RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 AEBP2Q6ZN18 517 aaPredicted RBP23.22■■□□□ 1.31
HMGB1P24-202ENST00000615653 CHIC1Q5VXU3 224 aa21.68■■□□□ 1.06
HMGB1P24-202ENST00000615653 SENP3Q9H4L4 574 aaPredicted RBP19.9■□□□□ 0.78
HMGB1P24-202ENST00000615653 PHF23Q9BUL5 403 aaPredicted RBP19.56■□□□□ 0.72
HMGB1P24-202ENST00000615653 FOXD1Q16676 465 aa18.63■□□□□ 0.57
HMGB1P24-202ENST00000615653 POTEDQ86YR6 584 aa18.38■□□□□ 0.53
HMGB1P24-202ENST00000615653 MSH5O43196 834 aa17.69■□□□□ 0.42
HMGB1P24-202ENST00000615653 PIAS4Q8N2W9 510 aaPredicted RBP17.22■□□□□ 0.35
HMGB1P24-202ENST00000615653 PPP6R1Q9UPN7 881 aa16.92■□□□□ 0.3
HMGB1P24-202ENST00000615653 ADRA2BP18089 450 aa16.8■□□□□ 0.28
HMGB1P24-202ENST00000615653 PLPPR3Q6T4P5 718 aa16.8■□□□□ 0.28
HMGB1P24-202ENST00000615653 DMRT2Q9Y5R5 561 aa15.69■□□□□ 0.1
HMGB1P24-202ENST00000615653 MAPK8IP2Q13387 824 aaPredicted RBP15.63■□□□□ 0.09
HMGB1P24-202ENST00000615653 CACNB1Q02641 598 aaPredicted RBP15.56■□□□□ 0.08
HMGB1P24-202ENST00000615653 SCAF1Q9H7N4 1312 aaKnown RBP15.39■□□□□ 0.05
HMGB1P24-202ENST00000615653 RNF39Q9H2S5 420 aa15.04■□□□□ -0
HMGB1P24-202ENST00000615653 DCAF8L1A6NGE4 600 aa14.99□□□□□ -0.01
HMGB1P24-202ENST00000615653 HOXD11P31277 338 aaPredicted RBP14.88□□□□□ -0.03
HMGB1P24-202ENST00000615653 C1QBPQ07021 282 aaKnown RBP14.79□□□□□ -0.04
HMGB1P24-202ENST00000615653 PPP4R3CPQ6ZMV5 832 aa14.64□□□□□ -0.07
HMGB1P24-202ENST00000615653 RNF216Q9NWF9 866 aaPredicted RBP14.57□□□□□ -0.08
HMGB1P24-202ENST00000615653 CNKSR2Q8WXI2 1034 aa14.53□□□□□ -0.08
HMGB1P24-202ENST00000615653 DNAJC5BQ9UF47 199 aa14.53□□□□□ -0.08
HMGB1P24-202ENST00000615653 POTEHQ6S545 545 aa14.27□□□□□ -0.13
HMGB1P24-202ENST00000615653 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.11□□□□□ -0.15
HMGB1P24-202ENST00000615653 NCBP3Q53F19 620 aaKnown RBP13.87□□□□□ -0.19
HMGB1P24-202ENST00000615653 DSG3P32926 999 aa13.86□□□□□ -0.19
HMGB1P24-202ENST00000615653 U3KPZ7 1027 aaPredicted RBP13.77□□□□□ -0.21
HMGB1P24-202ENST00000615653 SPINK5Q9NQ38 1064 aaPredicted RBP13.75□□□□□ -0.21
HMGB1P24-202ENST00000615653 CAPN15O75808 1086 aa13.74□□□□□ -0.21
HMGB1P24-202ENST00000615653 NPM3O75607 178 aaKnown RBP13.67□□□□□ -0.22
HMGB1P24-202ENST00000615653 TRHP20396 242 aaPredicted RBP13.36□□□□□ -0.27
HMGB1P24-202ENST00000615653 ABCB7O75027 752 aa13.35□□□□□ -0.27
HMGB1P24-202ENST00000615653 ZNF219Q9P2Y4 722 aaPredicted RBP13.34□□□□□ -0.27
HMGB1P24-202ENST00000615653 APLP2Q06481 763 aa13.31□□□□□ -0.28
HMGB1P24-202ENST00000615653 SLC4A2P04920 1241 aa13.25□□□□□ -0.29
HMGB1P24-202ENST00000615653 RBM42Q9BTD8 480 aaKnown RBP13.24□□□□□ -0.29
HMGB1P24-202ENST00000615653 CHRDL2Q6WN34 429 aa13.2□□□□□ -0.3
HMGB1P24-202ENST00000615653 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.15□□□□□ -0.3
HMGB1P24-202ENST00000615653 HNRNPUL2Q1KMD3 747 aaKnown RBP13.15□□□□□ -0.3
HMGB1P24-202ENST00000615653 SP7Q8TDD2 431 aaPredicted RBP13.07□□□□□ -0.32
HMGB1P24-202ENST00000615653 SAMD1Q6SPF0 538 aaPredicted RBP13.04□□□□□ -0.32
HMGB1P24-202ENST00000615653 POLA2Q14181 598 aa12.87□□□□□ -0.35
HMGB1P24-202ENST00000615653 KCNA4P22459 653 aa12.82□□□□□ -0.36
HMGB1P24-202ENST00000615653 AKT1S1Q96B36 256 aa12.81□□□□□ -0.36
HMGB1P24-202ENST00000615653 PIP4P2Q8N4L2 257 aa12.75□□□□□ -0.37
HMGB1P24-202ENST00000615653 HAX1O00165 279 aa12.67□□□□□ -0.38
HMGB1P24-202ENST00000615653 MYCNP04198 464 aaPredicted RBP12.67□□□□□ -0.38
HMGB1P24-202ENST00000615653 REM2Q8IYK8 340 aaPredicted RBP12.67□□□□□ -0.38
HMGB1P24-202ENST00000615653 FXR2P51116 673 aaKnown RBP eCLIP12.59□□□□□ -0.39
HMGB1P24-202ENST00000615653 ZBTB12Q9Y330 459 aaPredicted RBP12.57□□□□□ -0.4
HMGB1P24-202ENST00000615653 PITPNM1O00562 1244 aa12.53□□□□□ -0.4
HMGB1P24-202ENST00000615653 EVX2Q03828 476 aa12.49□□□□□ -0.41
HMGB1P24-202ENST00000615653 OSCARQ8IYS5 282 aa12.47□□□□□ -0.41
HMGB1P24-202ENST00000615653 ATF5Q9Y2D1 282 aaPredicted RBP12.41□□□□□ -0.42
HMGB1P24-202ENST00000615653 LHX8Q68G74 356 aa12.24□□□□□ -0.45
HMGB1P24-202ENST00000615653 C19orf67A6NJJ6 358 aa12.21□□□□□ -0.45
HMGB1P24-202ENST00000615653 PRKAR2AP13861 404 aaKnown RBP12.19□□□□□ -0.46
HMGB1P24-202ENST00000615653 GABBR2O75899 941 aa12.18□□□□□ -0.46
HMGB1P24-202ENST00000615653 FOXD4L1Q9NU39 408 aa12.18□□□□□ -0.46
HMGB1P24-202ENST00000615653 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
HMGB1P24-202ENST00000615653 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
HMGB1P24-202ENST00000615653 SPDYE2Q495Y8 402 aa12.15□□□□□ -0.46
HMGB1P24-202ENST00000615653 SPDYE1Q8NFV5 336 aaPredicted RBP12.08□□□□□ -0.48
HMGB1P24-202ENST00000615653 CLEC11AQ9Y240 323 aa12.05□□□□□ -0.48
HMGB1P24-202ENST00000615653 FBLN2P98095 1184 aa11.96□□□□□ -0.49
HMGB1P24-202ENST00000615653 SLC4A1APQ9BWU0 796 aaKnown RBP11.96□□□□□ -0.49
HMGB1P24-202ENST00000615653 PLSCR2Q9NRY7 297 aa11.96□□□□□ -0.49
HMGB1P24-202ENST00000615653 POTEIP0CG38 1075 aa11.93□□□□□ -0.5
HMGB1P24-202ENST00000615653 SSUH2Q9Y2M2 353 aa11.92□□□□□ -0.5
HMGB1P24-202ENST00000615653 CHADLQ6NUI6 762 aa11.9□□□□□ -0.5
HMGB1P24-202ENST00000615653 ATXN8OSP0DMR3 200 aa11.89□□□□□ -0.51
HMGB1P24-202ENST00000615653 ZNF692Q9BU19 519 aaPredicted RBP11.86□□□□□ -0.51
HMGB1P24-202ENST00000615653 MKRN4PQ13434 485 aaPredicted RBP11.83□□□□□ -0.52
HMGB1P24-202ENST00000615653 CLCN6P51797 869 aa11.8□□□□□ -0.52
HMGB1P24-202ENST00000615653 PRR29P0C7W0 189 aa11.79□□□□□ -0.52
HMGB1P24-202ENST00000615653 ZBTB22O15209 634 aa11.77□□□□□ -0.53
HMGB1P24-202ENST00000615653 CD44P16070 742 aaKnown RBP11.76□□□□□ -0.53
HMGB1P24-202ENST00000615653 FARP1Q9Y4F1 1045 aaPredicted RBP11.69□□□□□ -0.54
HMGB1P24-202ENST00000615653 DCBLD2Q96PD2 775 aa11.68□□□□□ -0.54
HMGB1P24-202ENST00000615653 PABPN1Q86U42 306 aaKnown RBP eCLIP11.67□□□□□ -0.54
HMGB1P24-202ENST00000615653 OTUD5Q96G74 571 aa11.6□□□□□ -0.55
HMGB1P24-202ENST00000615653 ZNF579Q8NAF0 562 aaKnown RBP11.59□□□□□ -0.55
HMGB1P24-202ENST00000615653 POTEMA6NI47 508 aa11.55□□□□□ -0.56
HMGB1P24-202ENST00000615653 POTEB2H3BUK9 544 aa11.51□□□□□ -0.57
HMGB1P24-202ENST00000615653 POTEGQ6S5H5 508 aa11.5□□□□□ -0.57
HMGB1P24-202ENST00000615653 ZRANB1Q9UGI0 708 aa11.5□□□□□ -0.57
HMGB1P24-202ENST00000615653 GALR2O43603 387 aaPredicted RBP11.47□□□□□ -0.57
HMGB1P24-202ENST00000615653 PCDH10Q9P2E7 1040 aa11.45□□□□□ -0.58
HMGB1P24-202ENST00000615653 CREBZFQ9NS37 354 aa11.36□□□□□ -0.59
HMGB1P24-202ENST00000615653 PELP1Q8IZL8 1130 aaKnown RBP11.32□□□□□ -0.6
HMGB1P24-202ENST00000615653 PHF12Q96QT6 1004 aa11.27□□□□□ -0.61
HMGB1P24-202ENST00000615653 PAK3O75914 559 aaPredicted RBP11.25□□□□□ -0.61
HMGB1P24-202ENST00000615653 LCE2DQ5TA82 110 aaPredicted RBP11.24□□□□□ -0.61
HMGB1P24-202ENST00000615653 STAG3Q9UJ98 1225 aa11.24□□□□□ -0.61
HMGB1P24-202ENST00000615653 POTEJP0CG39 1038 aa11.23□□□□□ -0.61
HMGB1P24-202ENST00000615653 METRNQ9UJH8 293 aa11.22□□□□□ -0.61
HMGB1P24-202ENST00000615653 ASTLQ6HA08 431 aaPredicted RBP11.21□□□□□ -0.61
HMGB1P24-202ENST00000615653 MAMSTRQ6ZN01 415 aa11.21□□□□□ -0.61
HMGB1P24-202ENST00000615653 C7P10643 843 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms