RNA–Protein interactions for RNA: ENST00000554455.5

HNRNPC-211, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-211ENST00000554455 DNAH9Q9NYC9 4486 aa4.47□□□□□ -1.69
HNRNPC-211ENST00000554455 SPINK6Q6UWN8 80 aa4.45□□□□□ -1.7
HNRNPC-211ENST00000554455 KRTAP23-1A1A580 65 aa4.43□□□□□ -1.7
HNRNPC-211ENST00000554455 Q8N1X5 172 aa4.43□□□□□ -1.7
HNRNPC-211ENST00000554455 S4R3F8 94 aa4.42□□□□□ -1.7
HNRNPC-211ENST00000554455 LCE4AQ5TA78 99 aa4.4□□□□□ -1.7
HNRNPC-211ENST00000554455 LYSTQ99698 3801 aa4.4□□□□□ -1.7
HNRNPC-211ENST00000554455 INE1O15225 51 aa4.4□□□□□ -1.71
HNRNPC-211ENST00000554455 VPS13DQ5THJ4 4388 aa4.39□□□□□ -1.71
HNRNPC-211ENST00000554455 KRTAP13-2Q52LG2 175 aa4.38□□□□□ -1.71
HNRNPC-211ENST00000554455 DNAH17Q9UFH2 4485 aa4.38□□□□□ -1.71
HNRNPC-211ENST00000554455 R4GN34 69 aa4.37□□□□□ -1.71
HNRNPC-211ENST00000554455 PLECQ15149 4684 aaKnown RBP4.36□□□□□ -1.71
HNRNPC-211ENST00000554455 KRTAP10-6P60371 365 aaPredicted RBP4.35□□□□□ -1.71
HNRNPC-211ENST00000554455 KRTAP13-4Q3LI77 160 aa4.35□□□□□ -1.71
HNRNPC-211ENST00000554455 EPPK1P58107 5090 aaKnown RBP4.35□□□□□ -1.71
HNRNPC-211ENST00000554455 BIRC6Q9NR09 4857 aa4.34□□□□□ -1.72
HNRNPC-211ENST00000554455 DNAH8Q96JB1 4490 aa4.34□□□□□ -1.72
HNRNPC-211ENST00000554455 SRRM2Q9UQ35 2752 aaKnown RBP4.34□□□□□ -1.72
HNRNPC-211ENST00000554455 DNAH7Q8WXX0 4024 aa4.33□□□□□ -1.72
HNRNPC-211ENST00000554455 FRAS1Q86XX4 4008 aa4.33□□□□□ -1.72
HNRNPC-211ENST00000554455 CSMD3Q7Z407 3707 aa4.32□□□□□ -1.72
HNRNPC-211ENST00000554455 KRTAP1-4P0C5Y4 121 aa4.32□□□□□ -1.72
HNRNPC-211ENST00000554455 KRTAP3-1Q9BYR8 98 aa4.32□□□□□ -1.72
HNRNPC-211ENST00000554455 HECTD4Q9Y4D8 3996 aa4.32□□□□□ -1.72
HNRNPC-211ENST00000554455 COL7A1Q02388 2944 aa4.32□□□□□ -1.72
HNRNPC-211ENST00000554455 KRTAP10-2P60368 255 aa4.32□□□□□ -1.72
HNRNPC-211ENST00000554455 STAB2Q8WWQ8 2551 aa4.31□□□□□ -1.72
HNRNPC-211ENST00000554455 DNAH6Q9C0G6 4158 aa4.31□□□□□ -1.72
HNRNPC-211ENST00000554455 STARD9Q9P2P6 4700 aa4.3□□□□□ -1.72
HNRNPC-211ENST00000554455 RPS29P62273 56 aaKnown RBP4.3□□□□□ -1.72
HNRNPC-211ENST00000554455 KRTAP12-2P59991 146 aa4.3□□□□□ -1.72
HNRNPC-211ENST00000554455 KRTAP10-1P60331 282 aa4.29□□□□□ -1.72
HNRNPC-211ENST00000554455 KRTAP9-7A8MTY7 169 aa4.28□□□□□ -1.72
HNRNPC-211ENST00000554455 A0A0D9SG42 100 aa4.27□□□□□ -1.73
HNRNPC-211ENST00000554455 DNAH2Q9P225 4427 aa4.27□□□□□ -1.73
HNRNPC-211ENST00000554455 KRTAP12-1P59990 96 aa4.27□□□□□ -1.73
HNRNPC-211ENST00000554455 SPRR5A0A1B0GTR4 108 aa4.25□□□□□ -1.73
HNRNPC-211ENST00000554455 RYR2Q92736 4967 aa4.23□□□□□ -1.73
HNRNPC-211ENST00000554455 KRTAP19-4Q3LI73 84 aa4.23□□□□□ -1.73
HNRNPC-211ENST00000554455 PP632Q6XCG6 107 aa4.22□□□□□ -1.73
HNRNPC-211ENST00000554455 HYDINQ4G0P3 5121 aa4.2□□□□□ -1.74
HNRNPC-211ENST00000554455 KRTAP10-8P60410 259 aa4.19□□□□□ -1.74
HNRNPC-211ENST00000554455 SACSQ9NZJ4 4579 aa4.19□□□□□ -1.74
HNRNPC-211ENST00000554455 DNAH11Q96DT5 4516 aa4.19□□□□□ -1.74
HNRNPC-211ENST00000554455 DNAH5Q8TE73 4624 aa4.17□□□□□ -1.74
HNRNPC-211ENST00000554455 KMT2AQ03164 3969 aa4.16□□□□□ -1.74
HNRNPC-211ENST00000554455 LCE5AQ5TCM9 118 aa4.15□□□□□ -1.74
HNRNPC-211ENST00000554455 PCLOQ9Y6V0 5065 aa4.14□□□□□ -1.75
HNRNPC-211ENST00000554455 KRTAP9-3Q9BYQ3 159 aa4.13□□□□□ -1.75
HNRNPC-211ENST00000554455 HERC2O95714 4834 aa4.12□□□□□ -1.75
HNRNPC-211ENST00000554455 PKD1P98161 4303 aa4.11□□□□□ -1.75
HNRNPC-211ENST00000554455 M0QZ58 72 aa4.11□□□□□ -1.75
HNRNPC-211ENST00000554455 LRP1BQ9NZR2 4599 aa4.09□□□□□ -1.75
HNRNPC-211ENST00000554455 RYR1P21817 5038 aa4.08□□□□□ -1.76
HNRNPC-211ENST00000554455 KRTAP10-4P60372 401 aaPredicted RBP4.08□□□□□ -1.76
HNRNPC-211ENST00000554455 C9orf92A6NGG3 77 aa4.07□□□□□ -1.76
HNRNPC-211ENST00000554455 FAT2Q9NYQ8 4349 aa4.06□□□□□ -1.76
HNRNPC-211ENST00000554455 A0A1B0GVY2 172 aa4.04□□□□□ -1.76
HNRNPC-211ENST00000554455 MYCBP2O75592 4640 aa4.04□□□□□ -1.76
HNRNPC-211ENST00000554455 DMBT1Q9UGM3 2413 aaPredicted RBP4.03□□□□□ -1.76
HNRNPC-211ENST00000554455 VPS13BQ7Z7G8 4022 aa4.02□□□□□ -1.77
HNRNPC-211ENST00000554455 KIAA1109Q2LD37 5005 aa4.01□□□□□ -1.77
HNRNPC-211ENST00000554455 SMR3BP02814 79 aaPredicted RBP4.01□□□□□ -1.77
HNRNPC-211ENST00000554455 PKHD1L1Q86WI1 4243 aa4□□□□□ -1.77
HNRNPC-211ENST00000554455 Q5VSD8 79 aa3.97□□□□□ -1.77
HNRNPC-211ENST00000554455 PKHD1P08F94 4074 aa3.96□□□□□ -1.78
HNRNPC-211ENST00000554455 APOBP04114 4563 aaKnown RBP3.95□□□□□ -1.78
HNRNPC-211ENST00000554455 ABCA13Q86UQ4 5058 aa3.95□□□□□ -1.78
HNRNPC-211ENST00000554455 DYNC1H1Q14204 4646 aaKnown RBP3.93□□□□□ -1.78
HNRNPC-211ENST00000554455 HERC1Q15751 4861 aa3.88□□□□□ -1.79
HNRNPC-211ENST00000554455 UBR4Q5T4S7 5183 aa3.84□□□□□ -1.79
HNRNPC-211ENST00000554455 TNXBP22105 4242 aa3.83□□□□□ -1.8
HNRNPC-211ENST00000554455 FAT1Q14517 4588 aa3.82□□□□□ -1.8
HNRNPC-211ENST00000554455 FAT3Q8TDW7 4589 aa3.81□□□□□ -1.8
HNRNPC-211ENST00000554455 HSPG2P98160 4391 aa3.8□□□□□ -1.8
HNRNPC-211ENST00000554455 LRP1Q07954 4544 aaKnown RBP3.77□□□□□ -1.81
HNRNPC-211ENST00000554455 MT1HL1P0DM35 61 aa3.76□□□□□ -1.81
HNRNPC-211ENST00000554455 TNP1P09430 55 aa3.65□□□□□ -1.83
HNRNPC-211ENST00000554455 KRTAP10-10P60014 251 aa3.59□□□□□ -1.83
HNRNPC-211ENST00000554455 HMCN2Q8NDA2 5059 aa3.59□□□□□ -1.84
HNRNPC-211ENST00000554455 FLGP20930 4061 aaPredicted RBP3.57□□□□□ -1.84
HNRNPC-211ENST00000554455 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
HNRNPC-211ENST00000554455 RNF213Q63HN8 5207 aa3.53□□□□□ -1.84
HNRNPC-211ENST00000554455 KRTAP19-2Q3LHN2 52 aa3.49□□□□□ -1.85
HNRNPC-211ENST00000554455 KRTAP4-1Q9BYQ7 146 aa3.48□□□□□ -1.85
HNRNPC-211ENST00000554455 LRP2P98164 4655 aa3.46□□□□□ -1.86
HNRNPC-211ENST00000554455 LPAP08519 4548 aa3.43□□□□□ -1.86
HNRNPC-211ENST00000554455 MUC17Q685J3 4493 aa3.42□□□□□ -1.86
HNRNPC-211ENST00000554455 KRTAP8-1Q8IUC2 63 aa3.34□□□□□ -1.87
HNRNPC-211ENST00000554455 KRTAP10-12P60413 245 aa3.33□□□□□ -1.88
HNRNPC-211ENST00000554455 KRTAP2-2Q9BYT5 123 aa3.31□□□□□ -1.88
HNRNPC-211ENST00000554455 FAT4Q6V0I7 4981 aa3.3□□□□□ -1.88
HNRNPC-211ENST00000554455 CRCT1Q9UGL9 99 aa3.29□□□□□ -1.88
HNRNPC-211ENST00000554455 MUC2Q02817 5179 aa3.28□□□□□ -1.88
HNRNPC-211ENST00000554455 SPRR2GQ9BYE4 73 aa3.27□□□□□ -1.89
HNRNPC-211ENST00000554455 LCE3AQ5TA76 89 aa3.26□□□□□ -1.89
HNRNPC-211ENST00000554455 FSIP2Q5CZC0 6907 aa3.25□□□□□ -1.89
HNRNPC-211ENST00000554455 KRTAP2-3P0C7H8 128 aa3.23□□□□□ -1.89
HNRNPC-211ENST00000554455 KRTAP2-4Q9BYR9 128 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms