RNA–Protein interactions for RNA: ENST00000602398.2

SBNO1-203, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBNO1, Length 4,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-203ENST00000602398 SACSQ9NZJ4 4579 aa4.64□□□□□ -1.67
SBNO1-203ENST00000602398 APOBP04114 4563 aaKnown RBP4.63□□□□□ -1.67
SBNO1-203ENST00000602398 PRAC1Q96KF2 57 aa4.62□□□□□ -1.67
SBNO1-203ENST00000602398 CDC42SE1Q9NRR8 79 aa4.61□□□□□ -1.67
SBNO1-203ENST00000602398 DNAH2Q9P225 4427 aa4.61□□□□□ -1.67
SBNO1-203ENST00000602398 DNAH17Q9UFH2 4485 aa4.6□□□□□ -1.67
SBNO1-203ENST00000602398 KRTAP17-1Q9BYP8 105 aa4.59□□□□□ -1.67
SBNO1-203ENST00000602398 KRTAP10-10P60014 251 aa4.58□□□□□ -1.68
SBNO1-203ENST00000602398 FRAS1Q86XX4 4008 aa4.58□□□□□ -1.68
SBNO1-203ENST00000602398 HERC2O95714 4834 aa4.56□□□□□ -1.68
SBNO1-203ENST00000602398 P0C880 135 aa4.55□□□□□ -1.68
SBNO1-203ENST00000602398 DNAH3Q8TD57 4116 aa4.55□□□□□ -1.68
SBNO1-203ENST00000602398 PCLOQ9Y6V0 5065 aa4.54□□□□□ -1.68
SBNO1-203ENST00000602398 DYNC2H1Q8NCM8 4307 aaKnown RBP4.54□□□□□ -1.68
SBNO1-203ENST00000602398 RYR2Q92736 4967 aa4.53□□□□□ -1.68
SBNO1-203ENST00000602398 PLAC4Q8WY50 150 aa4.53□□□□□ -1.68
SBNO1-203ENST00000602398 EPPK1P58107 5090 aaKnown RBP4.53□□□□□ -1.68
SBNO1-203ENST00000602398 ALMS1Q8TCU4 4167 aa4.51□□□□□ -1.69
SBNO1-203ENST00000602398 LRP2P98164 4655 aa4.5□□□□□ -1.69
SBNO1-203ENST00000602398 FAT2Q9NYQ8 4349 aa4.47□□□□□ -1.69
SBNO1-203ENST00000602398 KRTAP3-1Q9BYR8 98 aa4.47□□□□□ -1.69
SBNO1-203ENST00000602398 KTN1-AS1Q86SY8 53 aa4.41□□□□□ -1.7
SBNO1-203ENST00000602398 HECTD4Q9Y4D8 3996 aa4.4□□□□□ -1.7
SBNO1-203ENST00000602398 FSIP2Q5CZC0 6907 aa4.38□□□□□ -1.71
SBNO1-203ENST00000602398 H0YAA0 97 aa4.37□□□□□ -1.71
SBNO1-203ENST00000602398 ROMO1P60602 79 aa4.36□□□□□ -1.71
SBNO1-203ENST00000602398 C10orf95Q9H7T3 257 aa4.35□□□□□ -1.71
SBNO1-203ENST00000602398 ABCA13Q86UQ4 5058 aa4.33□□□□□ -1.72
SBNO1-203ENST00000602398 RNF213Q63HN8 5207 aa4.33□□□□□ -1.72
SBNO1-203ENST00000602398 HSPG2P98160 4391 aa4.32□□□□□ -1.72
SBNO1-203ENST00000602398 KRTAP4-1Q9BYQ7 146 aa4.32□□□□□ -1.72
SBNO1-203ENST00000602398 HERC1Q15751 4861 aa4.32□□□□□ -1.72
SBNO1-203ENST00000602398 LPAP08519 4548 aa4.32□□□□□ -1.72
SBNO1-203ENST00000602398 BIRC6Q9NR09 4857 aa4.3□□□□□ -1.72
SBNO1-203ENST00000602398 MUC2Q02817 5179 aa4.27□□□□□ -1.73
SBNO1-203ENST00000602398 PKD1P98161 4303 aa4.25□□□□□ -1.73
SBNO1-203ENST00000602398 KRTAP13-4Q3LI77 160 aa4.25□□□□□ -1.73
SBNO1-203ENST00000602398 UBR4Q5T4S7 5183 aa4.23□□□□□ -1.73
SBNO1-203ENST00000602398 KRTAP12-2P59991 146 aa4.22□□□□□ -1.73
SBNO1-203ENST00000602398 TNP1P09430 55 aa4.22□□□□□ -1.73
SBNO1-203ENST00000602398 KRTAP3-3Q9BYR6 98 aa4.2□□□□□ -1.74
SBNO1-203ENST00000602398 LORP23490 312 aaPredicted RBP4.19□□□□□ -1.74
SBNO1-203ENST00000602398 A6NN06 94 aa4.19□□□□□ -1.74
SBNO1-203ENST00000602398 KRTAP10-6P60371 365 aaPredicted RBP4.18□□□□□ -1.74
SBNO1-203ENST00000602398 LUZP6Q538Z0 58 aa4.17□□□□□ -1.74
SBNO1-203ENST00000602398 FAT4Q6V0I7 4981 aa4.12□□□□□ -1.75
SBNO1-203ENST00000602398 KRTAP12-1P59990 96 aa4.12□□□□□ -1.75
SBNO1-203ENST00000602398 KRTAP25-1Q3LHN0 102 aa4.1□□□□□ -1.75
SBNO1-203ENST00000602398 KRTAP3-2Q9BYR7 98 aa4.09□□□□□ -1.75
SBNO1-203ENST00000602398 PRO2289Q9P1D8 64 aa4.06□□□□□ -1.76
SBNO1-203ENST00000602398 MT1HP80294 61 aa4.03□□□□□ -1.76
SBNO1-203ENST00000602398 PKHD1L1Q86WI1 4243 aa3.98□□□□□ -1.77
SBNO1-203ENST00000602398 MT2AP02795 61 aa3.92□□□□□ -1.78
SBNO1-203ENST00000602398 MT1FP04733 61 aa3.92□□□□□ -1.78
SBNO1-203ENST00000602398 NDUFAF8A1L188 74 aa3.91□□□□□ -1.78
SBNO1-203ENST00000602398 TNXBP22105 4242 aa3.91□□□□□ -1.78
SBNO1-203ENST00000602398 HMCN2Q8NDA2 5059 aa3.87□□□□□ -1.79
SBNO1-203ENST00000602398 CRCT1Q9UGL9 99 aa3.85□□□□□ -1.79
SBNO1-203ENST00000602398 OBSCNQ5VST9 7968 aa3.82□□□□□ -1.8
SBNO1-203ENST00000602398 PP632Q6XCG6 107 aa3.82□□□□□ -1.8
SBNO1-203ENST00000602398 KRTAP10-12P60413 245 aa3.78□□□□□ -1.8
SBNO1-203ENST00000602398 LCE2CQ5TA81 110 aa3.78□□□□□ -1.8
SBNO1-203ENST00000602398 USH2AO75445 5202 aa3.78□□□□□ -1.81
SBNO1-203ENST00000602398 LCE3AQ5TA76 89 aa3.74□□□□□ -1.81
SBNO1-203ENST00000602398 H3BS24 57 aa3.73□□□□□ -1.81
SBNO1-203ENST00000602398 KRTAP15-1Q3LI76 137 aa3.73□□□□□ -1.81
SBNO1-203ENST00000602398 KRTAP19-1Q8IUB9 90 aa3.7□□□□□ -1.82
SBNO1-203ENST00000602398 KRTAP9-8Q9BYQ0 159 aa3.69□□□□□ -1.82
SBNO1-203ENST00000602398 MUC17Q685J3 4493 aa3.68□□□□□ -1.82
SBNO1-203ENST00000602398 KRTAP19-2Q3LHN2 52 aa3.68□□□□□ -1.82
SBNO1-203ENST00000602398 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
SBNO1-203ENST00000602398 SPRR2GQ9BYE4 73 aa3.66□□□□□ -1.82
SBNO1-203ENST00000602398 KRTAP8-1Q8IUC2 63 aa3.66□□□□□ -1.82
SBNO1-203ENST00000602398 KRTAP12-3P60328 96 aa3.64□□□□□ -1.83
SBNO1-203ENST00000602398 SYNE1Q8NF91 8797 aaKnown RBP3.61□□□□□ -1.83
SBNO1-203ENST00000602398 FLGP20930 4061 aaPredicted RBP3.6□□□□□ -1.83
SBNO1-203ENST00000602398 DSTQ03001 7570 aaKnown RBP3.6□□□□□ -1.83
SBNO1-203ENST00000602398 SPRR2FQ96RM1 72 aa3.58□□□□□ -1.84
SBNO1-203ENST00000602398 KRTAP4-8A0A0G2JLE6 195 aa3.58□□□□□ -1.84
SBNO1-203ENST00000602398 KRTAP4-8Q9BYQ9 185 aa3.58□□□□□ -1.84
SBNO1-203ENST00000602398 KRTAP10-7P60409 375 aaPredicted RBP3.57□□□□□ -1.84
SBNO1-203ENST00000602398 LCE2BO14633 110 aa3.57□□□□□ -1.84
SBNO1-203ENST00000602398 MT1BP07438 61 aa3.55□□□□□ -1.84
SBNO1-203ENST00000602398 KRTAP9-3Q9BYQ3 159 aa3.55□□□□□ -1.84
SBNO1-203ENST00000602398 KMT2DO14686 5537 aa3.51□□□□□ -1.85
SBNO1-203ENST00000602398 MT1XP80297 61 aa3.49□□□□□ -1.85
SBNO1-203ENST00000602398 KRTAP19-5Q3LI72 72 aa3.48□□□□□ -1.85
SBNO1-203ENST00000602398 FCGBPQ9Y6R7 5405 aaPredicted RBP3.47□□□□□ -1.85
SBNO1-203ENST00000602398 KRTAP9-2Q9BYQ4 174 aa3.46□□□□□ -1.86
SBNO1-203ENST00000602398 KRTAP10-5P60370 271 aa3.46□□□□□ -1.86
SBNO1-203ENST00000602398 LCE2AQ5TA79 106 aaPredicted RBP3.45□□□□□ -1.86
SBNO1-203ENST00000602398 KRTAP19-8Q3LI54 63 aa3.44□□□□□ -1.86
SBNO1-203ENST00000602398 SYNE2Q8WXH0 6885 aaKnown RBP3.44□□□□□ -1.86
SBNO1-203ENST00000602398 SSPOA2VEC9 5147 aa3.36□□□□□ -1.87
SBNO1-203ENST00000602398 KRTAP4-7Q9BYR0 210 aa3.32□□□□□ -1.88
SBNO1-203ENST00000602398 SPRR2EP22531 72 aa3.31□□□□□ -1.88
SBNO1-203ENST00000602398 SPRR2BP35325 72 aa3.31□□□□□ -1.88
SBNO1-203ENST00000602398 SPRR2AP35326 72 aa3.31□□□□□ -1.88
SBNO1-203ENST00000602398 MUC12Q9UKN1 5478 aa3.29□□□□□ -1.88
SBNO1-203ENST00000602398 MACF1Q9UPN3 7388 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms