223ENST00000616179 DCAF8L2P0C7V8 631 aa25.25■■□□□ 1.63
SYNRG-223ENST00000616179 EHMT2Q96KQ7 1210 aa24.92■■□□□ 1.58
SYNRG-223ENST00000616179 CHIC1Q5VXU3 224 aa24.85■■□□□ 1.57
SYNRG-223ENST00000616179 LOC105371045A0A1W2PR82 267 aa24.81■■□□□ 1.56
SYNRG-223ENST00000616179 TRIM26Q12899 539 aaPredicted RBP24.63■■□□□ 1.53
SYNRG-223ENST00000616179 SCAF1Q9H7N4 1312 aaKnown RBP24.6■■□□□ 1.53
SYNRG-223ENST00000616179 ZEB1P37275 1124 aaPredicted RBP24.57■■□□□ 1.52
SYNRG-223ENST00000616179 MYT1Q01538 1121 aa24.53■■□□□ 1.52
SYNRG-223ENST00000616179 FAM9AQ8IZU1 332 aaPredicted RBP24.51■■□□□ 1.51
SYNRG-223ENST00000616179 MYO15BQ96JP2 1530 aa24.4■■□□□ 1.5
SYNRG-223ENST00000616179 CENPBP07199 599 aaPredicted RBP24.37■■□□□ 1.49
SYNRG-223ENST00000616179 YTHDC1Q96MU7 727 aaKnown RBP24.28■■□□□ 1.48
SYNRG-223ENST00000616179 GTF3C3Q9Y5Q9 886 aa24.26■■□□□ 1.47
SYNRG-223ENST00000616179 TTBK1Q5TCY1 1321 aaPredicted RBP24.25■■□□□ 1.47
SYNRG-223ENST00000616179 CCER1Q8TC90 406 aaPredicted RBP24.22■■□□□ 1.47
SYNRG-223ENST00000616179 ACIN1Q9UKV3 1341 aaKnown RBP24.11■■□□□ 1.45
SYNRG-223ENST00000616179 NEUROD1Q13562 356 aa24.08■■□□□ 1.45
SYNRG-223ENST00000616179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.01■■□□□ 1.43
SYNRG-223ENST00000616179 TRIM41Q8WV44 630 aa23.94■■□□□ 1.42
SYNRG-223ENST00000616179 DIEXFQ68CQ4 756 aaKnown RBP23.93■■□□□ 1.42
SYNRG-223ENST00000616179 DCAF1Q9Y4B6 1507 aa23.83■■□□□ 1.41
SYNRG-223ENST00000616179 CCDC180Q9P1Z9 1646 aa23.34■■□□□ 1.33
SYNRG-223ENST00000616179 ZNF316A6NFI3 1004 aaPredicted RBP23.24■■□□□ 1.31
SYNRG-223ENST00000616179 HNRNPUL2Q1KMD3 747 aaKnown RBP23.18■■□□□ 1.3
SYNRG-223ENST00000616179 MIER1Q8N108 512 aa23.14■■□□□ 1.29
SYNRG-223ENST00000616179 BCANQ96GW7 911 aa23.14■■□□□ 1.29
SYNRG-223ENST00000616179 RANGAP1P46060 587 aaPredicted RBP23.11■■□□□ 1.29
SYNRG-223ENST00000616179 UBTFP17480 764 aaKnown RBP23.05■■□□□ 1.28
SYNRG-223ENST00000616179 ERICH6Q7L0X2 663 aa23.01■■□□□ 1.27
SYNRG-223ENST00000616179 APLP2Q06481 763 aa22.98■■□□□ 1.27
SYNRG-223ENST00000616179 BCL11AQ9H165 835 aa22.98■■□□□ 1.27
SYNRG-223ENST00000616179 ZCCHC6Q5VYS8 1495 aaKnown RBP22.92■■□□□ 1.26
SYNRG-223ENST00000616179 ANP32EQ9BTT0 268 aa22.86■■□□□ 1.25
SYNRG-223ENST00000616179 NEFLP07196 543 aa22.84■■□□□ 1.25
SYNRG-223ENST00000616179 SUPT16HQ9Y5B9 1047 aaKnown RBP22.7■■□□□ 1.22
SYNRG-223ENST00000616179 CSRNP3Q8WYN3 585 aa22.67■■□□□ 1.22
SYNRG-223ENST00000616179 FKBP8Q14318 412 aa22.61■■□□□ 1.21
SYNRG-223ENST00000616179 TSHZ2Q9NRE2 1034 aa22.57■■□□□ 1.2
SYNRG-223ENST00000616179 ITGAEP38570 1179 aa22.57■■□□□ 1.2
SYNRG-223ENST00000616179 CLSPNQ9HAW4 1339 aa22.38■■□□□ 1.17
SYNRG-223ENST00000616179 TRIM52Q96A61 297 aa22.3■■□□□ 1.16
SYNRG-223ENST00000616179 RBM19Q9Y4C8 960 aaKnown RBP22.24■■□□□ 1.15
SYNRG-223ENST00000616179 RSF1Q96T23 1441 aaPredicted RBP22.24■■□□□ 1.15
SYNRG-223ENST00000616179 DDX10Q13206 875 aaKnown RBP22.21■■□□□ 1.15
SYNRG-223ENST00000616179 CDK11AQ9UQ88 783 aaPredicted RBP22.21■■□□□ 1.15
SYNRG-223ENST00000616179 IRX6P78412 446 aaPredicted RBP22.2■■□□□ 1.14
SYNRG-223ENST00000616179 KCNH8Q96L42 1107 aa22.16■■□□□ 1.14
SYNRG-223ENST00000616179 NBR1Q14596 966 aa22.14■■□□□ 1.13
SYNRG-223ENST00000616179 CEP162Q5TB80 1403 aa22.13■■□□□ 1.13
SYNRG-223ENST00000616179 HIRIP3Q9BW71 556 aaPredicted RBP22.11■■□□□ 1.13
SYNRG-223ENST00000616179 ATP1B4Q9UN42 357 aaPredicted RBP22.09■■□□□ 1.13
SYNRG-223ENST00000616179 CNGB1Q14028 1251 aaPredicted RBP22.07■■□□□ 1.12
SYNRG-223ENST00000616179 RTL5Q5HYW3 569 aaPredicted RBP22.04■■□□□ 1.12
SYNRG-223ENST00000616179 ANP32CO43423 234 aa22.03■■□□□ 1.12
SYNRG-223ENST00000616179 RB1CC1Q8TDY2 1594 aa22.01■■□□□ 1.11
SYNRG-223ENST00000616179 SCRIBQ14160 1630 aa21.93■■□□□ 1.1
SYNRG-223ENST00000616179 DEKP35659 375 aaKnown RBP21.91■■□□□ 1.1
SYNRG-223ENST00000616179 HNRNPUQ00839 825 aaKnown RBP eCLIP21.91■■□□□ 1.1
SYNRG-223ENST00000616179 PRKCSHP14314 528 aaPredicted RBP21.88■■□□□ 1.09
SYNRG-223ENST00000616179 RTN4Q9NQC3 1192 aaKnown RBP21.88■■□□□ 1.09
SYNRG-223ENST00000616179 FAM50AQ14320 339 aaKnown RBP21.81■■□□□ 1.08
SYNRG-223ENST00000616179 TNIKQ9UKE5 1360 aa21.79■■□□□ 1.08
SYNRG-223ENST00000616179 EIF5BO60841 1220 aaKnown RBP21.78■■□□□ 1.08
SYNRG-223ENST00000616179 SOGA1O94964 1423 aa21.78■■□□□ 1.08
SYNRG-223ENST00000616179 NPM2Q86SE8 214 aaKnown RBP21.73■■□□□ 1.07
SYNRG-223ENST00000616179 POLR3GLQ9BT43 218 aa21.72■■□□□ 1.07
SYNRG-223ENST00000616179 MYT1LQ9UL68 1186 aa21.7■■□□□ 1.06
SYNRG-223ENST00000616179 ABCC9O60706 1549 aa21.7■■□□□ 1.06
SYNRG-223ENST00000616179 CLIP1P30622 1438 aa21.7■■□□□ 1.06
SYNRG-223ENST00000616179 MSH5O43196 834 aa21.7■■□□□ 1.06
SYNRG-223ENST00000616179 CCDC136Q96JN2 1154 aa21.7■■□□□ 1.06
SYNRG-223ENST00000616179 SIN3AQ96ST3 1273 aa21.66■■□□□ 1.06
SYNRG-223ENST00000616179 ANP32AP39687 249 aaKnown RBP21.66■■□□□ 1.06
SYNRG-223ENST00000616179 ANO8Q9HCE9 1232 aaPredicted RBP21.66■■□□□ 1.06
SYNRG-223ENST00000616179 B4GALNT3Q6L9W6 998 aa21.65■■□□□ 1.06
SYNRG-223ENST00000616179 CECR2Q9BXF3 1484 aa21.64■■□□□ 1.06
SYNRG-223ENST00000616179 WRNQ14191 1432 aaPredicted RBP eCLIP21.64■■□□□ 1.06
SYNRG-223ENST00000616179 CCDC88BA6NC98 1476 aa21.64■■□□□ 1.06
SYNRG-223ENST00000616179 FAM9BQ8IZU0 186 aa21.64■■□□□ 1.05
SYNRG-223ENST00000616179 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.63■■□□□ 1.05
SYNRG-223ENST00000616179 SENP3-EIF4A1A0A087X0R7 540 aa21.62■■□□□ 1.05
SYNRG-223ENST00000616179 ABCC8Q09428 1581 aa21.58■■□□□ 1.05
SYNRG-223ENST00000616179 ZBTB47Q9UFB7 747 aaPredicted RBP21.58■■□□□ 1.05
SYNRG-223ENST00000616179 NOP58Q9Y2X3 529 aaKnown RBP21.57■■□□□ 1.04
SYNRG-223ENST00000616179 GOLGA3Q08378 1498 aa21.55■■□□□ 1.04
SYNRG-223ENST00000616179 DHX57Q6P158 1386 aaKnown RBP21.53■■□□□ 1.04
SYNRG-223ENST00000616179 DAXXQ9UER7 740 aaPredicted RBP21.5■■□□□ 1.03
SYNRG-223ENST00000616179 RUSC2Q8N2Y8 1516 aa21.49■■□□□ 1.03
SYNRG-223ENST00000616179 KANK4Q5T7N3 995 aaPredicted RBP21.49■■□□□ 1.03
SYNRG-223ENST00000616179 PPP4R2Q9NY27 417 aa21.45■■□□□ 1.03
SYNRG-223ENST00000616179 FANCIQ9NVI1 1328 aa21.45■■□□□ 1.02
SYNRG-223ENST00000616179 LAS1LQ9Y4W2 734 aaKnown RBP21.44■■□□□ 1.02
SYNRG-223ENST00000616179 SALL2Q9Y467 1007 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms