RNA–Protein interactions for RNA: ENST00000554455.5

HNRNPC-211, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-211ENST00000554455 AEBP2Q6ZN18 517 aaPredicted RBP16.73■□□□□ 0.27
HNRNPC-211ENST00000554455 PELP1Q8IZL8 1130 aaKnown RBP15.86■□□□□ 0.13
HNRNPC-211ENST00000554455 CHIC1Q5VXU3 224 aa15.85■□□□□ 0.13
HNRNPC-211ENST00000554455 MYT1Q01538 1121 aa15.75■□□□□ 0.11
HNRNPC-211ENST00000554455 NISCHQ9Y2I1 1504 aa15.69■□□□□ 0.1
HNRNPC-211ENST00000554455 TTBK1Q5TCY1 1321 aaPredicted RBP15.32■□□□□ 0.04
HNRNPC-211ENST00000554455 PRKCSHP14314 528 aaPredicted RBP14.5□□□□□ -0.09
HNRNPC-211ENST00000554455 APLP2Q06481 763 aa14.45□□□□□ -0.1
HNRNPC-211ENST00000554455 ERICH6Q7L0X2 663 aa14.43□□□□□ -0.1
HNRNPC-211ENST00000554455 SLC24A1O60721 1099 aa14.42□□□□□ -0.1
HNRNPC-211ENST00000554455 HRCP23327 699 aa14.29□□□□□ -0.12
HNRNPC-211ENST00000554455 SENP3Q9H4L4 574 aaPredicted RBP14.17□□□□□ -0.14
HNRNPC-211ENST00000554455 BCL11AQ9H165 835 aa14.04□□□□□ -0.16
HNRNPC-211ENST00000554455 PHF23Q9BUL5 403 aaPredicted RBP14.03□□□□□ -0.16
HNRNPC-211ENST00000554455 SCAF1Q9H7N4 1312 aaKnown RBP13.98□□□□□ -0.17
HNRNPC-211ENST00000554455 DAXXQ9UER7 740 aaPredicted RBP13.92□□□□□ -0.18
HNRNPC-211ENST00000554455 POTEDQ86YR6 584 aa13.81□□□□□ -0.2
HNRNPC-211ENST00000554455 FAM9AQ8IZU1 332 aaPredicted RBP13.8□□□□□ -0.2
HNRNPC-211ENST00000554455 CENPBP07199 599 aaPredicted RBP13.68□□□□□ -0.22
HNRNPC-211ENST00000554455 PPARGC1BQ86YN6 1023 aaKnown RBP13.45□□□□□ -0.26
HNRNPC-211ENST00000554455 ACIN1Q9UKV3 1341 aaKnown RBP13.42□□□□□ -0.26
HNRNPC-211ENST00000554455 CCDC180Q9P1Z9 1646 aa13.41□□□□□ -0.26
HNRNPC-211ENST00000554455 EIF5BO60841 1220 aaKnown RBP13.41□□□□□ -0.26
HNRNPC-211ENST00000554455 ANP32EQ9BTT0 268 aa13.35□□□□□ -0.27
HNRNPC-211ENST00000554455 ZCCHC6Q5VYS8 1495 aaKnown RBP13.33□□□□□ -0.28
HNRNPC-211ENST00000554455 ZEB1P37275 1124 aaPredicted RBP13.27□□□□□ -0.28
HNRNPC-211ENST00000554455 FOXD1Q16676 465 aa13.27□□□□□ -0.29
HNRNPC-211ENST00000554455 UBE2Q2Q8WVN8 375 aa13.24□□□□□ -0.29
HNRNPC-211ENST00000554455 GTF3C3Q9Y5Q9 886 aa13.17□□□□□ -0.3
HNRNPC-211ENST00000554455 SHROOM4Q9ULL8 1493 aa13.16□□□□□ -0.3
HNRNPC-211ENST00000554455 NEUROD1Q13562 356 aa13.14□□□□□ -0.31
HNRNPC-211ENST00000554455 CSRNP3Q8WYN3 585 aa13.05□□□□□ -0.32
HNRNPC-211ENST00000554455 PCGF6Q9BYE7 350 aa13.04□□□□□ -0.32
HNRNPC-211ENST00000554455 DCAF1Q9Y4B6 1507 aa13.04□□□□□ -0.32
HNRNPC-211ENST00000554455 MYO15BQ96JP2 1530 aa13.03□□□□□ -0.32
HNRNPC-211ENST00000554455 SUPT5HO00267 1087 aaKnown RBP12.97□□□□□ -0.33
HNRNPC-211ENST00000554455 NCBP3Q53F19 620 aaKnown RBP12.89□□□□□ -0.35
HNRNPC-211ENST00000554455 CLSPNQ9HAW4 1339 aa12.89□□□□□ -0.35
HNRNPC-211ENST00000554455 ERICH6BQ5W0A0 696 aa12.89□□□□□ -0.35
HNRNPC-211ENST00000554455 PLEKHG5O94827 1062 aa12.86□□□□□ -0.35
HNRNPC-211ENST00000554455 ANO8Q9HCE9 1232 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-211ENST00000554455 PODXL2Q9NZ53 605 aa12.84□□□□□ -0.35
HNRNPC-211ENST00000554455 MYT1LQ9UL68 1186 aa12.84□□□□□ -0.35
HNRNPC-211ENST00000554455 PKNOX2Q96KN3 472 aa12.82□□□□□ -0.36
HNRNPC-211ENST00000554455 ARXQ96QS3 562 aa12.75□□□□□ -0.37
HNRNPC-211ENST00000554455 TRIM26Q12899 539 aaPredicted RBP12.67□□□□□ -0.38
HNRNPC-211ENST00000554455 TSHZ2Q9NRE2 1034 aa12.66□□□□□ -0.38
HNRNPC-211ENST00000554455 PLPPR3Q6T4P5 718 aa12.64□□□□□ -0.39
HNRNPC-211ENST00000554455 ABCC9O60706 1549 aa12.62□□□□□ -0.39
HNRNPC-211ENST00000554455 RANGAP1P46060 587 aaPredicted RBP12.61□□□□□ -0.39
HNRNPC-211ENST00000554455 NEFLP07196 543 aa12.59□□□□□ -0.39
HNRNPC-211ENST00000554455 DCAF8L2P0C7V8 631 aa12.58□□□□□ -0.39
HNRNPC-211ENST00000554455 SALL2Q9Y467 1007 aaPredicted RBP12.57□□□□□ -0.4
HNRNPC-211ENST00000554455 PPP6R1Q9UPN7 881 aa12.46□□□□□ -0.42
HNRNPC-211ENST00000554455 PDIA4P13667 645 aaKnown RBP12.45□□□□□ -0.42
HNRNPC-211ENST00000554455 DIEXFQ68CQ4 756 aaKnown RBP12.44□□□□□ -0.42
HNRNPC-211ENST00000554455 KLHL34Q8N239 644 aa12.41□□□□□ -0.42
HNRNPC-211ENST00000554455 RSF1Q96T23 1441 aaPredicted RBP12.4□□□□□ -0.42
HNRNPC-211ENST00000554455 PDE4CQ08493 712 aa12.4□□□□□ -0.42
HNRNPC-211ENST00000554455 SUPT16HQ9Y5B9 1047 aaKnown RBP12.4□□□□□ -0.42
HNRNPC-211ENST00000554455 RB1CC1Q8TDY2 1594 aa12.38□□□□□ -0.43
HNRNPC-211ENST00000554455 SCRIBQ14160 1630 aa12.38□□□□□ -0.43
HNRNPC-211ENST00000554455 ADRA2BP18089 450 aa12.38□□□□□ -0.43
HNRNPC-211ENST00000554455 PIAS4Q8N2W9 510 aaPredicted RBP12.36□□□□□ -0.43
HNRNPC-211ENST00000554455 CCDC136Q96JN2 1154 aa12.36□□□□□ -0.43
HNRNPC-211ENST00000554455 DEKP35659 375 aaKnown RBP12.35□□□□□ -0.43
HNRNPC-211ENST00000554455 MSH5O43196 834 aa12.34□□□□□ -0.43
HNRNPC-211ENST00000554455 FGD1P98174 961 aa12.33□□□□□ -0.44
HNRNPC-211ENST00000554455 GLIPR1L2Q4G1C9 344 aa12.32□□□□□ -0.44
HNRNPC-211ENST00000554455 NACADO15069 1562 aa12.32□□□□□ -0.44
HNRNPC-211ENST00000554455 LOC105371045A0A1W2PR82 267 aa12.3□□□□□ -0.44
HNRNPC-211ENST00000554455 TRIM41Q8WV44 630 aa12.3□□□□□ -0.44
HNRNPC-211ENST00000554455 FANCIQ9NVI1 1328 aa12.3□□□□□ -0.44
HNRNPC-211ENST00000554455 TAF7LQ5H9L4 462 aa12.26□□□□□ -0.45
HNRNPC-211ENST00000554455 AAMPQ13685 434 aa12.23□□□□□ -0.45
HNRNPC-211ENST00000554455 RBM19Q9Y4C8 960 aaKnown RBP12.21□□□□□ -0.45
HNRNPC-211ENST00000554455 TIMELESSQ9UNS1 1208 aa12.2□□□□□ -0.46
HNRNPC-211ENST00000554455 HOMEZQ8IX15 550 aa12.19□□□□□ -0.46
HNRNPC-211ENST00000554455 ZMYND15Q9H091 742 aa12.16□□□□□ -0.46
HNRNPC-211ENST00000554455 RSPH6AQ9H0K4 717 aa12.15□□□□□ -0.46
HNRNPC-211ENST00000554455 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.15□□□□□ -0.46
HNRNPC-211ENST00000554455 MROH2BQ7Z745 1585 aa12.13□□□□□ -0.47
HNRNPC-211ENST00000554455 BAZ1AQ9NRL2 1556 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-211ENST00000554455 CECR2Q9BXF3 1484 aa12.11□□□□□ -0.47
HNRNPC-211ENST00000554455 EIF4G1Q04637 1599 aaKnown RBP12.11□□□□□ -0.47
HNRNPC-211ENST00000554455 BCL11BQ9C0K0 894 aaPredicted RBP12.1□□□□□ -0.47
HNRNPC-211ENST00000554455 RTN4Q9NQC3 1192 aaKnown RBP12.1□□□□□ -0.47
HNRNPC-211ENST00000554455 C11orf95C9JLR9 678 aaPredicted RBP12.09□□□□□ -0.47
HNRNPC-211ENST00000554455 DNAJC5BQ9UF47 199 aa12.07□□□□□ -0.48
HNRNPC-211ENST00000554455 RBM10P98175 930 aaKnown RBP12.07□□□□□ -0.48
HNRNPC-211ENST00000554455 WIZO95785 1651 aa12.06□□□□□ -0.48
HNRNPC-211ENST00000554455 RSPH4AQ5TD94 716 aa12.05□□□□□ -0.48
HNRNPC-211ENST00000554455 ZNF326Q5BKZ1 582 aaKnown RBP12.05□□□□□ -0.48
HNRNPC-211ENST00000554455 ZNF316A6NFI3 1004 aaPredicted RBP12.02□□□□□ -0.48
HNRNPC-211ENST00000554455 IL27Q8NEV9 243 aa12.02□□□□□ -0.49
HNRNPC-211ENST00000554455 YTHDC1Q96MU7 727 aaKnown RBP12.02□□□□□ -0.49
HNRNPC-211ENST00000554455 BRD2P25440 801 aaKnown RBP12.01□□□□□ -0.49
HNRNPC-211ENST00000554455 TOP2AP11388 1531 aaKnown RBP11.99□□□□□ -0.49
HNRNPC-211ENST00000554455 CCER1Q8TC90 406 aaPredicted RBP11.99□□□□□ -0.49
HNRNPC-211ENST00000554455 A0A0U1RQG5 324 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms