RNA–Protein interactions for RNA: ENST00000602398.2

SBNO1-203, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBNO1, Length 4,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-203ENST00000602398 DCAF8L2P0C7V8 631 aa17.26■□□□□ 0.35
SBNO1-203ENST00000602398 NISCHQ9Y2I1 1504 aa17.13■□□□□ 0.33
SBNO1-203ENST00000602398 SHROOM4Q9ULL8 1493 aa16.23■□□□□ 0.19
SBNO1-203ENST00000602398 SUPT5HO00267 1087 aaKnown RBP16.04■□□□□ 0.16
SBNO1-203ENST00000602398 EHMT2Q96KQ7 1210 aa15.62■□□□□ 0.09
SBNO1-203ENST00000602398 ABCC9O60706 1549 aa15.2■□□□□ 0.02
SBNO1-203ENST00000602398 FAM9AQ8IZU1 332 aaPredicted RBP15.15■□□□□ 0.02
SBNO1-203ENST00000602398 PABPN1Q86U42 306 aaKnown RBP eCLIP15.05■□□□□ -0
SBNO1-203ENST00000602398 RANGAP1P46060 587 aaPredicted RBP14.94□□□□□ -0.02
SBNO1-203ENST00000602398 TTBK1Q5TCY1 1321 aaPredicted RBP14.89□□□□□ -0.03
SBNO1-203ENST00000602398 TRIM41Q8WV44 630 aa14.65□□□□□ -0.06
SBNO1-203ENST00000602398 PPARGC1BQ86YN6 1023 aaKnown RBP14.54□□□□□ -0.08
SBNO1-203ENST00000602398 ATP1B4Q9UN42 357 aaPredicted RBP14.5□□□□□ -0.09
SBNO1-203ENST00000602398 UBTFP17480 764 aaKnown RBP14.42□□□□□ -0.1
SBNO1-203ENST00000602398 LOC105371045A0A1W2PR82 267 aa14.41□□□□□ -0.1
SBNO1-203ENST00000602398 PCGF6Q9BYE7 350 aa14.31□□□□□ -0.12
SBNO1-203ENST00000602398 APLP2Q06481 763 aa14.3□□□□□ -0.12
SBNO1-203ENST00000602398 CHIC1Q5VXU3 224 aa14.27□□□□□ -0.13
SBNO1-203ENST00000602398 SCRIBQ14160 1630 aa14.27□□□□□ -0.13
SBNO1-203ENST00000602398 ZCCHC6Q5VYS8 1495 aaKnown RBP14.14□□□□□ -0.15
SBNO1-203ENST00000602398 FBLN2P98095 1184 aa14.06□□□□□ -0.16
SBNO1-203ENST00000602398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.05□□□□□ -0.16
SBNO1-203ENST00000602398 HNRNPUL2Q1KMD3 747 aaKnown RBP14.05□□□□□ -0.16
SBNO1-203ENST00000602398 ITGAEP38570 1179 aa14.04□□□□□ -0.16
SBNO1-203ENST00000602398 CCDC180Q9P1Z9 1646 aa13.97□□□□□ -0.17
SBNO1-203ENST00000602398 ARID3CA6NKF2 412 aa13.96□□□□□ -0.17
SBNO1-203ENST00000602398 P3H3Q8IVL6 736 aa13.91□□□□□ -0.18
SBNO1-203ENST00000602398 CCER1Q8TC90 406 aaPredicted RBP13.82□□□□□ -0.2
SBNO1-203ENST00000602398 MYT1LQ9UL68 1186 aa13.81□□□□□ -0.2
SBNO1-203ENST00000602398 CECR2Q9BXF3 1484 aa13.79□□□□□ -0.2
SBNO1-203ENST00000602398 RB1CC1Q8TDY2 1594 aa13.77□□□□□ -0.2
SBNO1-203ENST00000602398 RSF1Q96T23 1441 aaPredicted RBP13.68□□□□□ -0.22
SBNO1-203ENST00000602398 CSRNP3Q8WYN3 585 aa13.62□□□□□ -0.23
SBNO1-203ENST00000602398 NACADO15069 1562 aa13.62□□□□□ -0.23
SBNO1-203ENST00000602398 CNGB1Q14028 1251 aaPredicted RBP13.62□□□□□ -0.23
SBNO1-203ENST00000602398 FAM50AQ14320 339 aaKnown RBP13.59□□□□□ -0.23
SBNO1-203ENST00000602398 TRIM26Q12899 539 aaPredicted RBP13.53□□□□□ -0.24
SBNO1-203ENST00000602398 POLR3GLQ9BT43 218 aa13.48□□□□□ -0.25
SBNO1-203ENST00000602398 MROH2BQ7Z745 1585 aa13.47□□□□□ -0.25
SBNO1-203ENST00000602398 BAZ1BQ9UIG0 1483 aaKnown RBP13.47□□□□□ -0.25
SBNO1-203ENST00000602398 ZNF777Q9ULD5 760 aaPredicted RBP13.46□□□□□ -0.26
SBNO1-203ENST00000602398 PLPPR3Q6T4P5 718 aa13.43□□□□□ -0.26
SBNO1-203ENST00000602398 DNAJC5BQ9UF47 199 aa13.41□□□□□ -0.26
SBNO1-203ENST00000602398 CHMP7Q8WUX9 453 aaPredicted RBP13.4□□□□□ -0.26
SBNO1-203ENST00000602398 YTHDC1Q96MU7 727 aaKnown RBP13.38□□□□□ -0.27
SBNO1-203ENST00000602398 MYO15BQ96JP2 1530 aa13.38□□□□□ -0.27
SBNO1-203ENST00000602398 NEUROD1Q13562 356 aa13.37□□□□□ -0.27
SBNO1-203ENST00000602398 TRIM52Q96A61 297 aa13.37□□□□□ -0.27
SBNO1-203ENST00000602398 SENP3Q9H4L4 574 aaPredicted RBP13.32□□□□□ -0.28
SBNO1-203ENST00000602398 ERCC6Q03468 1493 aa13.31□□□□□ -0.28
SBNO1-203ENST00000602398 DCAF1Q9Y4B6 1507 aa13.31□□□□□ -0.28
SBNO1-203ENST00000602398 ZNF326Q5BKZ1 582 aaKnown RBP13.3□□□□□ -0.28
SBNO1-203ENST00000602398 BAZ1AQ9NRL2 1556 aaPredicted RBP13.29□□□□□ -0.28
SBNO1-203ENST00000602398 KCNH8Q96L42 1107 aa13.28□□□□□ -0.28
SBNO1-203ENST00000602398 CHIC2Q9UKJ5 165 aa13.28□□□□□ -0.28
SBNO1-203ENST00000602398 WRNQ14191 1432 aaPredicted RBP eCLIP13.27□□□□□ -0.29
SBNO1-203ENST00000602398 WIZO95785 1651 aa13.27□□□□□ -0.29
SBNO1-203ENST00000602398 CCDC88BA6NC98 1476 aa13.25□□□□□ -0.29
SBNO1-203ENST00000602398 ABCC8Q09428 1581 aa13.24□□□□□ -0.29
SBNO1-203ENST00000602398 SOGA1O94964 1423 aa13.23□□□□□ -0.29
SBNO1-203ENST00000602398 TDRD9Q8NDG6 1382 aaKnown RBP13.23□□□□□ -0.29
SBNO1-203ENST00000602398 HRCP23327 699 aa13.2□□□□□ -0.3
SBNO1-203ENST00000602398 SLC4A1APQ9BWU0 796 aaKnown RBP13.18□□□□□ -0.3
SBNO1-203ENST00000602398 ZEB1P37275 1124 aaPredicted RBP13.14□□□□□ -0.31
SBNO1-203ENST00000602398 NPM1P06748 294 aaKnown RBP eCLIP13.13□□□□□ -0.31
SBNO1-203ENST00000602398 ATAD2BQ9ULI0 1458 aa13.13□□□□□ -0.31
SBNO1-203ENST00000602398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.13□□□□□ -0.313e-7■■□□□ 13.7
SBNO1-203ENST00000602398 CUX2O14529 1486 aa13.09□□□□□ -0.31
SBNO1-203ENST00000602398 CLIP1P30622 1438 aa13.07□□□□□ -0.32
SBNO1-203ENST00000602398 CHGAP10645 457 aaKnown RBP13.06□□□□□ -0.32
SBNO1-203ENST00000602398 CDK11AQ9UQ88 783 aaPredicted RBP13.05□□□□□ -0.32
SBNO1-203ENST00000602398 RRP7BPQ9NSQ0 103 aa13.05□□□□□ -0.32
SBNO1-203ENST00000602398 BCANQ96GW7 911 aa13.04□□□□□ -0.32
SBNO1-203ENST00000602398 CADPSQ9ULU8 1353 aa13.03□□□□□ -0.32
SBNO1-203ENST00000602398 KIF27Q86VH2 1401 aa13.03□□□□□ -0.32
SBNO1-203ENST00000602398 HIRIP3Q9BW71 556 aaPredicted RBP13.02□□□□□ -0.33
SBNO1-203ENST00000602398 RUSC2Q8N2Y8 1516 aa13.02□□□□□ -0.33
SBNO1-203ENST00000602398 MTUS2Q5JR59 1369 aa13.01□□□□□ -0.33
SBNO1-203ENST00000602398 CEP162Q5TB80 1403 aa13.01□□□□□ -0.33
SBNO1-203ENST00000602398 TRHP20396 242 aaPredicted RBP12.99□□□□□ -0.33
SBNO1-203ENST00000602398 CARMIL1Q5VZK9 1371 aa12.99□□□□□ -0.33
SBNO1-203ENST00000602398 NESP48681 1621 aa12.99□□□□□ -0.33
SBNO1-203ENST00000602398 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
SBNO1-203ENST00000602398 SMARCA2P51531 1590 aa12.99□□□□□ -0.33
SBNO1-203ENST00000602398 EIF4G1Q04637 1599 aaKnown RBP12.97□□□□□ -0.33
SBNO1-203ENST00000602398 PDS5BQ9NTI5 1447 aa12.95□□□□□ -0.34
SBNO1-203ENST00000602398 PLEKHD1A6NEE1 506 aa12.94□□□□□ -0.34
SBNO1-203ENST00000602398 KDM2AQ9Y2K7 1162 aa12.93□□□□□ -0.34
SBNO1-203ENST00000602398 KANK4Q5T7N3 995 aaPredicted RBP12.92□□□□□ -0.34
SBNO1-203ENST00000602398 PLEKHG5O94827 1062 aa12.92□□□□□ -0.34
SBNO1-203ENST00000602398 TOP2AP11388 1531 aaKnown RBP12.9□□□□□ -0.34
SBNO1-203ENST00000602398 GOLGA3Q08378 1498 aa12.9□□□□□ -0.34
SBNO1-203ENST00000602398 CYB5RLQ6IPT4 315 aa12.89□□□□□ -0.35
SBNO1-203ENST00000602398 ESF1Q9H501 851 aaKnown RBP12.89□□□□□ -0.35
SBNO1-203ENST00000602398 TSPY4P0CV99 314 aa12.89□□□□□ -0.35
SBNO1-203ENST00000602398 TSPY10P0CW01 314 aa12.89□□□□□ -0.35
SBNO1-203ENST00000602398 RAD54L2Q9Y4B4 1467 aa12.88□□□□□ -0.35
SBNO1-203ENST00000602398 FANCD2Q9BXW9 1451 aa12.88□□□□□ -0.35
SBNO1-203ENST00000602398 MLECQ14165 292 aa12.88□□□□□ -0.35
SBNO1-203ENST00000602398 DIEXFQ68CQ4 756 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 241.5 ms