RNA–Protein interactions for RNA: ENST00000560743.1

AC113146.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC113146.2, Length 1,961 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC113146.2-201ENST00000560743 JMJD1CQ15652 2540 aa3.23□□□□□ -1.89
AC113146.2-201ENST00000560743 NOTCH1P46531 2555 aa3.23□□□□□ -1.89
AC113146.2-201ENST00000560743 DNAH1Q9P2D7 4330 aa3.22□□□□□ -1.89
AC113146.2-201ENST00000560743 ZNF469Q96JG9 3925 aaPredicted RBP3.21□□□□□ -1.9
AC113146.2-201ENST00000560743 VPS13DQ5THJ4 4388 aa3.2□□□□□ -1.9
AC113146.2-201ENST00000560743 PKD1L1Q8TDX9 2849 aa3.2□□□□□ -1.9
AC113146.2-201ENST00000560743 NBEAL2Q6ZNJ1 2754 aa3.19□□□□□ -1.9
AC113146.2-201ENST00000560743 FRAS1Q86XX4 4008 aa3.18□□□□□ -1.9
AC113146.2-201ENST00000560743 ZANQ9Y493 2812 aa3.17□□□□□ -1.9
AC113146.2-201ENST00000560743 COL6A5A8TX70 2615 aa3.17□□□□□ -1.9
AC113146.2-201ENST00000560743 FLNAP21333 2647 aaKnown RBP3.17□□□□□ -1.9
AC113146.2-201ENST00000560743 MXRA5Q9NR99 2828 aa3.16□□□□□ -1.9
AC113146.2-201ENST00000560743 TRRAPQ9Y4A5 3859 aa3.15□□□□□ -1.9
AC113146.2-201ENST00000560743 SMR3AQ99954 134 aa3.15□□□□□ -1.91
AC113146.2-201ENST00000560743 CUBNO60494 3623 aa3.15□□□□□ -1.91
AC113146.2-201ENST00000560743 M0QZ58 72 aa3.14□□□□□ -1.91
AC113146.2-201ENST00000560743 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
AC113146.2-201ENST00000560743 ANK3Q12955 4377 aaKnown RBP3.12□□□□□ -1.91
AC113146.2-201ENST00000560743 TGP01266 2768 aa3.11□□□□□ -1.91
AC113146.2-201ENST00000560743 KRTAP10-3P60369 221 aa3.11□□□□□ -1.91
AC113146.2-201ENST00000560743 ACANP16112 2415 aa3.09□□□□□ -1.91
AC113146.2-201ENST00000560743 DMBT1Q9UGM3 2413 aaPredicted RBP3.09□□□□□ -1.92
AC113146.2-201ENST00000560743 RYR3Q15413 4870 aa3.08□□□□□ -1.92
AC113146.2-201ENST00000560743 KRTAP5-9P26371 169 aa3.08□□□□□ -1.92
AC113146.2-201ENST00000560743 KRTAP5-4Q6L8H1 288 aa3.08□□□□□ -1.92
AC113146.2-201ENST00000560743 BIRC6Q9NR09 4857 aa3.06□□□□□ -1.92
AC113146.2-201ENST00000560743 DNAH11Q96DT5 4516 aa3.06□□□□□ -1.92
AC113146.2-201ENST00000560743 MT3P25713 68 aa3.05□□□□□ -1.92
AC113146.2-201ENST00000560743 ANK2Q01484 3957 aa3.05□□□□□ -1.92
AC113146.2-201ENST00000560743 DNAH8Q96JB1 4490 aa3.05□□□□□ -1.92
AC113146.2-201ENST00000560743 COL7A1Q02388 2944 aa3.05□□□□□ -1.92
AC113146.2-201ENST00000560743 Q5VSD8 79 aa3.05□□□□□ -1.92
AC113146.2-201ENST00000560743 KRTAP13-2Q52LG2 175 aa3.04□□□□□ -1.92
AC113146.2-201ENST00000560743 KMT2CQ8NEZ4 4911 aaKnown RBP3.04□□□□□ -1.92
AC113146.2-201ENST00000560743 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
AC113146.2-201ENST00000560743 NSD1Q96L73 2696 aaPredicted RBP3.02□□□□□ -1.93
AC113146.2-201ENST00000560743 MYCBP2O75592 4640 aa3.02□□□□□ -1.93
AC113146.2-201ENST00000560743 RPS29P62273 56 aaKnown RBP3.01□□□□□ -1.93
AC113146.2-201ENST00000560743 EPPK1P58107 5090 aaKnown RBP3□□□□□ -1.93
AC113146.2-201ENST00000560743 PCLOQ9Y6V0 5065 aa3□□□□□ -1.93
AC113146.2-201ENST00000560743 A0A1B0GVY2 172 aa3□□□□□ -1.93
AC113146.2-201ENST00000560743 DNAH17Q9UFH2 4485 aa2.99□□□□□ -1.93
AC113146.2-201ENST00000560743 DNAH10Q8IVF4 4471 aa2.99□□□□□ -1.93
AC113146.2-201ENST00000560743 TENM1Q9UKZ4 2725 aa2.98□□□□□ -1.93
AC113146.2-201ENST00000560743 LYSTQ99698 3801 aa2.98□□□□□ -1.93
AC113146.2-201ENST00000560743 RYR1P21817 5038 aa2.98□□□□□ -1.93
AC113146.2-201ENST00000560743 HYDINQ4G0P3 5121 aa2.96□□□□□ -1.94
AC113146.2-201ENST00000560743 MGAM2Q2M2H8 2515 aa2.96□□□□□ -1.94
AC113146.2-201ENST00000560743 CMYA5Q8N3K9 4069 aa2.95□□□□□ -1.94
AC113146.2-201ENST00000560743 KRTAP10-5P60370 271 aa2.94□□□□□ -1.94
AC113146.2-201ENST00000560743 DNAH3Q8TD57 4116 aa2.92□□□□□ -1.94
AC113146.2-201ENST00000560743 DYNC2H1Q8NCM8 4307 aaKnown RBP2.92□□□□□ -1.94
AC113146.2-201ENST00000560743 UBR4Q5T4S7 5183 aa2.91□□□□□ -1.94
AC113146.2-201ENST00000560743 DNAH9Q9NYC9 4486 aa2.91□□□□□ -1.94
AC113146.2-201ENST00000560743 STAB2Q8WWQ8 2551 aa2.89□□□□□ -1.95
AC113146.2-201ENST00000560743 KRTAP1-4P0C5Y4 121 aa2.89□□□□□ -1.95
AC113146.2-201ENST00000560743 DNAH6Q9C0G6 4158 aa2.89□□□□□ -1.95
AC113146.2-201ENST00000560743 PRKDCP78527 4128 aaKnown RBP2.88□□□□□ -1.95
AC113146.2-201ENST00000560743 RYR2Q92736 4967 aa2.88□□□□□ -1.95
AC113146.2-201ENST00000560743 C9orf92A6NGG3 77 aa2.87□□□□□ -1.95
AC113146.2-201ENST00000560743 KRTAP9-6A8MVA2 160 aa2.87□□□□□ -1.95
AC113146.2-201ENST00000560743 DNAH7Q8WXX0 4024 aa2.85□□□□□ -1.95
AC113146.2-201ENST00000560743 KMT2AQ03164 3969 aa2.84□□□□□ -1.95
AC113146.2-201ENST00000560743 HERC2O95714 4834 aa2.84□□□□□ -1.96
AC113146.2-201ENST00000560743 TENM3Q9P273 2699 aa2.83□□□□□ -1.96
AC113146.2-201ENST00000560743 HUWE1Q7Z6Z7 4374 aaKnown RBP2.81□□□□□ -1.96
AC113146.2-201ENST00000560743 DNAH2Q9P225 4427 aa2.8□□□□□ -1.96
AC113146.2-201ENST00000560743 TNP1P09430 55 aa2.8□□□□□ -1.96
AC113146.2-201ENST00000560743 KRTAP10-10P60014 251 aa2.79□□□□□ -1.96
AC113146.2-201ENST00000560743 APOBP04114 4563 aaKnown RBP2.76□□□□□ -1.97
AC113146.2-201ENST00000560743 HECTD4Q9Y4D8 3996 aa2.74□□□□□ -1.97
AC113146.2-201ENST00000560743 KIAA1109Q2LD37 5005 aa2.72□□□□□ -1.97
AC113146.2-201ENST00000560743 SACSQ9NZJ4 4579 aa2.71□□□□□ -1.98
AC113146.2-201ENST00000560743 PLECQ15149 4684 aaKnown RBP2.7□□□□□ -1.98
AC113146.2-201ENST00000560743 STARD9Q9P2P6 4700 aa2.7□□□□□ -1.98
AC113146.2-201ENST00000560743 KRTAP4-3Q9BYR4 195 aa2.68□□□□□ -1.98
AC113146.2-201ENST00000560743 ABCA13Q86UQ4 5058 aa2.68□□□□□ -1.98
AC113146.2-201ENST00000560743 OBSCNQ5VST9 7968 aa2.68□□□□□ -1.98
AC113146.2-201ENST00000560743 HERC1Q15751 4861 aa2.67□□□□□ -1.98
AC113146.2-201ENST00000560743 KRTAP10-12P60413 245 aa2.67□□□□□ -1.98
AC113146.2-201ENST00000560743 PKD1P98161 4303 aa2.65□□□□□ -1.98
AC113146.2-201ENST00000560743 LRP1Q07954 4544 aaKnown RBP2.62□□□□□ -1.99
AC113146.2-201ENST00000560743 KRTAP10-1P60331 282 aa2.6□□□□□ -1.99
AC113146.2-201ENST00000560743 PKHD1L1Q86WI1 4243 aa2.59□□□□□ -1.99
AC113146.2-201ENST00000560743 VPS13BQ7Z7G8 4022 aa2.58□□□□□ -2
AC113146.2-201ENST00000560743 FAT2Q9NYQ8 4349 aa2.57□□□□□ -2
AC113146.2-201ENST00000560743 FAT3Q8TDW7 4589 aa2.56□□□□□ -2
AC113146.2-201ENST00000560743 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
AC113146.2-201ENST00000560743 PKHD1P08F94 4074 aa2.55□□□□□ -2
AC113146.2-201ENST00000560743 DNAH5Q8TE73 4624 aa2.55□□□□□ -2
AC113146.2-201ENST00000560743 FLGP20930 4061 aaPredicted RBP2.55□□□□□ -2
AC113146.2-201ENST00000560743 LCE1FQ5T754 118 aa2.54□□□□□ -2
AC113146.2-201ENST00000560743 LRP1BQ9NZR2 4599 aa2.53□□□□□ -2
AC113146.2-201ENST00000560743 KRTAP8-1Q8IUC2 63 aa2.52□□□□□ -2.01
AC113146.2-201ENST00000560743 TNXBP22105 4242 aa2.52□□□□□ -2.01
AC113146.2-201ENST00000560743 LCE3AQ5TA76 89 aa2.5□□□□□ -2.01
AC113146.2-201ENST00000560743 HSPG2P98160 4391 aa2.5□□□□□ -2.01
AC113146.2-201ENST00000560743 MUC2Q02817 5179 aa2.49□□□□□ -2.01
AC113146.2-201ENST00000560743 GPR98Q8WXG9 6306 aa2.48□□□□□ -2.01
AC113146.2-201ENST00000560743 KRTAP2-3P0C7H8 128 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms