RNA–Protein interactions for RNA: ENST00000550678.1

LINC02388-201, Transcript of long intergenic non-protein coding RNA 2388, humanhuman

TSL 2 BASIC

Gene LINC02388, Length 1,975 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02388-201ENST00000550678 RPL37P61927 97 aaKnown RBP3.25□□□□□ -1.89
LINC02388-201ENST00000550678 LYSTQ99698 3801 aa3.25□□□□□ -1.89
LINC02388-201ENST00000550678 ANK2Q01484 3957 aa3.24□□□□□ -1.89
LINC02388-201ENST00000550678 TENM1Q9UKZ4 2725 aa3.23□□□□□ -1.89
LINC02388-201ENST00000550678 KRTAP12-2P59991 146 aa3.23□□□□□ -1.89
LINC02388-201ENST00000550678 UBE2DNLQ8IWF7 75 aa3.23□□□□□ -1.89
LINC02388-201ENST00000550678 NBEAL1Q6ZS30 2694 aa3.22□□□□□ -1.89
LINC02388-201ENST00000550678 COL7A1Q02388 2944 aa3.22□□□□□ -1.89
LINC02388-201ENST00000550678 FRAS1Q86XX4 4008 aa3.2□□□□□ -1.9
LINC02388-201ENST00000550678 MEGF8Q7Z7M0 2845 aa3.2□□□□□ -1.9
LINC02388-201ENST00000550678 KRTAP5-9P26371 169 aa3.19□□□□□ -1.9
LINC02388-201ENST00000550678 DNAH9Q9NYC9 4486 aa3.19□□□□□ -1.9
LINC02388-201ENST00000550678 KRTAP13-2Q52LG2 175 aa3.17□□□□□ -1.9
LINC02388-201ENST00000550678 APLNQ9ULZ1 77 aa3.17□□□□□ -1.9
LINC02388-201ENST00000550678 NOTCH1P46531 2555 aa3.16□□□□□ -1.9
LINC02388-201ENST00000550678 DNAH17Q9UFH2 4485 aa3.16□□□□□ -1.9
LINC02388-201ENST00000550678 A0A0D9SG42 100 aa3.16□□□□□ -1.9
LINC02388-201ENST00000550678 DNAH3Q8TD57 4116 aa3.16□□□□□ -1.9
LINC02388-201ENST00000550678 TGP01266 2768 aa3.16□□□□□ -1.9
LINC02388-201ENST00000550678 KRTAP13-4Q3LI77 160 aa3.15□□□□□ -1.91
LINC02388-201ENST00000550678 PP632Q6XCG6 107 aa3.15□□□□□ -1.91
LINC02388-201ENST00000550678 MGAM2Q2M2H8 2515 aa3.15□□□□□ -1.91
LINC02388-201ENST00000550678 KRTAP10-6P60371 365 aaPredicted RBP3.14□□□□□ -1.91
LINC02388-201ENST00000550678 HUWE1Q7Z6Z7 4374 aaKnown RBP3.13□□□□□ -1.91
LINC02388-201ENST00000550678 S4R3F8 94 aa3.12□□□□□ -1.91
LINC02388-201ENST00000550678 VPS13DQ5THJ4 4388 aa3.11□□□□□ -1.91
LINC02388-201ENST00000550678 STAB2Q8WWQ8 2551 aa3.1□□□□□ -1.91
LINC02388-201ENST00000550678 DYNC2H1Q8NCM8 4307 aaKnown RBP3.1□□□□□ -1.91
LINC02388-201ENST00000550678 CMYA5Q8N3K9 4069 aa3.09□□□□□ -1.91
LINC02388-201ENST00000550678 HECTD4Q9Y4D8 3996 aa3.09□□□□□ -1.91
LINC02388-201ENST00000550678 MT3P25713 68 aa3.09□□□□□ -1.91
LINC02388-201ENST00000550678 KRTAP1-4P0C5Y4 121 aa3.05□□□□□ -1.92
LINC02388-201ENST00000550678 PRKDCP78527 4128 aaKnown RBP3.04□□□□□ -1.92
LINC02388-201ENST00000550678 DMBT1Q9UGM3 2413 aaPredicted RBP3.04□□□□□ -1.92
LINC02388-201ENST00000550678 KRTAP12-1P59990 96 aa3.04□□□□□ -1.92
LINC02388-201ENST00000550678 DNAH7Q8WXX0 4024 aa3.03□□□□□ -1.92
LINC02388-201ENST00000550678 PLECQ15149 4684 aaKnown RBP3.03□□□□□ -1.92
LINC02388-201ENST00000550678 C9orf92A6NGG3 77 aa3.01□□□□□ -1.93
LINC02388-201ENST00000550678 RPS29P62273 56 aaKnown RBP3.01□□□□□ -1.93
LINC02388-201ENST00000550678 DNAH2Q9P225 4427 aa3.01□□□□□ -1.93
LINC02388-201ENST00000550678 DNAH11Q96DT5 4516 aa3.01□□□□□ -1.93
LINC02388-201ENST00000550678 DNAH6Q9C0G6 4158 aa3.01□□□□□ -1.93
LINC02388-201ENST00000550678 SPRR5A0A1B0GTR4 108 aa2.99□□□□□ -1.93
LINC02388-201ENST00000550678 KMT2AQ03164 3969 aa2.98□□□□□ -1.93
LINC02388-201ENST00000550678 LRP1BQ9NZR2 4599 aa2.94□□□□□ -1.94
LINC02388-201ENST00000550678 A0A1B0GVY2 172 aa2.94□□□□□ -1.94
LINC02388-201ENST00000550678 KRTAP2-2Q9BYT5 123 aa2.94□□□□□ -1.94
LINC02388-201ENST00000550678 M0QZ58 72 aa2.93□□□□□ -1.94
LINC02388-201ENST00000550678 SACSQ9NZJ4 4579 aa2.92□□□□□ -1.94
LINC02388-201ENST00000550678 DNAH5Q8TE73 4624 aa2.92□□□□□ -1.94
LINC02388-201ENST00000550678 KRTAP5-4Q6L8H1 288 aa2.91□□□□□ -1.94
LINC02388-201ENST00000550678 KRTAP10-1P60331 282 aa2.9□□□□□ -1.95
LINC02388-201ENST00000550678 STARD9Q9P2P6 4700 aa2.89□□□□□ -1.95
LINC02388-201ENST00000550678 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
LINC02388-201ENST00000550678 LCE1AQ5T7P2 110 aa2.89□□□□□ -1.95
LINC02388-201ENST00000550678 KMT2CQ8NEZ4 4911 aaKnown RBP2.88□□□□□ -1.95
LINC02388-201ENST00000550678 MYCBP2O75592 4640 aa2.86□□□□□ -1.95
LINC02388-201ENST00000550678 VPS13BQ7Z7G8 4022 aa2.86□□□□□ -1.95
LINC02388-201ENST00000550678 RYR3Q15413 4870 aa2.85□□□□□ -1.95
LINC02388-201ENST00000550678 HYDINQ4G0P3 5121 aa2.84□□□□□ -1.95
LINC02388-201ENST00000550678 APOBP04114 4563 aaKnown RBP2.83□□□□□ -1.96
LINC02388-201ENST00000550678 PKHD1L1Q86WI1 4243 aa2.83□□□□□ -1.96
LINC02388-201ENST00000550678 RYR2Q92736 4967 aa2.82□□□□□ -1.96
LINC02388-201ENST00000550678 LRP1Q07954 4544 aaKnown RBP2.79□□□□□ -1.96
LINC02388-201ENST00000550678 BIRC6Q9NR09 4857 aa2.79□□□□□ -1.96
LINC02388-201ENST00000550678 Q5VSD8 79 aa2.78□□□□□ -1.96
LINC02388-201ENST00000550678 PKD1P98161 4303 aa2.78□□□□□ -1.96
LINC02388-201ENST00000550678 FAT2Q9NYQ8 4349 aa2.77□□□□□ -1.97
LINC02388-201ENST00000550678 EPPK1P58107 5090 aaKnown RBP2.76□□□□□ -1.97
LINC02388-201ENST00000550678 PKHD1P08F94 4074 aa2.75□□□□□ -1.97
LINC02388-201ENST00000550678 HMCN1Q96RW7 5635 aa2.74□□□□□ -1.97
LINC02388-201ENST00000550678 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
LINC02388-201ENST00000550678 FAT3Q8TDW7 4589 aa2.72□□□□□ -1.97
LINC02388-201ENST00000550678 TNXBP22105 4242 aa2.71□□□□□ -1.98
LINC02388-201ENST00000550678 SMR3BP02814 79 aaPredicted RBP2.7□□□□□ -1.98
LINC02388-201ENST00000550678 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
LINC02388-201ENST00000550678 DYNC1H1Q14204 4646 aaKnown RBP2.69□□□□□ -1.98
LINC02388-201ENST00000550678 KRTAP10-4P60372 401 aaPredicted RBP2.69□□□□□ -1.98
LINC02388-201ENST00000550678 HSPG2P98160 4391 aa2.69□□□□□ -1.98
LINC02388-201ENST00000550678 KIAA1109Q2LD37 5005 aa2.68□□□□□ -1.98
LINC02388-201ENST00000550678 HERC2O95714 4834 aa2.68□□□□□ -1.98
LINC02388-201ENST00000550678 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
LINC02388-201ENST00000550678 FAT1Q14517 4588 aa2.66□□□□□ -1.98
LINC02388-201ENST00000550678 LCE3CQ5T5A8 94 aa2.65□□□□□ -1.99
LINC02388-201ENST00000550678 KRTAP10-10P60014 251 aa2.64□□□□□ -1.99
LINC02388-201ENST00000550678 KRTAP10-7P60409 375 aaPredicted RBP2.63□□□□□ -1.99
LINC02388-201ENST00000550678 TNP1P09430 55 aa2.62□□□□□ -1.99
LINC02388-201ENST00000550678 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
LINC02388-201ENST00000550678 RYR1P21817 5038 aa2.6□□□□□ -1.99
LINC02388-201ENST00000550678 ABCA13Q86UQ4 5058 aa2.59□□□□□ -2
LINC02388-201ENST00000550678 KRTAP10-12P60413 245 aa2.56□□□□□ -2
LINC02388-201ENST00000550678 LCE1EQ5T753 118 aa2.56□□□□□ -2
LINC02388-201ENST00000550678 PCLOQ9Y6V0 5065 aa2.55□□□□□ -2
LINC02388-201ENST00000550678 KRTAP6-3Q3LI67 103 aa2.55□□□□□ -2
LINC02388-201ENST00000550678 LPAP08519 4548 aa2.51□□□□□ -2.01
LINC02388-201ENST00000550678 HERC1Q15751 4861 aa2.47□□□□□ -2.01
LINC02388-201ENST00000550678 LRP2P98164 4655 aa2.46□□□□□ -2.02
LINC02388-201ENST00000550678 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
LINC02388-201ENST00000550678 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
LINC02388-201ENST00000550678 FLGP20930 4061 aaPredicted RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms