RNA–Protein interactions for RNA: ENST00000560743.1

AC113146.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC113146.2, Length 1,961 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC113146.2-201ENST00000560743 AEBP2Q6ZN18 517 aaPredicted RBP20.01■□□□□ 0.79
AC113146.2-201ENST00000560743 CHIC1Q5VXU3 224 aa18.88■□□□□ 0.61
AC113146.2-201ENST00000560743 SENP3Q9H4L4 574 aaPredicted RBP17.28■□□□□ 0.36
AC113146.2-201ENST00000560743 PHF23Q9BUL5 403 aaPredicted RBP16.93■□□□□ 0.3
AC113146.2-201ENST00000560743 FOXD1Q16676 465 aa16.02■□□□□ 0.16
AC113146.2-201ENST00000560743 POTEDQ86YR6 584 aa15.25■□□□□ 0.03
AC113146.2-201ENST00000560743 MSH5O43196 834 aa15.25■□□□□ 0.03
AC113146.2-201ENST00000560743 PLPPR3Q6T4P5 718 aa14.96□□□□□ -0.01
AC113146.2-201ENST00000560743 PIAS4Q8N2W9 510 aaPredicted RBP14.94□□□□□ -0.02
AC113146.2-201ENST00000560743 PPP6R1Q9UPN7 881 aa14.69□□□□□ -0.06
AC113146.2-201ENST00000560743 ADRA2BP18089 450 aa14.65□□□□□ -0.06
AC113146.2-201ENST00000560743 DMRT2Q9Y5R5 561 aa13.63□□□□□ -0.23
AC113146.2-201ENST00000560743 SCAF1Q9H7N4 1312 aaKnown RBP13.6□□□□□ -0.23
AC113146.2-201ENST00000560743 MAPK8IP2Q13387 824 aaPredicted RBP13.52□□□□□ -0.25
AC113146.2-201ENST00000560743 CACNB1Q02641 598 aaPredicted RBP13.2□□□□□ -0.3
AC113146.2-201ENST00000560743 DCAF8L1A6NGE4 600 aa13.03□□□□□ -0.32
AC113146.2-201ENST00000560743 PPP4R3CPQ6ZMV5 832 aa13.03□□□□□ -0.32
AC113146.2-201ENST00000560743 HOXD11P31277 338 aaPredicted RBP13.01□□□□□ -0.33
AC113146.2-201ENST00000560743 CNKSR2Q8WXI2 1034 aa12.9□□□□□ -0.34
AC113146.2-201ENST00000560743 RNF39Q9H2S5 420 aa12.9□□□□□ -0.34
AC113146.2-201ENST00000560743 RNF216Q9NWF9 866 aaPredicted RBP12.85□□□□□ -0.35
AC113146.2-201ENST00000560743 C1QBPQ07021 282 aaKnown RBP12.77□□□□□ -0.37
AC113146.2-201ENST00000560743 DNAJC5BQ9UF47 199 aa12.74□□□□□ -0.37
AC113146.2-201ENST00000560743 NCBP3Q53F19 620 aaKnown RBP12.55□□□□□ -0.4
AC113146.2-201ENST00000560743 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.4□□□□□ -0.42
AC113146.2-201ENST00000560743 PELP1Q8IZL8 1130 aaKnown RBP12.34□□□□□ -0.43
AC113146.2-201ENST00000560743 MYT1Q01538 1121 aa12.29□□□□□ -0.44
AC113146.2-201ENST00000560743 NPM3O75607 178 aaKnown RBP12.23□□□□□ -0.45
AC113146.2-201ENST00000560743 U3KPZ7 1027 aaPredicted RBP12.05□□□□□ -0.48
AC113146.2-201ENST00000560743 CAPN15O75808 1086 aa11.99□□□□□ -0.49
AC113146.2-201ENST00000560743 DSG3P32926 999 aa11.97□□□□□ -0.49
AC113146.2-201ENST00000560743 TTBK1Q5TCY1 1321 aaPredicted RBP11.94□□□□□ -0.5
AC113146.2-201ENST00000560743 POTEHQ6S545 545 aa11.92□□□□□ -0.5
AC113146.2-201ENST00000560743 SPINK5Q9NQ38 1064 aaPredicted RBP11.92□□□□□ -0.5
AC113146.2-201ENST00000560743 APLP2Q06481 763 aa11.91□□□□□ -0.5
AC113146.2-201ENST00000560743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.77□□□□□ -0.53
AC113146.2-201ENST00000560743 HNRNPUL2Q1KMD3 747 aaKnown RBP11.77□□□□□ -0.53
AC113146.2-201ENST00000560743 ZNF219Q9P2Y4 722 aaPredicted RBP11.77□□□□□ -0.53
AC113146.2-201ENST00000560743 SLC4A2P04920 1241 aa11.72□□□□□ -0.53
AC113146.2-201ENST00000560743 TRHP20396 242 aaPredicted RBP11.7□□□□□ -0.54
AC113146.2-201ENST00000560743 KCNA4P22459 653 aa11.69□□□□□ -0.54
AC113146.2-201ENST00000560743 SAMD1Q6SPF0 538 aaPredicted RBP11.65□□□□□ -0.54
AC113146.2-201ENST00000560743 ABCB7O75027 752 aa11.62□□□□□ -0.55
AC113146.2-201ENST00000560743 RBM42Q9BTD8 480 aaKnown RBP11.56□□□□□ -0.56
AC113146.2-201ENST00000560743 SLC24A1O60721 1099 aa11.51□□□□□ -0.57
AC113146.2-201ENST00000560743 PRKCSHP14314 528 aaPredicted RBP11.42□□□□□ -0.58
AC113146.2-201ENST00000560743 MYCNP04198 464 aaPredicted RBP11.41□□□□□ -0.58
AC113146.2-201ENST00000560743 ERICH6Q7L0X2 663 aa11.36□□□□□ -0.59
AC113146.2-201ENST00000560743 CHRDL2Q6WN34 429 aa11.32□□□□□ -0.6
AC113146.2-201ENST00000560743 POLA2Q14181 598 aa11.31□□□□□ -0.6
AC113146.2-201ENST00000560743 ZBTB12Q9Y330 459 aaPredicted RBP11.23□□□□□ -0.61
AC113146.2-201ENST00000560743 AKT1S1Q96B36 256 aa11.19□□□□□ -0.62
AC113146.2-201ENST00000560743 FOXD4L1Q9NU39 408 aa11.11□□□□□ -0.63
AC113146.2-201ENST00000560743 SP7Q8TDD2 431 aaPredicted RBP11.06□□□□□ -0.64
AC113146.2-201ENST00000560743 SLC4A1APQ9BWU0 796 aaKnown RBP11.06□□□□□ -0.64
AC113146.2-201ENST00000560743 REM2Q8IYK8 340 aaPredicted RBP11.02□□□□□ -0.65
AC113146.2-201ENST00000560743 DAXXQ9UER7 740 aaPredicted RBP11.01□□□□□ -0.65
AC113146.2-201ENST00000560743 ATF5Q9Y2D1 282 aaPredicted RBP10.99□□□□□ -0.65
AC113146.2-201ENST00000560743 BCL11AQ9H165 835 aa10.98□□□□□ -0.65
AC113146.2-201ENST00000560743 HRCP23327 699 aa10.97□□□□□ -0.65
AC113146.2-201ENST00000560743 PIP4P2Q8N4L2 257 aa10.97□□□□□ -0.65
AC113146.2-201ENST00000560743 OSCARQ8IYS5 282 aa10.96□□□□□ -0.65
AC113146.2-201ENST00000560743 PITPNM1O00562 1244 aa10.88□□□□□ -0.67
AC113146.2-201ENST00000560743 FXR2P51116 673 aaKnown RBP eCLIP10.88□□□□□ -0.67
AC113146.2-201ENST00000560743 ATXN8OSP0DMR3 200 aa10.86□□□□□ -0.67
AC113146.2-201ENST00000560743 HAX1O00165 279 aa10.85□□□□□ -0.67
AC113146.2-201ENST00000560743 SPDYE2BA6NHP3 402 aa10.8□□□□□ -0.68
AC113146.2-201ENST00000560743 SPDYE6P0CI01 402 aa10.8□□□□□ -0.68
AC113146.2-201ENST00000560743 SPDYE2Q495Y8 402 aa10.8□□□□□ -0.68
AC113146.2-201ENST00000560743 FAM9AQ8IZU1 332 aaPredicted RBP10.79□□□□□ -0.68
AC113146.2-201ENST00000560743 FBLN2P98095 1184 aa10.79□□□□□ -0.68
AC113146.2-201ENST00000560743 ZBTB22O15209 634 aa10.7□□□□□ -0.7
AC113146.2-201ENST00000560743 SPDYE1Q8NFV5 336 aaPredicted RBP10.68□□□□□ -0.7
AC113146.2-201ENST00000560743 CENPBP07199 599 aaPredicted RBP10.63□□□□□ -0.71
AC113146.2-201ENST00000560743 PRKAR2AP13861 404 aaKnown RBP10.62□□□□□ -0.71
AC113146.2-201ENST00000560743 EIF5BO60841 1220 aaKnown RBP10.59□□□□□ -0.71
AC113146.2-201ENST00000560743 CLEC11AQ9Y240 323 aa10.59□□□□□ -0.71
AC113146.2-201ENST00000560743 EVX2Q03828 476 aa10.58□□□□□ -0.72
AC113146.2-201ENST00000560743 SSUH2Q9Y2M2 353 aa10.58□□□□□ -0.72
AC113146.2-201ENST00000560743 ZNF692Q9BU19 519 aaPredicted RBP10.56□□□□□ -0.72
AC113146.2-201ENST00000560743 C19orf67A6NJJ6 358 aa10.56□□□□□ -0.72
AC113146.2-201ENST00000560743 MKRN4PQ13434 485 aaPredicted RBP10.52□□□□□ -0.73
AC113146.2-201ENST00000560743 GABBR2O75899 941 aa10.44□□□□□ -0.74
AC113146.2-201ENST00000560743 PRR29P0C7W0 189 aa10.42□□□□□ -0.74
AC113146.2-201ENST00000560743 PPARGC1BQ86YN6 1023 aaKnown RBP10.39□□□□□ -0.75
AC113146.2-201ENST00000560743 PABPN1Q86U42 306 aaKnown RBP eCLIP10.38□□□□□ -0.75
AC113146.2-201ENST00000560743 CHADLQ6NUI6 762 aa10.37□□□□□ -0.75
AC113146.2-201ENST00000560743 ANP32EQ9BTT0 268 aa10.37□□□□□ -0.75
AC113146.2-201ENST00000560743 LHX8Q68G74 356 aa10.36□□□□□ -0.75
AC113146.2-201ENST00000560743 CLCN6P51797 869 aa10.35□□□□□ -0.75
AC113146.2-201ENST00000560743 ACIN1Q9UKV3 1341 aaKnown RBP10.34□□□□□ -0.75
AC113146.2-201ENST00000560743 UBE2Q2Q8WVN8 375 aa10.34□□□□□ -0.75
AC113146.2-201ENST00000560743 EHMT2Q96KQ7 1210 aa10.34□□□□□ -0.75
AC113146.2-201ENST00000560743 CD44P16070 742 aaKnown RBP10.28□□□□□ -0.76
AC113146.2-201ENST00000560743 FARP1Q9Y4F1 1045 aaPredicted RBP10.26□□□□□ -0.77
AC113146.2-201ENST00000560743 PLEKHG5O94827 1062 aa10.21□□□□□ -0.78
AC113146.2-201ENST00000560743 GTF3C3Q9Y5Q9 886 aa10.2□□□□□ -0.78
AC113146.2-201ENST00000560743 ZEB1P37275 1124 aaPredicted RBP10.17□□□□□ -0.78
AC113146.2-201ENST00000560743 STAG3Q9UJ98 1225 aa10.16□□□□□ -0.78
AC113146.2-201ENST00000560743 POTEIP0CG38 1075 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 289.5 ms