RNA–Protein interactions for RNA: ENST00000517801.5

FAM49B-204, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-204ENST00000517801 ACACBO00763 2458 aa0.12□□□□□ -2.39
FAM49B-204ENST00000517801 KRTAP20-1Q3LI63 56 aa0.12□□□□□ -2.39
FAM49B-204ENST00000517801 SPRR2FQ96RM1 72 aa0.12□□□□□ -2.39
FAM49B-204ENST00000517801 TEP1Q99973 2627 aaKnown RBP0.12□□□□□ -2.39
FAM49B-204ENST00000517801 SPART-AS1P0CW21 52 aa0.11□□□□□ -2.39
FAM49B-204ENST00000517801 MYO18BQ8IUG5 2567 aa0.11□□□□□ -2.39
FAM49B-204ENST00000517801 TOP2AP11388 1531 aaKnown RBP0.11□□□□□ -2.39
FAM49B-204ENST00000517801 PKHD1L1Q86WI1 4243 aa0.11□□□□□ -2.39
FAM49B-204ENST00000517801 FAT3Q8TDW7 4589 aa0.11□□□□□ -2.39
FAM49B-204ENST00000517801 COL6A5A8TX70 2615 aa0.1□□□□□ -2.39
FAM49B-204ENST00000517801 AKAP9Q99996 3911 aa0.09□□□□□ -2.4
FAM49B-204ENST00000517801 CCDC168Q8NDH2 2452 aa0.09□□□□□ -2.4
FAM49B-204ENST00000517801 MGAM2Q2M2H8 2515 aa0.09□□□□□ -2.4
FAM49B-204ENST00000517801 KALRNO60229 2985 aa0.09□□□□□ -2.4
FAM49B-204ENST00000517801 HTTP42858 3142 aa0.09□□□□□ -2.4
FAM49B-204ENST00000517801 APOBP04114 4563 aaKnown RBP0.08□□□□□ -2.4
FAM49B-204ENST00000517801 MXRA5Q9NR99 2828 aa0.06□□□□□ -2.4
FAM49B-204ENST00000517801 DNAH2Q9P225 4427 aa0.05□□□□□ -2.4
FAM49B-204ENST00000517801 DNAH11Q96DT5 4516 aa0.05□□□□□ -2.4
FAM49B-204ENST00000517801 KRTAP8-1Q8IUC2 63 aa0.05□□□□□ -2.4
FAM49B-204ENST00000517801 RYR3Q15413 4870 aa0.05□□□□□ -2.4
FAM49B-204ENST00000517801 RANBP2P49792 3224 aaKnown RBP0.05□□□□□ -2.4
FAM49B-204ENST00000517801 COL12A1Q99715 3063 aa0.02□□□□□ -2.41
FAM49B-204ENST00000517801 DYNC2H1Q8NCM8 4307 aaKnown RBP0.02□□□□□ -2.41
FAM49B-204ENST00000517801 TLN2Q9Y4G6 2542 aa0.02□□□□□ -2.41
FAM49B-204ENST00000517801 WDR87Q6ZQQ6 2873 aa0.02□□□□□ -2.41
FAM49B-204ENST00000517801 LAMA5O15230 3695 aa0.02□□□□□ -2.41
FAM49B-204ENST00000517801 USP9XQ93008 2570 aaPredicted RBP0.01□□□□□ -2.41
FAM49B-204ENST00000517801 SPENQ96T58 3664 aaKnown RBP0.01□□□□□ -2.41
FAM49B-204ENST00000517801 VPS13DQ5THJ4 4388 aa0.01□□□□□ -2.41
FAM49B-204ENST00000517801 NBPF19A0A087WUL8 3843 aa0□□□□□ -2.41
FAM49B-204ENST00000517801 ABCA13Q86UQ4 5058 aa-0□□□□□ -2.41
FAM49B-204ENST00000517801 DNAH6Q9C0G6 4158 aa-0□□□□□ -2.41
FAM49B-204ENST00000517801 DEFB1P60022 68 aa-0.01□□□□□ -2.41
FAM49B-204ENST00000517801 HYDINQ4G0P3 5121 aa-0.02□□□□□ -2.41
FAM49B-204ENST00000517801 SMR3BP02814 79 aaPredicted RBP-0.02□□□□□ -2.41
FAM49B-204ENST00000517801 SNRPGP62308 76 aaKnown RBP-0.02□□□□□ -2.41
FAM49B-204ENST00000517801 RPL39P62891 51 aaKnown RBP-0.02□□□□□ -2.41
FAM49B-204ENST00000517801 KRTAP19-5Q3LI72 72 aa-0.02□□□□□ -2.41
FAM49B-204ENST00000517801 KRTAP19-7Q3SYF9 63 aa-0.02□□□□□ -2.41
FAM49B-204ENST00000517801 LAMA1P25391 3075 aa-0.02□□□□□ -2.41
FAM49B-204ENST00000517801 TRIOO75962 3097 aa-0.03□□□□□ -2.41
FAM49B-204ENST00000517801 TOMM7Q9P0U1 55 aa-0.03□□□□□ -2.41
FAM49B-204ENST00000517801 HERC1Q15751 4861 aa-0.05□□□□□ -2.42
FAM49B-204ENST00000517801 DNAH1Q9P2D7 4330 aa-0.05□□□□□ -2.42
FAM49B-204ENST00000517801 CELSR3Q9NYQ7 3312 aa-0.05□□□□□ -2.42
FAM49B-204ENST00000517801 KRTAP6-1Q3LI64 71 aa-0.05□□□□□ -2.42
FAM49B-204ENST00000517801 DNAH8Q96JB1 4490 aa-0.05□□□□□ -2.42
FAM49B-204ENST00000517801 USP9YO00507 2555 aaPredicted RBP-0.05□□□□□ -2.42
FAM49B-204ENST00000517801 FAT1Q14517 4588 aa-0.06□□□□□ -2.42
FAM49B-204ENST00000517801 EPPK1P58107 5090 aaKnown RBP-0.06□□□□□ -2.42
FAM49B-204ENST00000517801 SPTBN5Q9NRC6 3674 aaKnown RBP-0.07□□□□□ -2.42
FAM49B-204ENST00000517801 ITPR1Q14643 2758 aa-0.08□□□□□ -2.42
FAM49B-204ENST00000517801 FRYQ5TBA9 3013 aa-0.09□□□□□ -2.42
FAM49B-204ENST00000517801 MROH2BQ7Z745 1585 aa-0.1□□□□□ -2.42
FAM49B-204ENST00000517801 KRTAP19-8Q3LI54 63 aa-0.1□□□□□ -2.43
FAM49B-204ENST00000517801 RPL39LQ96EH5 51 aaKnown RBP-0.1□□□□□ -2.43
FAM49B-204ENST00000517801 MT1HP80294 61 aa-0.11□□□□□ -2.43
FAM49B-204ENST00000517801 ITPR3Q14573 2671 aa-0.11□□□□□ -2.43
FAM49B-204ENST00000517801 DNAH7Q8WXX0 4024 aa-0.12□□□□□ -2.43
FAM49B-204ENST00000517801 CHD7Q9P2D1 2997 aa-0.13□□□□□ -2.43
FAM49B-204ENST00000517801 SPTAN1Q13813 2472 aaKnown RBP-0.13□□□□□ -2.43
FAM49B-204ENST00000517801 STARD9Q9P2P6 4700 aa-0.13□□□□□ -2.43
FAM49B-204ENST00000517801 LEAP2Q969E1 77 aa-0.14□□□□□ -2.43
FAM49B-204ENST00000517801 MUC17Q685J3 4493 aa-0.14□□□□□ -2.43
FAM49B-204ENST00000517801 DUOX1Q9NRD9 1551 aa-0.15□□□□□ -2.43
FAM49B-204ENST00000517801 LINC01590Q5TEZ4 76 aa-0.15□□□□□ -2.43
FAM49B-204ENST00000517801 USH2AO75445 5202 aa-0.16□□□□□ -2.43
FAM49B-204ENST00000517801 CRYBG3Q68DQ2 2970 aa-0.18□□□□□ -2.44
FAM49B-204ENST00000517801 RELNP78509 3460 aa-0.18□□□□□ -2.44
FAM49B-204ENST00000517801 PLECQ15149 4684 aaKnown RBP-0.19□□□□□ -2.44
FAM49B-204ENST00000517801 ADGRG4Q8IZF6 3080 aa-0.19□□□□□ -2.44
FAM49B-204ENST00000517801 ZFHX4Q86UP3 3567 aa-0.19□□□□□ -2.44
FAM49B-204ENST00000517801 DNAH10Q8IVF4 4471 aa-0.2□□□□□ -2.44
FAM49B-204ENST00000517801 C5orf42Q9H799 3197 aa-0.2□□□□□ -2.44
FAM49B-204ENST00000517801 DOPEY1Q5JWR5 2465 aa-0.2□□□□□ -2.44
FAM49B-204ENST00000517801 GCC2Q8IWJ2 1684 aa-0.23□□□□□ -2.45
FAM49B-204ENST00000517801 MT1EP04732 61 aa-0.23□□□□□ -2.45
FAM49B-204ENST00000517801 CMYA5Q8N3K9 4069 aa-0.24□□□□□ -2.45
FAM49B-204ENST00000517801 MGAQ8IWI9 3026 aa-0.24□□□□□ -2.45
FAM49B-204ENST00000517801 CSMD1Q96PZ7 3565 aa-0.25□□□□□ -2.45
FAM49B-204ENST00000517801 DEFB136Q30KP8 78 aa-0.25□□□□□ -2.45
FAM49B-204ENST00000517801 LRBAP50851 2863 aa-0.26□□□□□ -2.45
FAM49B-204ENST00000517801 DYNC1H1Q14204 4646 aaKnown RBP-0.26□□□□□ -2.45
FAM49B-204ENST00000517801 DNAH17Q9UFH2 4485 aa-0.26□□□□□ -2.45
FAM49B-204ENST00000517801 MYO9AB2RTY4 2548 aa-0.29□□□□□ -2.46
FAM49B-204ENST00000517801 MT1LQ93083 61 aa-0.29□□□□□ -2.46
FAM49B-204ENST00000517801 LAMA3Q16787 3333 aa-0.29□□□□□ -2.46
FAM49B-204ENST00000517801 TEX15Q9BXT5 2789 aa-0.29□□□□□ -2.46
FAM49B-204ENST00000517801 MT1XP80297 61 aa-0.3□□□□□ -2.46
FAM49B-204ENST00000517801 RHPN1-AS1Q9BWJ2 59 aa-0.3□□□□□ -2.46
FAM49B-204ENST00000517801 ARHGAP5-AS1Q96IT6 56 aa-0.31□□□□□ -2.46
FAM49B-204ENST00000517801 CFAP46Q8IYW2 2715 aa-0.31□□□□□ -2.46
FAM49B-204ENST00000517801 SRCAPQ6ZRS2 3230 aa-0.33□□□□□ -2.46
FAM49B-204ENST00000517801 MT4P47944 62 aa-0.33□□□□□ -2.46
FAM49B-204ENST00000517801 KRTAP20-2Q3LI61 65 aa-0.33□□□□□ -2.46
FAM49B-204ENST00000517801 DEFB104AQ8WTQ1 72 aa-0.33□□□□□ -2.46
FAM49B-204ENST00000517801 DMXL2Q8TDJ6 3036 aa-0.34□□□□□ -2.46
FAM49B-204ENST00000517801 CEP250Q9BV73 2442 aa-0.37□□□□□ -2.47
FAM49B-204ENST00000517801 DNHD1Q96M86 4753 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms