RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 MYO15AQ9UKN7 3530 aa0.67□□□□□ -2.3
HMGB1P24-202ENST00000615653 VPS13BQ7Z7G8 4022 aa0.67□□□□□ -2.3
HMGB1P24-202ENST00000615653 RIF1Q5UIP0 2472 aaKnown RBP0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 DNAH10Q8IVF4 4471 aa0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 NF1P21359 2839 aa0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 SONP18583 2426 aaKnown RBP0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 HECTD4Q9Y4D8 3996 aa0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 A0A096LPF7 62 aa0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 MUC5BQ9HC84 5762 aaPredicted RBP0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 CUBNO60494 3623 aa0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 KMT2AQ03164 3969 aa0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 CDH23Q9H251 3354 aa0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 CSMD2Q7Z408 3487 aa0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 DNAH6Q9C0G6 4158 aa0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 TACC2O95359 2948 aa0.65□□□□□ -2.3
HMGB1P24-202ENST00000615653 A0A096LNI7 61 aa0.65□□□□□ -2.31
HMGB1P24-202ENST00000615653 ZNF469Q96JG9 3925 aaPredicted RBP0.65□□□□□ -2.31
HMGB1P24-202ENST00000615653 SACSQ9NZJ4 4579 aa0.65□□□□□ -2.31
HMGB1P24-202ENST00000615653 PRKDCP78527 4128 aaKnown RBP0.65□□□□□ -2.31
HMGB1P24-202ENST00000615653 PKHD1L1Q86WI1 4243 aa0.65□□□□□ -2.31
HMGB1P24-202ENST00000615653 UTP20O75691 2785 aaKnown RBP0.65□□□□□ -2.31
HMGB1P24-202ENST00000615653 ANK3Q12955 4377 aaKnown RBP0.65□□□□□ -2.31
HMGB1P24-202ENST00000615653 ADGRG4Q8IZF6 3080 aa0.65□□□□□ -2.31
HMGB1P24-202ENST00000615653 BDP1A6H8Y1 2624 aa0.65□□□□□ -2.31
HMGB1P24-202ENST00000615653 DYNC2H1Q8NCM8 4307 aaKnown RBP0.65□□□□□ -2.31
HMGB1P24-202ENST00000615653 MACF1Q9UPN3 7388 aaKnown RBP0.64□□□□□ -2.31
HMGB1P24-202ENST00000615653 PIEZO1Q92508 2521 aa0.64□□□□□ -2.31
HMGB1P24-202ENST00000615653 PDZD2O15018 2839 aa0.64□□□□□ -2.31
HMGB1P24-202ENST00000615653 H3BNG1 76 aa0.64□□□□□ -2.31
HMGB1P24-202ENST00000615653 SPART-AS1P0CW21 52 aa0.64□□□□□ -2.31
HMGB1P24-202ENST00000615653 DOPEY1Q5JWR5 2465 aa0.64□□□□□ -2.31
HMGB1P24-202ENST00000615653 ATRQ13535 2644 aa0.64□□□□□ -2.31
HMGB1P24-202ENST00000615653 EYSQ5T1H1 3165 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 TEX15Q9BXT5 2789 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 PKD1P98161 4303 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 SPTAN1Q13813 2472 aaKnown RBP0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 DNAH9Q9NYC9 4486 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 DNAH17Q9UFH2 4485 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 ANKHD1Q8IWZ3 2542 aaKnown RBP0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 KRTAP2-3P0C7H8 128 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 LINC01556Q5JQF7 62 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 DEFB124Q8NES8 71 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 KRTAP2-4Q9BYR9 128 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 KRTAP2-1Q9BYU5 128 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 COL7A1Q02388 2944 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 SVEP1Q4LDE5 3571 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 LRRK2Q5S007 2527 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 TLN1Q9Y490 2541 aaKnown RBP0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 HUWE1Q7Z6Z7 4374 aaKnown RBP0.62□□□□□ -2.31
HMGB1P24-202ENST00000615653 HECTD1Q9ULT8 2610 aa0.62□□□□□ -2.31
HMGB1P24-202ENST00000615653 USP9XQ93008 2570 aaPredicted RBP0.62□□□□□ -2.31
HMGB1P24-202ENST00000615653 FLGP20930 4061 aaPredicted RBP0.62□□□□□ -2.31
HMGB1P24-202ENST00000615653 ITPR3Q14573 2671 aa0.61□□□□□ -2.31
HMGB1P24-202ENST00000615653 SETXQ7Z333 2677 aaKnown RBP0.61□□□□□ -2.31
HMGB1P24-202ENST00000615653 CHD8Q9HCK8 2581 aa0.61□□□□□ -2.31
HMGB1P24-202ENST00000615653 CENPEQ02224 2701 aa0.61□□□□□ -2.31
HMGB1P24-202ENST00000615653 APOBP04114 4563 aaKnown RBP0.61□□□□□ -2.31
HMGB1P24-202ENST00000615653 KRTAP19-3Q7Z4W3 81 aa0.61□□□□□ -2.31
HMGB1P24-202ENST00000615653 USP9YO00507 2555 aaPredicted RBP0.6□□□□□ -2.31
HMGB1P24-202ENST00000615653 EPG5Q9HCE0 2579 aa0.6□□□□□ -2.31
HMGB1P24-202ENST00000615653 DNAH5Q8TE73 4624 aa0.6□□□□□ -2.31
HMGB1P24-202ENST00000615653 CFAP46Q8IYW2 2715 aa0.6□□□□□ -2.31
HMGB1P24-202ENST00000615653 FAT3Q8TDW7 4589 aa0.6□□□□□ -2.31
HMGB1P24-202ENST00000615653 TLN2Q9Y4G6 2542 aa0.6□□□□□ -2.31
HMGB1P24-202ENST00000615653 TENM3Q9P273 2699 aa0.6□□□□□ -2.31
HMGB1P24-202ENST00000615653 ACANP16112 2415 aa0.6□□□□□ -2.31
HMGB1P24-202ENST00000615653 FAT2Q9NYQ8 4349 aa0.6□□□□□ -2.31
HMGB1P24-202ENST00000615653 HSPG2P98160 4391 aa0.6□□□□□ -2.31
HMGB1P24-202ENST00000615653 ZANQ9Y493 2812 aa0.6□□□□□ -2.31
HMGB1P24-202ENST00000615653 FBN2P35556 2912 aa0.59□□□□□ -2.31
HMGB1P24-202ENST00000615653 TGP01266 2768 aa0.59□□□□□ -2.32
HMGB1P24-202ENST00000615653 NIPBLQ6KC79 2804 aaeCLIP0.59□□□□□ -2.32
HMGB1P24-202ENST00000615653 MXRA5Q9NR99 2828 aa0.59□□□□□ -2.32
HMGB1P24-202ENST00000615653 MTORP42345 2549 aa0.59□□□□□ -2.32
HMGB1P24-202ENST00000615653 FLNCQ14315 2725 aa0.58□□□□□ -2.32
HMGB1P24-202ENST00000615653 USP24Q9UPU5 2620 aa0.58□□□□□ -2.32
HMGB1P24-202ENST00000615653 NBEAL1Q6ZS30 2694 aa0.58□□□□□ -2.32
HMGB1P24-202ENST00000615653 HRNRQ86YZ3 2850 aaPredicted RBP0.58□□□□□ -2.32
HMGB1P24-202ENST00000615653 PLECQ15149 4684 aaKnown RBP0.58□□□□□ -2.32
HMGB1P24-202ENST00000615653 DEFB4AO15263 64 aa0.58□□□□□ -2.32
HMGB1P24-202ENST00000615653 PRM1P04553 51 aa0.58□□□□□ -2.32
HMGB1P24-202ENST00000615653 HTN3P15516 51 aa0.58□□□□□ -2.32
HMGB1P24-202ENST00000615653 NBEAL2Q6ZNJ1 2754 aa0.58□□□□□ -2.32
HMGB1P24-202ENST00000615653 TEP1Q99973 2627 aaKnown RBP0.58□□□□□ -2.32
HMGB1P24-202ENST00000615653 ZFYVE26Q68DK2 2539 aa0.58□□□□□ -2.32
HMGB1P24-202ENST00000615653 NOTCH1P46531 2555 aa0.57□□□□□ -2.32
HMGB1P24-202ENST00000615653 PKD1L1Q8TDX9 2849 aa0.57□□□□□ -2.32
HMGB1P24-202ENST00000615653 UNC79Q9P2D8 2635 aa0.57□□□□□ -2.32
HMGB1P24-202ENST00000615653 CACNA1AO00555 2505 aa0.57□□□□□ -2.32
HMGB1P24-202ENST00000615653 ANKRD11Q6UB99 2663 aaPredicted RBP0.57□□□□□ -2.32
HMGB1P24-202ENST00000615653 MYO9AB2RTY4 2548 aa0.57□□□□□ -2.32
HMGB1P24-202ENST00000615653 MYO18BQ8IUG5 2567 aa0.56□□□□□ -2.32
HMGB1P24-202ENST00000615653 PKHD1P08F94 4074 aa0.56□□□□□ -2.32
HMGB1P24-202ENST00000615653 ITPR2Q14571 2701 aa0.56□□□□□ -2.32
HMGB1P24-202ENST00000615653 RPS29P62273 56 aaKnown RBP0.56□□□□□ -2.32
HMGB1P24-202ENST00000615653 DSTQ03001 7570 aaKnown RBP0.56□□□□□ -2.32
HMGB1P24-202ENST00000615653 LRP1Q07954 4544 aaKnown RBP0.56□□□□□ -2.32
HMGB1P24-202ENST00000615653 TNXBP22105 4242 aa0.55□□□□□ -2.32
HMGB1P24-202ENST00000615653 GCN1Q92616 2671 aaKnown RBP0.55□□□□□ -2.32
HMGB1P24-202ENST00000615653 STAB2Q8WWQ8 2551 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms