RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 FAT2Q9NYQ8 4349 aa1.46□□□□□ -2.18
HMGB3P26-201ENST00000560051 SPEGQ15772 3267 aa1.46□□□□□ -2.18
HMGB3P26-201ENST00000560051 TLN1Q9Y490 2541 aaKnown RBP1.45□□□□□ -2.18
HMGB3P26-201ENST00000560051 ATMQ13315 3056 aa1.45□□□□□ -2.18
HMGB3P26-201ENST00000560051 NSD1Q96L73 2696 aaPredicted RBP1.45□□□□□ -2.18
HMGB3P26-201ENST00000560051 DOPEY1Q5JWR5 2465 aa1.45□□□□□ -2.18
HMGB3P26-201ENST00000560051 ZNF469Q96JG9 3925 aaPredicted RBP1.45□□□□□ -2.18
HMGB3P26-201ENST00000560051 MYO15AQ9UKN7 3530 aa1.44□□□□□ -2.18
HMGB3P26-201ENST00000560051 MYO18BQ8IUG5 2567 aa1.44□□□□□ -2.18
HMGB3P26-201ENST00000560051 DNAH10Q8IVF4 4471 aa1.43□□□□□ -2.18
HMGB3P26-201ENST00000560051 DMDP11532 3685 aa1.43□□□□□ -2.18
HMGB3P26-201ENST00000560051 NIPBLQ6KC79 2804 aaeCLIP1.43□□□□□ -2.18
HMGB3P26-201ENST00000560051 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
HMGB3P26-201ENST00000560051 EYSQ5T1H1 3165 aa1.43□□□□□ -2.18
HMGB3P26-201ENST00000560051 PKHD1L1Q86WI1 4243 aa1.43□□□□□ -2.18
HMGB3P26-201ENST00000560051 RELNP78509 3460 aa1.43□□□□□ -2.18
HMGB3P26-201ENST00000560051 ACACBO00763 2458 aa1.43□□□□□ -2.18
HMGB3P26-201ENST00000560051 LAMA2P24043 3122 aaKnown RBP1.42□□□□□ -2.18
HMGB3P26-201ENST00000560051 SPTAN1Q13813 2472 aaKnown RBP1.42□□□□□ -2.18
HMGB3P26-201ENST00000560051 USP9XQ93008 2570 aaPredicted RBP1.42□□□□□ -2.18
HMGB3P26-201ENST00000560051 DNAH1Q9P2D7 4330 aa1.42□□□□□ -2.18
HMGB3P26-201ENST00000560051 KRTAP8-1Q8IUC2 63 aa1.42□□□□□ -2.18
HMGB3P26-201ENST00000560051 LAMA5O15230 3695 aa1.42□□□□□ -2.18
HMGB3P26-201ENST00000560051 SMG1Q96Q15 3661 aaKnown RBP1.42□□□□□ -2.18
HMGB3P26-201ENST00000560051 TLN2Q9Y4G6 2542 aa1.42□□□□□ -2.18
HMGB3P26-201ENST00000560051 CELSR3Q9NYQ7 3312 aa1.42□□□□□ -2.18
HMGB3P26-201ENST00000560051 DMXL2Q8TDJ6 3036 aa1.42□□□□□ -2.18
HMGB3P26-201ENST00000560051 VPS13AQ96RL7 3174 aa1.41□□□□□ -2.18
HMGB3P26-201ENST00000560051 STAB1Q9NY15 2570 aa1.41□□□□□ -2.18
HMGB3P26-201ENST00000560051 TEX15Q9BXT5 2789 aa1.41□□□□□ -2.18
HMGB3P26-201ENST00000560051 SMR3AQ99954 134 aa1.41□□□□□ -2.18
HMGB3P26-201ENST00000560051 COL7A1Q02388 2944 aa1.41□□□□□ -2.18
HMGB3P26-201ENST00000560051 FREM2Q5SZK8 3169 aa1.41□□□□□ -2.18
HMGB3P26-201ENST00000560051 ZZEF1O43149 2961 aa1.4□□□□□ -2.19
HMGB3P26-201ENST00000560051 TGP01266 2768 aa1.4□□□□□ -2.19
HMGB3P26-201ENST00000560051 PDZD2O15018 2839 aa1.4□□□□□ -2.19
HMGB3P26-201ENST00000560051 BOD1L1Q8NFC6 3051 aa1.39□□□□□ -2.19
HMGB3P26-201ENST00000560051 ITPR2Q14571 2701 aa1.39□□□□□ -2.19
HMGB3P26-201ENST00000560051 UNC79Q9P2D8 2635 aa1.39□□□□□ -2.19
HMGB3P26-201ENST00000560051 ANKRD11Q6UB99 2663 aaPredicted RBP1.39□□□□□ -2.19
HMGB3P26-201ENST00000560051 NOTCH1P46531 2555 aa1.39□□□□□ -2.19
HMGB3P26-201ENST00000560051 LAMA1P25391 3075 aa1.38□□□□□ -2.19
HMGB3P26-201ENST00000560051 FLGP20930 4061 aaPredicted RBP1.38□□□□□ -2.19
HMGB3P26-201ENST00000560051 DMXL1Q9Y485 3027 aa1.38□□□□□ -2.19
HMGB3P26-201ENST00000560051 HUWE1Q7Z6Z7 4374 aaKnown RBP1.38□□□□□ -2.19
HMGB3P26-201ENST00000560051 NBEAL2Q6ZNJ1 2754 aa1.37□□□□□ -2.19
HMGB3P26-201ENST00000560051 CMYA5Q8N3K9 4069 aa1.37□□□□□ -2.19
HMGB3P26-201ENST00000560051 FRAS1Q86XX4 4008 aa1.37□□□□□ -2.19
HMGB3P26-201ENST00000560051 FBN2P35556 2912 aa1.36□□□□□ -2.19
HMGB3P26-201ENST00000560051 PKD1L1Q8TDX9 2849 aa1.36□□□□□ -2.19
HMGB3P26-201ENST00000560051 KALRNO60229 2985 aa1.36□□□□□ -2.19
HMGB3P26-201ENST00000560051 PKD1P98161 4303 aa1.36□□□□□ -2.19
HMGB3P26-201ENST00000560051 HSPG2P98160 4391 aa1.36□□□□□ -2.19
HMGB3P26-201ENST00000560051 HIVEP1P15822 2718 aa1.36□□□□□ -2.19
HMGB3P26-201ENST00000560051 ZANQ9Y493 2812 aa1.35□□□□□ -2.19
HMGB3P26-201ENST00000560051 HTN3P15516 51 aa1.35□□□□□ -2.19
HMGB3P26-201ENST00000560051 DCHS1Q96JQ0 3298 aa1.35□□□□□ -2.19
HMGB3P26-201ENST00000560051 CSMD1Q96PZ7 3565 aa1.34□□□□□ -2.19
HMGB3P26-201ENST00000560051 NBEAL1Q6ZS30 2694 aa1.34□□□□□ -2.19
HMGB3P26-201ENST00000560051 TACC2O95359 2948 aa1.34□□□□□ -2.19
HMGB3P26-201ENST00000560051 DNAH9Q9NYC9 4486 aa1.34□□□□□ -2.2
HMGB3P26-201ENST00000560051 FASNP49327 2511 aaKnown RBP1.34□□□□□ -2.2
HMGB3P26-201ENST00000560051 ASPMQ8IZT6 3477 aa1.34□□□□□ -2.2
HMGB3P26-201ENST00000560051 DNAH6Q9C0G6 4158 aa1.33□□□□□ -2.2
HMGB3P26-201ENST00000560051 CFAP47Q6ZTR5 3102 aa1.33□□□□□ -2.2
HMGB3P26-201ENST00000560051 FLNBO75369 2602 aaKnown RBP1.33□□□□□ -2.2
HMGB3P26-201ENST00000560051 FLNAP21333 2647 aaKnown RBP1.33□□□□□ -2.2
HMGB3P26-201ENST00000560051 CEP295Q9C0D2 2601 aa1.33□□□□□ -2.2
HMGB3P26-201ENST00000560051 TNXBP22105 4242 aa1.32□□□□□ -2.2
HMGB3P26-201ENST00000560051 WDFY4Q6ZS81 3184 aa1.32□□□□□ -2.2
HMGB3P26-201ENST00000560051 LOC400499M0QZD8 3231 aa1.32□□□□□ -2.2
HMGB3P26-201ENST00000560051 HRNRQ86YZ3 2850 aaPredicted RBP1.32□□□□□ -2.2
HMGB3P26-201ENST00000560051 FAT3Q8TDW7 4589 aa1.32□□□□□ -2.2
HMGB3P26-201ENST00000560051 TRRAPQ9Y4A5 3859 aa1.31□□□□□ -2.2
HMGB3P26-201ENST00000560051 MUC3AQ02505 3323 aa1.31□□□□□ -2.2
HMGB3P26-201ENST00000560051 HECTD4Q9Y4D8 3996 aa1.31□□□□□ -2.2
HMGB3P26-201ENST00000560051 TEP1Q99973 2627 aaKnown RBP1.31□□□□□ -2.2
HMGB3P26-201ENST00000560051 CUBNO60494 3623 aa1.3□□□□□ -2.2
HMGB3P26-201ENST00000560051 MXRA5Q9NR99 2828 aa1.3□□□□□ -2.2
HMGB3P26-201ENST00000560051 APOBP04114 4563 aaKnown RBP1.29□□□□□ -2.2
HMGB3P26-201ENST00000560051 SVEP1Q4LDE5 3571 aa1.28□□□□□ -2.2
HMGB3P26-201ENST00000560051 STAB2Q8WWQ8 2551 aa1.28□□□□□ -2.2
HMGB3P26-201ENST00000560051 MAST4O15021 2626 aa1.28□□□□□ -2.2
HMGB3P26-201ENST00000560051 DNAH17Q9UFH2 4485 aa1.27□□□□□ -2.21
HMGB3P26-201ENST00000560051 MYO9AB2RTY4 2548 aa1.27□□□□□ -2.21
HMGB3P26-201ENST00000560051 PKHD1P08F94 4074 aa1.27□□□□□ -2.21
HMGB3P26-201ENST00000560051 CRCT1Q9UGL9 99 aa1.27□□□□□ -2.21
HMGB3P26-201ENST00000560051 PLECQ15149 4684 aaKnown RBP1.27□□□□□ -2.21
HMGB3P26-201ENST00000560051 DEFB4AO15263 64 aa1.26□□□□□ -2.21
HMGB3P26-201ENST00000560051 FBN3Q75N90 2809 aa1.26□□□□□ -2.21
HMGB3P26-201ENST00000560051 TENM3Q9P273 2699 aa1.26□□□□□ -2.21
HMGB3P26-201ENST00000560051 MGAM2Q2M2H8 2515 aa1.25□□□□□ -2.21
HMGB3P26-201ENST00000560051 VPS13CQ709C8 3753 aa1.25□□□□□ -2.21
HMGB3P26-201ENST00000560051 DNAH5Q8TE73 4624 aa1.24□□□□□ -2.21
HMGB3P26-201ENST00000560051 PRM1P04553 51 aa1.24□□□□□ -2.21
HMGB3P26-201ENST00000560051 CSMD2Q7Z408 3487 aa1.22□□□□□ -2.21
HMGB3P26-201ENST00000560051 IGSF10Q6WRI0 2623 aa1.21□□□□□ -2.22
HMGB3P26-201ENST00000560051 ADGRG4Q8IZF6 3080 aa1.21□□□□□ -2.22
HMGB3P26-201ENST00000560051 SMR3BP02814 79 aaPredicted RBP1.21□□□□□ -2.22
HMGB3P26-201ENST00000560051 LRP1Q07954 4544 aaKnown RBP1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms