RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 MYO15AQ9UKN7 3530 aa0.67□□□□□ -2.3
HMGB1P24-202ENST00000615653 VPS13BQ7Z7G8 4022 aa0.67□□□□□ -2.3
HMGB1P24-202ENST00000615653 RIF1Q5UIP0 2472 aaKnown RBP0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 DNAH10Q8IVF4 4471 aa0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 NF1P21359 2839 aa0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 SONP18583 2426 aaKnown RBP0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 HECTD4Q9Y4D8 3996 aa0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 A0A096LPF7 62 aa0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 MUC5BQ9HC84 5762 aaPredicted RBP0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 CUBNO60494 3623 aa0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 KMT2AQ03164 3969 aa0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 CDH23Q9H251 3354 aa0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 CSMD2Q7Z408 3487 aa0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 DNAH6Q9C0G6 4158 aa0.66□□□□□ -2.3
HMGB1P24-202ENST00000615653 TACC2O95359 2948 aa0.65□□□□□ -2.3
HMGB1P24-202ENST00000615653 A0A096LNI7 61 aa0.65□□□□□ -2.31
HMGB1P24-202ENST00000615653 ZNF469Q96JG9 3925 aaPredicted RBP0.65□□□□□ -2.31
HMGB1P24-202ENST00000615653 SACSQ9NZJ4 4579 aa0.65□□□□□ -2.31
HMGB1P24-202ENST00000615653 PRKDCP78527 4128 aaKnown RBP0.65□□□□□ -2.31
HMGB1P24-202ENST00000615653 PKHD1L1Q86WI1 4243 aa0.65□□□□□ -2.31
HMGB1P24-202ENST00000615653 UTP20O75691 2785 aaKnown RBP0.65□□□□□ -2.31
HMGB1P24-202ENST00000615653 ANK3Q12955 4377 aaKnown RBP0.65□□□□□ -2.31
HMGB1P24-202ENST00000615653 ADGRG4Q8IZF6 3080 aa0.65□□□□□ -2.31
HMGB1P24-202ENST00000615653 BDP1A6H8Y1 2624 aa0.65□□□□□ -2.31
HMGB1P24-202ENST00000615653 DYNC2H1Q8NCM8 4307 aaKnown RBP0.65□□□□□ -2.31
HMGB1P24-202ENST00000615653 MACF1Q9UPN3 7388 aaKnown RBP0.64□□□□□ -2.31
HMGB1P24-202ENST00000615653 PIEZO1Q92508 2521 aa0.64□□□□□ -2.31
HMGB1P24-202ENST00000615653 PDZD2O15018 2839 aa0.64□□□□□ -2.31
HMGB1P24-202ENST00000615653 H3BNG1 76 aa0.64□□□□□ -2.31
HMGB1P24-202ENST00000615653 SPART-AS1P0CW21 52 aa0.64□□□□□ -2.31
HMGB1P24-202ENST00000615653 DOPEY1Q5JWR5 2465 aa0.64□□□□□ -2.31
HMGB1P24-202ENST00000615653 ATRQ13535 2644 aa0.64□□□□□ -2.31
HMGB1P24-202ENST00000615653 EYSQ5T1H1 3165 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 TEX15Q9BXT5 2789 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 PKD1P98161 4303 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 SPTAN1Q13813 2472 aaKnown RBP0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 DNAH9Q9NYC9 4486 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 DNAH17Q9UFH2 4485 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 ANKHD1Q8IWZ3 2542 aaKnown RBP0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 KRTAP2-3P0C7H8 128 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 LINC01556Q5JQF7 62 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 DEFB124Q8NES8 71 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 KRTAP2-4Q9BYR9 128 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 KRTAP2-1Q9BYU5 128 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 COL7A1Q02388 2944 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 SVEP1Q4LDE5 3571 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 LRRK2Q5S007 2527 aa0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 TLN1Q9Y490 2541 aaKnown RBP0.63□□□□□ -2.31
HMGB1P24-202ENST00000615653 HUWE1Q7Z6Z7 4374 aaKnown RBP0.62□□□□□ -2.31
HMGB1P24-202ENST00000615653 HECTD1Q9ULT8 2610 aa0.62□□□□□ -2.31
HMGB1P24-202ENST00000615653 USP9XQ93008 2570 aaPredicted RBP0.62□□□□□ -2.31
HMGB1P24-202ENST00000615653 FLGP20930 4061 aaPredicted RBP0.62□□□□□ -2.31
HMGB1P24-202ENST00000615653 ITPR3Q14573 2671 aa0.61□□□□□ -2.31
HMGB1P24-202ENST00000615653 SETXQ7Z333 2677 aaKnown RBP0.61□□□□□ -2.31
HMGB1P24-202ENST00000615653 CHD8Q9HCK8 2581 aa0.61□□□□□ -2.31
HMGB1P24-202ENST00000615653 CENPEQ02224 2701 aa0.61□□□□□ -2.31
HMGB1P24-202ENST00000615653 APOBP04114 4563 aaKnown RBP0.61□□□□□ -2.31
HMGB1P24-202ENST00000615653 KRTAP19-3Q7Z4W3 81 aa0.61□□□□□ -2.31
HMGB1P24-202ENST00000615653 USP9YO00507 2555 aaPredicted RBP0.6□□□□□ -2.31
HMGB1P24-202ENST00000615653 EPG5Q9HCE0 2579 aa0.6□□□□□ -2.31
HMGB1P24-202ENST00000615653 DNAH5Q8TE73 4624 aa0.6□□□□□ -2.31
HMGB1P24-202ENST00000615653 CFAP46Q8IYW2 2715 aa0.6□□□□□ -2.31
HMGB1P24-202ENST00000615653 FAT3Q8TDW7 4589 aa0.6□□□□□ -2.31
HMGB1P24-202ENST00000615653 TLN2Q9Y4G6 2542 aa0.6□□□□□ -2.31
HMGB1P24-202ENST00000615653 TENM3Q9P273 2699 aa0.6□□□□□ -2.31
HMGB1P24-202ENST00000615653 ACANP16112 2415 aa0.6□□□□□ -2.31
HMGB1P24-202ENST00000615653 FAT2Q9NYQ8 4349 aa0.6□□□□□ -2.31
HMGB1P24-202ENST00000615653 HSPG2P98160 4391 aa0.6□□□□□ -2.31
HMGB1P24-202ENST00000615653 ZANQ9Y493 2812 aa0.6□□□□□ -2.31
HMGB1P24-202ENST00000615653 FBN2P35556 2912 aa0.59□□□□□ -2.31
HMGB1P24-202ENST00000615653 TGP01266 2768 aa0.59□□□□□ -2.32
HMGB1P24-202ENST00000615653 NIPBLQ6KC79 2804 aaeCLIP0.59□□□□□ -2.32
HMGB1P24-202ENST00000615653 MXRA5Q9NR99 2828 aa0.59□□□□□ -2.32
HMGB1P24-202ENST00000615653 MTORP42345 2549 aa0.59□□□□□ -2.32
HMGB1P24-202ENST00000615653 FLNCQ14315 2725 aa0.58□□□□□ -2.32
HMGB1P24-202ENST00000615653 USP24Q9UPU5 2620 aa0.58□□□□□ -2.32
HMGB1P24-202ENST00000615653 NBEAL1Q6ZS30 2694 aa0.58□□□□□ -2.32
HMGB1P24-202ENST00000615653 HRNRQ86YZ3 2850 aaPredicted RBP0.58□□□□□ -2.32
HMGB1P24-202ENST00000615653 PLECQ15149 4684 aaKnown RBP0.58□□□□□ -2.32
HMGB1P24-202ENST00000615653 DEFB4AO15263 64 aa0.58□□□□□ -2.32
HMGB1P24-202ENST00000615653 PRM1P04553 51 aa0.58□□□□□ -2.32
HMGB1P24-202ENST00000615653 HTN3P15516 51 aa0.58□□□□□ -2.32
HMGB1P24-202ENST00000615653 NBEAL2Q6ZNJ1 2754 aa0.58□□□□□ -2.32
HMGB1P24-202ENST00000615653 TEP1Q99973 2627 aaKnown RBP0.58□□□□□ -2.32
HMGB1P24-202ENST00000615653 ZFYVE26Q68DK2 2539 aa0.58□□□□□ -2.32
HMGB1P24-202ENST00000615653 NOTCH1P46531 2555 aa0.57□□□□□ -2.32
HMGB1P24-202ENST00000615653 PKD1L1Q8TDX9 2849 aa0.57□□□□□ -2.32
HMGB1P24-202ENST00000615653 UNC79Q9P2D8 2635 aa0.57□□□□□ -2.32
HMGB1P24-202ENST00000615653 CACNA1AO00555 2505 aa0.57□□□□□ -2.32
HMGB1P24-202ENST00000615653 ANKRD11Q6UB99 2663 aaPredicted RBP0.57□□□□□ -2.32
HMGB1P24-202ENST00000615653 MYO9AB2RTY4 2548 aa0.57□□□□□ -2.32
HMGB1P24-202ENST00000615653 MYO18BQ8IUG5 2567 aa0.56□□□□□ -2.32
HMGB1P24-202ENST00000615653 PKHD1P08F94 4074 aa0.56□□□□□ -2.32
HMGB1P24-202ENST00000615653 ITPR2Q14571 2701 aa0.56□□□□□ -2.32
HMGB1P24-202ENST00000615653 RPS29P62273 56 aaKnown RBP0.56□□□□□ -2.32
HMGB1P24-202ENST00000615653 DSTQ03001 7570 aaKnown RBP0.56□□□□□ -2.32
HMGB1P24-202ENST00000615653 LRP1Q07954 4544 aaKnown RBP0.56□□□□□ -2.32
HMGB1P24-202ENST00000615653 TNXBP22105 4242 aa0.55□□□□□ -2.32
HMGB1P24-202ENST00000615653 GCN1Q92616 2671 aaKnown RBP0.55□□□□□ -2.32
HMGB1P24-202ENST00000615653 STAB2Q8WWQ8 2551 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms