RNA–Protein interactions for RNA: ENST00000550678.1

LINC02388-201, Transcript of long intergenic non-protein coding RNA 2388, humanhuman

TSL 2 BASIC

Gene LINC02388, Length 1,975 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02388-201ENST00000550678 AEBP2Q6ZN18 517 aaPredicted RBP13.45□□□□□ -0.26
LINC02388-201ENST00000550678 CHIC1Q5VXU3 224 aa13.35□□□□□ -0.27
LINC02388-201ENST00000550678 SLC24A1O60721 1099 aa12.8□□□□□ -0.36
LINC02388-201ENST00000550678 POTEDQ86YR6 584 aa12.27□□□□□ -0.44
LINC02388-201ENST00000550678 EHMT2Q96KQ7 1210 aa12.17□□□□□ -0.46
LINC02388-201ENST00000550678 PHF23Q9BUL5 403 aaPredicted RBP11.99□□□□□ -0.49
LINC02388-201ENST00000550678 MYT1Q01538 1121 aa11.9□□□□□ -0.5
LINC02388-201ENST00000550678 SENP3Q9H4L4 574 aaPredicted RBP11.81□□□□□ -0.52
LINC02388-201ENST00000550678 TTBK1Q5TCY1 1321 aaPredicted RBP11.8□□□□□ -0.52
LINC02388-201ENST00000550678 DAXXQ9UER7 740 aaPredicted RBP11.8□□□□□ -0.52
LINC02388-201ENST00000550678 PELP1Q8IZL8 1130 aaKnown RBP11.74□□□□□ -0.53
LINC02388-201ENST00000550678 PLPPR3Q6T4P5 718 aa11.64□□□□□ -0.55
LINC02388-201ENST00000550678 PRKCSHP14314 528 aaPredicted RBP11.61□□□□□ -0.55
LINC02388-201ENST00000550678 APLP2Q06481 763 aa11.58□□□□□ -0.56
LINC02388-201ENST00000550678 RTN4Q9NQC3 1192 aaKnown RBP11.54□□□□□ -0.56
LINC02388-201ENST00000550678 ERICH6Q7L0X2 663 aa11.47□□□□□ -0.57
LINC02388-201ENST00000550678 CSRNP3Q8WYN3 585 aa11.45□□□□□ -0.58
LINC02388-201ENST00000550678 KCNA4P22459 653 aa11.41□□□□□ -0.58
LINC02388-201ENST00000550678 NCBP3Q53F19 620 aaKnown RBP11.36□□□□□ -0.59
LINC02388-201ENST00000550678 AMER1Q5JTC6 1135 aaPredicted RBP11.35□□□□□ -0.59
LINC02388-201ENST00000550678 ARXQ96QS3 562 aa10.99□□□□□ -0.65
LINC02388-201ENST00000550678 SLC4A1APQ9BWU0 796 aaKnown RBP10.98□□□□□ -0.65
LINC02388-201ENST00000550678 FOXD1Q16676 465 aa10.97□□□□□ -0.65
LINC02388-201ENST00000550678 TIMELESSQ9UNS1 1208 aa10.87□□□□□ -0.67
LINC02388-201ENST00000550678 EIF5BO60841 1220 aaKnown RBP10.86□□□□□ -0.67
LINC02388-201ENST00000550678 MSH5O43196 834 aa10.79□□□□□ -0.68
LINC02388-201ENST00000550678 RANGAP1P46060 587 aaPredicted RBP10.79□□□□□ -0.68
LINC02388-201ENST00000550678 ADRA2BP18089 450 aa10.75□□□□□ -0.69
LINC02388-201ENST00000550678 KLHL34Q8N239 644 aa10.67□□□□□ -0.7
LINC02388-201ENST00000550678 TULP1O00294 542 aaPredicted RBP10.66□□□□□ -0.7
LINC02388-201ENST00000550678 HOMEZQ8IX15 550 aa10.63□□□□□ -0.71
LINC02388-201ENST00000550678 TAOK2Q9UL54 1235 aa10.6□□□□□ -0.71
LINC02388-201ENST00000550678 ZBTB22O15209 634 aa10.59□□□□□ -0.71
LINC02388-201ENST00000550678 BCL11AQ9H165 835 aa10.56□□□□□ -0.72
LINC02388-201ENST00000550678 PLEKHG5O94827 1062 aa10.55□□□□□ -0.72
LINC02388-201ENST00000550678 BCANQ96GW7 911 aa10.52□□□□□ -0.72
LINC02388-201ENST00000550678 PODXL2Q9NZ53 605 aa10.48□□□□□ -0.73
LINC02388-201ENST00000550678 PLCB2Q00722 1185 aa10.45□□□□□ -0.74
LINC02388-201ENST00000550678 TPRNQ4KMQ1 711 aa10.41□□□□□ -0.74
LINC02388-201ENST00000550678 FAM9AQ8IZU1 332 aaPredicted RBP10.34□□□□□ -0.75
LINC02388-201ENST00000550678 HAP1P54257 671 aaPredicted RBP10.31□□□□□ -0.76
LINC02388-201ENST00000550678 NPM2Q86SE8 214 aaKnown RBP10.26□□□□□ -0.77
LINC02388-201ENST00000550678 GTF3C3Q9Y5Q9 886 aa10.25□□□□□ -0.77
LINC02388-201ENST00000550678 NPM3O75607 178 aaKnown RBP10.25□□□□□ -0.77
LINC02388-201ENST00000550678 HRCP23327 699 aa10.24□□□□□ -0.77
LINC02388-201ENST00000550678 FKBP8Q14318 412 aa10.24□□□□□ -0.77
LINC02388-201ENST00000550678 PPP6R1Q9UPN7 881 aa10.22□□□□□ -0.77
LINC02388-201ENST00000550678 PPP4R3CPQ6ZMV5 832 aa10.18□□□□□ -0.78
LINC02388-201ENST00000550678 NISCHQ9Y2I1 1504 aa10.16□□□□□ -0.78
LINC02388-201ENST00000550678 C14orf37Q86TY3 774 aa10.14□□□□□ -0.79
LINC02388-201ENST00000550678 VSIG10Q8N0Z9 540 aa10.11□□□□□ -0.79
LINC02388-201ENST00000550678 PIAS4Q8N2W9 510 aaPredicted RBP10.08□□□□□ -0.8
LINC02388-201ENST00000550678 PDIA4P13667 645 aaKnown RBP10.08□□□□□ -0.8
LINC02388-201ENST00000550678 FBXO3Q9UK99 471 aa10.06□□□□□ -0.8
LINC02388-201ENST00000550678 UBE2Q2Q8WVN8 375 aa10.05□□□□□ -0.8
LINC02388-201ENST00000550678 FOXD4L1Q9NU39 408 aa10.05□□□□□ -0.8
LINC02388-201ENST00000550678 TMEM132AQ24JP5 1023 aa10.03□□□□□ -0.8
LINC02388-201ENST00000550678 LOC105371045A0A1W2PR82 267 aa10.02□□□□□ -0.81
LINC02388-201ENST00000550678 TRIM26Q12899 539 aaPredicted RBP9.99□□□□□ -0.81
LINC02388-201ENST00000550678 KDM2AQ9Y2K7 1162 aa9.99□□□□□ -0.81
LINC02388-201ENST00000550678 PPARGC1BQ86YN6 1023 aaKnown RBP9.92□□□□□ -0.82
LINC02388-201ENST00000550678 CHMP4AQ9BY43 222 aa9.92□□□□□ -0.82
LINC02388-201ENST00000550678 PDE4CQ08493 712 aa9.91□□□□□ -0.82
LINC02388-201ENST00000550678 FBLN2P98095 1184 aa9.9□□□□□ -0.83
LINC02388-201ENST00000550678 DCAF8L2P0C7V8 631 aa9.86□□□□□ -0.83
LINC02388-201ENST00000550678 SCAF1Q9H7N4 1312 aaKnown RBP9.85□□□□□ -0.83
LINC02388-201ENST00000550678 SAMD1Q6SPF0 538 aaPredicted RBP9.83□□□□□ -0.84
LINC02388-201ENST00000550678 NEFLP07196 543 aa9.83□□□□□ -0.84
LINC02388-201ENST00000550678 PKNOX2Q96KN3 472 aa9.83□□□□□ -0.84
LINC02388-201ENST00000550678 SUPT5HO00267 1087 aaKnown RBP9.82□□□□□ -0.84
LINC02388-201ENST00000550678 UBTFP17480 764 aaKnown RBP9.79□□□□□ -0.84
LINC02388-201ENST00000550678 DHX37Q8IY37 1157 aaKnown RBP9.79□□□□□ -0.84
LINC02388-201ENST00000550678 TAF7LQ5H9L4 462 aa9.77□□□□□ -0.84
LINC02388-201ENST00000550678 CNKSR2Q8WXI2 1034 aa9.77□□□□□ -0.84
LINC02388-201ENST00000550678 PCGF6Q9BYE7 350 aa9.77□□□□□ -0.84
LINC02388-201ENST00000550678 BRD2P25440 801 aaKnown RBP9.75□□□□□ -0.85
LINC02388-201ENST00000550678 CDK11BP21127 795 aaKnown RBP9.74□□□□□ -0.85
LINC02388-201ENST00000550678 CDK11AQ9UQ88 783 aaPredicted RBP9.74□□□□□ -0.85
LINC02388-201ENST00000550678 CENPBP07199 599 aaPredicted RBP9.69□□□□□ -0.86
LINC02388-201ENST00000550678 CACNB1Q02641 598 aaPredicted RBP9.69□□□□□ -0.86
LINC02388-201ENST00000550678 BCL11BQ9C0K0 894 aaPredicted RBP9.68□□□□□ -0.86
LINC02388-201ENST00000550678 FGD1P98174 961 aa9.63□□□□□ -0.87
LINC02388-201ENST00000550678 IGSF3O75054 1194 aa9.62□□□□□ -0.87
LINC02388-201ENST00000550678 ANO8Q9HCE9 1232 aaPredicted RBP9.62□□□□□ -0.87
LINC02388-201ENST00000550678 PAXIP1Q6ZW49 1069 aaPredicted RBP9.6□□□□□ -0.87
LINC02388-201ENST00000550678 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.59□□□□□ -0.87
LINC02388-201ENST00000550678 HSP90B1P14625 803 aaKnown RBP9.58□□□□□ -0.88
LINC02388-201ENST00000550678 SHROOM4Q9ULL8 1493 aa9.58□□□□□ -0.88
LINC02388-201ENST00000550678 CFAP44Q96MT7 982 aa9.57□□□□□ -0.88
LINC02388-201ENST00000550678 NBR1Q14596 966 aa9.57□□□□□ -0.88
LINC02388-201ENST00000550678 DNAJC5BQ9UF47 199 aa9.57□□□□□ -0.88
LINC02388-201ENST00000550678 MYO15BQ96JP2 1530 aa9.56□□□□□ -0.88
LINC02388-201ENST00000550678 ATXN8OSP0DMR3 200 aa9.55□□□□□ -0.88
LINC02388-201ENST00000550678 BBXQ8WY36 941 aaPredicted RBP9.54□□□□□ -0.88
LINC02388-201ENST00000550678 ACIN1Q9UKV3 1341 aaKnown RBP9.53□□□□□ -0.88
LINC02388-201ENST00000550678 ZEB1P37275 1124 aaPredicted RBP9.53□□□□□ -0.88
LINC02388-201ENST00000550678 PKD2Q13563 968 aa9.53□□□□□ -0.88
LINC02388-201ENST00000550678 TSHZ2Q9NRE2 1034 aa9.53□□□□□ -0.88
LINC02388-201ENST00000550678 HMGB1P09429 215 aaKnown RBP9.5□□□□□ -0.89
LINC02388-201ENST00000550678 DCAF1Q9Y4B6 1507 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms