RNA–Protein interactions for RNA: ENST00000492485.5

TRIOBP-211, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 1 (best)

Gene TRIOBP, Length 3,948 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-211ENST00000492485 RPS29P62273 56 aaKnown RBP6.27□□□□□ -1.41
TRIOBP-211ENST00000492485 DNAH7Q8WXX0 4024 aa6.26□□□□□ -1.41
TRIOBP-211ENST00000492485 DNAH5Q8TE73 4624 aa6.25□□□□□ -1.41
TRIOBP-211ENST00000492485 FAT3Q8TDW7 4589 aa6.24□□□□□ -1.41
TRIOBP-211ENST00000492485 DNAH17Q9UFH2 4485 aa6.18□□□□□ -1.42
TRIOBP-211ENST00000492485 SEC61BP60468 96 aaKnown RBP6.18□□□□□ -1.42
TRIOBP-211ENST00000492485 KRTAP10-6P60371 365 aaPredicted RBP6.16□□□□□ -1.42
TRIOBP-211ENST00000492485 DNAH6Q9C0G6 4158 aa6.15□□□□□ -1.42
TRIOBP-211ENST00000492485 DYNC2H1Q8NCM8 4307 aaKnown RBP6.11□□□□□ -1.43
TRIOBP-211ENST00000492485 PLAC4Q8WY50 150 aa6.11□□□□□ -1.43
TRIOBP-211ENST00000492485 DNAH2Q9P225 4427 aa6.1□□□□□ -1.43
TRIOBP-211ENST00000492485 KRTAP12-1P59990 96 aa6.09□□□□□ -1.43
TRIOBP-211ENST00000492485 VPS13BQ7Z7G8 4022 aa6.06□□□□□ -1.44
TRIOBP-211ENST00000492485 VPS13DQ5THJ4 4388 aa6.05□□□□□ -1.44
TRIOBP-211ENST00000492485 LRP1Q07954 4544 aaKnown RBP6.05□□□□□ -1.44
TRIOBP-211ENST00000492485 KRTAP3-3Q9BYR6 98 aa6.03□□□□□ -1.44
TRIOBP-211ENST00000492485 DYNC1H1Q14204 4646 aaKnown RBP6.01□□□□□ -1.45
TRIOBP-211ENST00000492485 HECTD4Q9Y4D8 3996 aa6□□□□□ -1.45
TRIOBP-211ENST00000492485 KRTAP3-2Q9BYR7 98 aa6□□□□□ -1.45
TRIOBP-211ENST00000492485 KIAA1109Q2LD37 5005 aa5.97□□□□□ -1.45
TRIOBP-211ENST00000492485 RYR1P21817 5038 aa5.97□□□□□ -1.45
TRIOBP-211ENST00000492485 APOBP04114 4563 aaKnown RBP5.95□□□□□ -1.46
TRIOBP-211ENST00000492485 PKHD1P08F94 4074 aa5.93□□□□□ -1.46
TRIOBP-211ENST00000492485 TNP1P09430 55 aa5.91□□□□□ -1.46
TRIOBP-211ENST00000492485 SACSQ9NZJ4 4579 aa5.9□□□□□ -1.47
TRIOBP-211ENST00000492485 HYDINQ4G0P3 5121 aa5.89□□□□□ -1.47
TRIOBP-211ENST00000492485 ALMS1Q8TCU4 4167 aa5.88□□□□□ -1.47
TRIOBP-211ENST00000492485 KRTAP10-4P60372 401 aaPredicted RBP5.85□□□□□ -1.47
TRIOBP-211ENST00000492485 KRTAP4-5Q9BYR2 181 aa5.85□□□□□ -1.47
TRIOBP-211ENST00000492485 LORP23490 312 aaPredicted RBP5.84□□□□□ -1.47
TRIOBP-211ENST00000492485 LRP2P98164 4655 aa5.82□□□□□ -1.48
TRIOBP-211ENST00000492485 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
TRIOBP-211ENST00000492485 MT1HL1P0DM35 61 aa5.78□□□□□ -1.48
TRIOBP-211ENST00000492485 KRTAP10-10P60014 251 aa5.72□□□□□ -1.49
TRIOBP-211ENST00000492485 RYR3Q15413 4870 aa5.72□□□□□ -1.49
TRIOBP-211ENST00000492485 FAT2Q9NYQ8 4349 aa5.69□□□□□ -1.5
TRIOBP-211ENST00000492485 PP632Q6XCG6 107 aa5.66□□□□□ -1.5
TRIOBP-211ENST00000492485 PKD1P98161 4303 aa5.65□□□□□ -1.51
TRIOBP-211ENST00000492485 KMT2CQ8NEZ4 4911 aaKnown RBP5.64□□□□□ -1.51
TRIOBP-211ENST00000492485 HSPG2P98160 4391 aa5.6□□□□□ -1.51
TRIOBP-211ENST00000492485 EPPK1P58107 5090 aaKnown RBP5.6□□□□□ -1.51
TRIOBP-211ENST00000492485 KRTAP17-1Q9BYP8 105 aa5.57□□□□□ -1.52
TRIOBP-211ENST00000492485 LPAP08519 4548 aa5.56□□□□□ -1.52
TRIOBP-211ENST00000492485 MUC2Q02817 5179 aa5.53□□□□□ -1.52
TRIOBP-211ENST00000492485 KRTAP4-1Q9BYQ7 146 aa5.52□□□□□ -1.53
TRIOBP-211ENST00000492485 PKHD1L1Q86WI1 4243 aa5.41□□□□□ -1.54
TRIOBP-211ENST00000492485 PCLOQ9Y6V0 5065 aa5.41□□□□□ -1.54
TRIOBP-211ENST00000492485 OBSCNQ5VST9 7968 aa5.39□□□□□ -1.55
TRIOBP-211ENST00000492485 HERC2O95714 4834 aa5.33□□□□□ -1.56
TRIOBP-211ENST00000492485 RNF213Q63HN8 5207 aa5.32□□□□□ -1.56
TRIOBP-211ENST00000492485 FSIP2Q5CZC0 6907 aa5.32□□□□□ -1.56
TRIOBP-211ENST00000492485 FAT4Q6V0I7 4981 aa5.31□□□□□ -1.56
TRIOBP-211ENST00000492485 RYR2Q92736 4967 aa5.3□□□□□ -1.56
TRIOBP-211ENST00000492485 LCE3AQ5TA76 89 aa5.29□□□□□ -1.56
TRIOBP-211ENST00000492485 ABCA13Q86UQ4 5058 aa5.27□□□□□ -1.57
TRIOBP-211ENST00000492485 TNXBP22105 4242 aa5.2□□□□□ -1.58
TRIOBP-211ENST00000492485 SYNE1Q8NF91 8797 aaKnown RBP5.14□□□□□ -1.59
TRIOBP-211ENST00000492485 UBR4Q5T4S7 5183 aa5.13□□□□□ -1.59
TRIOBP-211ENST00000492485 CRCT1Q9UGL9 99 aa5.13□□□□□ -1.59
TRIOBP-211ENST00000492485 HERC1Q15751 4861 aa5.11□□□□□ -1.59
TRIOBP-211ENST00000492485 PRO2289Q9P1D8 64 aa5.1□□□□□ -1.59
TRIOBP-211ENST00000492485 KRTAP10-12P60413 245 aa5.1□□□□□ -1.59
TRIOBP-211ENST00000492485 KRTAP12-3P60328 96 aa5.09□□□□□ -1.59
TRIOBP-211ENST00000492485 HMCN2Q8NDA2 5059 aa5.04□□□□□ -1.6
TRIOBP-211ENST00000492485 BIRC6Q9NR09 4857 aa5.02□□□□□ -1.61
TRIOBP-211ENST00000492485 MT1FP04733 61 aa4.95□□□□□ -1.62
TRIOBP-211ENST00000492485 INE1O15225 51 aa4.92□□□□□ -1.62
TRIOBP-211ENST00000492485 MT2AP02795 61 aa4.91□□□□□ -1.62
TRIOBP-211ENST00000492485 MT1HP80294 61 aa4.9□□□□□ -1.63
TRIOBP-211ENST00000492485 KRTAP19-1Q8IUB9 90 aa4.88□□□□□ -1.63
TRIOBP-211ENST00000492485 USH2AO75445 5202 aa4.86□□□□□ -1.63
TRIOBP-211ENST00000492485 DSTQ03001 7570 aaKnown RBP4.84□□□□□ -1.63
TRIOBP-211ENST00000492485 MUC17Q685J3 4493 aa4.82□□□□□ -1.64
TRIOBP-211ENST00000492485 SPRR2GQ9BYE4 73 aa4.8□□□□□ -1.64
TRIOBP-211ENST00000492485 KRTAP10-7P60409 375 aaPredicted RBP4.8□□□□□ -1.64
TRIOBP-211ENST00000492485 KMT2DO14686 5537 aa4.78□□□□□ -1.65
TRIOBP-211ENST00000492485 FCGBPQ9Y6R7 5405 aaPredicted RBP4.76□□□□□ -1.65
TRIOBP-211ENST00000492485 KRTAP19-5Q3LI72 72 aa4.73□□□□□ -1.65
TRIOBP-211ENST00000492485 KRTAP4-8A0A0G2JLE6 195 aa4.71□□□□□ -1.66
TRIOBP-211ENST00000492485 KRTAP4-8Q9BYQ9 185 aa4.71□□□□□ -1.66
TRIOBP-211ENST00000492485 KRTAP23-1A1A580 65 aa4.71□□□□□ -1.66
TRIOBP-211ENST00000492485 KRTAP10-5P60370 271 aa4.68□□□□□ -1.66
TRIOBP-211ENST00000492485 KRTAP19-2Q3LHN2 52 aa4.68□□□□□ -1.66
TRIOBP-211ENST00000492485 LCE2CQ5TA81 110 aa4.66□□□□□ -1.66
TRIOBP-211ENST00000492485 FLGP20930 4061 aaPredicted RBP4.66□□□□□ -1.66
TRIOBP-211ENST00000492485 KRTAP8-1Q8IUC2 63 aa4.66□□□□□ -1.66
TRIOBP-211ENST00000492485 MT1XP80297 61 aa4.63□□□□□ -1.67
TRIOBP-211ENST00000492485 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
TRIOBP-211ENST00000492485 MT1BP07438 61 aa4.59□□□□□ -1.67
TRIOBP-211ENST00000492485 KRTAP9-8Q9BYQ0 159 aa4.58□□□□□ -1.68
TRIOBP-211ENST00000492485 SPRR5A0A1B0GTR4 108 aa4.53□□□□□ -1.68
TRIOBP-211ENST00000492485 LCE3CQ5T5A8 94 aa4.53□□□□□ -1.68
TRIOBP-211ENST00000492485 KRTAP19-8Q3LI54 63 aa4.42□□□□□ -1.7
TRIOBP-211ENST00000492485 SYNE2Q8WXH0 6885 aaKnown RBP4.41□□□□□ -1.7
TRIOBP-211ENST00000492485 KRTAP9-3Q9BYQ3 159 aa4.36□□□□□ -1.71
TRIOBP-211ENST00000492485 LCE2BO14633 110 aa4.35□□□□□ -1.71
TRIOBP-211ENST00000492485 MT1GP13640 62 aa4.34□□□□□ -1.71
TRIOBP-211ENST00000492485 MUC12Q9UKN1 5478 aa4.3□□□□□ -1.72
TRIOBP-211ENST00000492485 LOC100996750A0A140TA64 210 aa4.28□□□□□ -1.72
TRIOBP-211ENST00000492485 LCE3BQ5TA77 95 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms