RNA–Protein interactions for RNA: ENST00000492485.5

TRIOBP-211, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 1 (best)

Gene TRIOBP, Length 3,948 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-211ENST00000492485 DCAF8L2P0C7V8 631 aa21.51■■□□□ 1.03
TRIOBP-211ENST00000492485 SUPT5HO00267 1087 aaKnown RBP21.39■■□□□ 1.01
TRIOBP-211ENST00000492485 NISCHQ9Y2I1 1504 aa21.31■■□□□ 1
TRIOBP-211ENST00000492485 SHROOM4Q9ULL8 1493 aa21.23■□□□□ 0.99
TRIOBP-211ENST00000492485 EHMT2Q96KQ7 1210 aa20.88■□□□□ 0.93
TRIOBP-211ENST00000492485 PCGF6Q9BYE7 350 aa20.58■□□□□ 0.88
TRIOBP-211ENST00000492485 FAM9AQ8IZU1 332 aaPredicted RBP20.19■□□□□ 0.82
TRIOBP-211ENST00000492485 PPARGC1BQ86YN6 1023 aaKnown RBP20.15■□□□□ 0.82
TRIOBP-211ENST00000492485 TTBK1Q5TCY1 1321 aaPredicted RBP20.14■□□□□ 0.82
TRIOBP-211ENST00000492485 LOC105371045A0A1W2PR82 267 aa19.84■□□□□ 0.77
TRIOBP-211ENST00000492485 HRCP23327 699 aa19.74■□□□□ 0.75
TRIOBP-211ENST00000492485 CHIC1Q5VXU3 224 aa19.53■□□□□ 0.72
TRIOBP-211ENST00000492485 RANGAP1P46060 587 aaPredicted RBP19.46■□□□□ 0.71
TRIOBP-211ENST00000492485 YTHDC1Q96MU7 727 aaKnown RBP19.45■□□□□ 0.7
TRIOBP-211ENST00000492485 CCER1Q8TC90 406 aaPredicted RBP19.35■□□□□ 0.69
TRIOBP-211ENST00000492485 TRIM41Q8WV44 630 aa19.34■□□□□ 0.69
TRIOBP-211ENST00000492485 TRIM26Q12899 539 aaPredicted RBP19.17■□□□□ 0.66
TRIOBP-211ENST00000492485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.13■□□□□ 0.65
TRIOBP-211ENST00000492485 CENPBP07199 599 aaPredicted RBP18.95■□□□□ 0.62
TRIOBP-211ENST00000492485 ZEB1P37275 1124 aaPredicted RBP18.92■□□□□ 0.62
TRIOBP-211ENST00000492485 UBTFP17480 764 aaKnown RBP18.89■□□□□ 0.61
TRIOBP-211ENST00000492485 APLP2Q06481 763 aa18.81■□□□□ 0.6
TRIOBP-211ENST00000492485 HNRNPUL2Q1KMD3 747 aaKnown RBP18.8■□□□□ 0.6
TRIOBP-211ENST00000492485 PELP1Q8IZL8 1130 aaKnown RBP18.78■□□□□ 0.6
TRIOBP-211ENST00000492485 GTF3C3Q9Y5Q9 886 aa18.77■□□□□ 0.6
TRIOBP-211ENST00000492485 MYO15BQ96JP2 1530 aa18.76■□□□□ 0.59
TRIOBP-211ENST00000492485 DIEXFQ68CQ4 756 aaKnown RBP18.69■□□□□ 0.58
TRIOBP-211ENST00000492485 ITGAEP38570 1179 aa18.66■□□□□ 0.58
TRIOBP-211ENST00000492485 SCAF1Q9H7N4 1312 aaKnown RBP18.65■□□□□ 0.58
TRIOBP-211ENST00000492485 ATP1B4Q9UN42 357 aaPredicted RBP18.61■□□□□ 0.57
TRIOBP-211ENST00000492485 NEUROD1Q13562 356 aa18.52■□□□□ 0.55
TRIOBP-211ENST00000492485 CNGB1Q14028 1251 aaPredicted RBP18.49■□□□□ 0.55
TRIOBP-211ENST00000492485 BCANQ96GW7 911 aa18.46■□□□□ 0.55
TRIOBP-211ENST00000492485 ACIN1Q9UKV3 1341 aaKnown RBP18.41■□□□□ 0.54
TRIOBP-211ENST00000492485 ERICH6Q7L0X2 663 aa18.21■□□□□ 0.51
TRIOBP-211ENST00000492485 NEFLP07196 543 aa18.12■□□□□ 0.49
TRIOBP-211ENST00000492485 ZNF316A6NFI3 1004 aaPredicted RBP18.09■□□□□ 0.49
TRIOBP-211ENST00000492485 POLR3GLQ9BT43 218 aa18.07■□□□□ 0.48
TRIOBP-211ENST00000492485 MIER1Q8N108 512 aa18.06■□□□□ 0.48
TRIOBP-211ENST00000492485 PABPN1Q86U42 306 aaKnown RBP eCLIP18.03■□□□□ 0.48
TRIOBP-211ENST00000492485 MYT1Q01538 1121 aa18■□□□□ 0.47
TRIOBP-211ENST00000492485 DCAF1Q9Y4B6 1507 aa17.98■□□□□ 0.47
TRIOBP-211ENST00000492485 HIRIP3Q9BW71 556 aaPredicted RBP17.94■□□□□ 0.46
TRIOBP-211ENST00000492485 FAM50AQ14320 339 aaKnown RBP17.86■□□□□ 0.45
TRIOBP-211ENST00000492485 ABCC9O60706 1549 aa17.85■□□□□ 0.45
TRIOBP-211ENST00000492485 SENP3-EIF4A1A0A087X0R7 540 aa17.82■□□□□ 0.44
TRIOBP-211ENST00000492485 P3H3Q8IVL6 736 aa17.79■□□□□ 0.44
TRIOBP-211ENST00000492485 TRIM52Q96A61 297 aa17.79■□□□□ 0.44
TRIOBP-211ENST00000492485 FKBP8Q14318 412 aa17.77■□□□□ 0.44
TRIOBP-211ENST00000492485 ZCCHC6Q5VYS8 1495 aaKnown RBP17.76■□□□□ 0.43
TRIOBP-211ENST00000492485 IRX6P78412 446 aaPredicted RBP17.76■□□□□ 0.43
TRIOBP-211ENST00000492485 CSRNP3Q8WYN3 585 aa17.76■□□□□ 0.43
TRIOBP-211ENST00000492485 DDX10Q13206 875 aaKnown RBP17.74■□□□□ 0.43
TRIOBP-211ENST00000492485 ARID3CA6NKF2 412 aa17.7■□□□□ 0.42
TRIOBP-211ENST00000492485 CCDC180Q9P1Z9 1646 aa17.61■□□□□ 0.41
TRIOBP-211ENST00000492485 SCRIBQ14160 1630 aa17.59■□□□□ 0.41
TRIOBP-211ENST00000492485 ZNF326Q5BKZ1 582 aaKnown RBP17.58■□□□□ 0.4
TRIOBP-211ENST00000492485 RSF1Q96T23 1441 aaPredicted RBP17.49■□□□□ 0.39
TRIOBP-211ENST00000492485 ANP32CO43423 234 aa17.49■□□□□ 0.39
TRIOBP-211ENST00000492485 HNRNPUQ00839 825 aaKnown RBP eCLIP17.45■□□□□ 0.38
TRIOBP-211ENST00000492485 SALL2Q9Y467 1007 aaPredicted RBP17.45■□□□□ 0.38
TRIOBP-211ENST00000492485 KCNH8Q96L42 1107 aa17.44■□□□□ 0.38
TRIOBP-211ENST00000492485 NBR1Q14596 966 aa17.44■□□□□ 0.38
TRIOBP-211ENST00000492485 SUPT16HQ9Y5B9 1047 aaKnown RBP17.42■□□□□ 0.38
TRIOBP-211ENST00000492485 NPM2Q86SE8 214 aaKnown RBP17.41■□□□□ 0.38
TRIOBP-211ENST00000492485 FAM9BQ8IZU0 186 aa17.41■□□□□ 0.38
TRIOBP-211ENST00000492485 CDK11AQ9UQ88 783 aaPredicted RBP17.38■□□□□ 0.37
TRIOBP-211ENST00000492485 CEP162Q5TB80 1403 aa17.36■□□□□ 0.37
TRIOBP-211ENST00000492485 SIN3AQ96ST3 1273 aa17.36■□□□□ 0.37
TRIOBP-211ENST00000492485 CHIC2Q9UKJ5 165 aa17.32■□□□□ 0.36
TRIOBP-211ENST00000492485 CECR2Q9BXF3 1484 aa17.29■□□□□ 0.36
TRIOBP-211ENST00000492485 RTL5Q5HYW3 569 aaPredicted RBP17.29■□□□□ 0.36
TRIOBP-211ENST00000492485 SOGA1O94964 1423 aa17.28■□□□□ 0.36
TRIOBP-211ENST00000492485 BCL11AQ9H165 835 aa17.27■□□□□ 0.35
TRIOBP-211ENST00000492485 ANP32EQ9BTT0 268 aa17.23■□□□□ 0.35
TRIOBP-211ENST00000492485 DAXXQ9UER7 740 aaPredicted RBP17.22■□□□□ 0.35
TRIOBP-211ENST00000492485 RB1CC1Q8TDY2 1594 aa17.2■□□□□ 0.34
TRIOBP-211ENST00000492485 CLIP1P30622 1438 aa17.19■□□□□ 0.34
TRIOBP-211ENST00000492485 TSHZ2Q9NRE2 1034 aa17.18■□□□□ 0.34
TRIOBP-211ENST00000492485 CLSPNQ9HAW4 1339 aa17.16■□□□□ 0.34
TRIOBP-211ENST00000492485 KANK4Q5T7N3 995 aaPredicted RBP17.15■□□□□ 0.34
TRIOBP-211ENST00000492485 SLC4A1APQ9BWU0 796 aaKnown RBP17.15■□□□□ 0.34
TRIOBP-211ENST00000492485 RTN4Q9NQC3 1192 aaKnown RBP17.15■□□□□ 0.34
TRIOBP-211ENST00000492485 MYT1LQ9UL68 1186 aa17.11■□□□□ 0.33
TRIOBP-211ENST00000492485 ARXQ96QS3 562 aa17.1■□□□□ 0.33
TRIOBP-211ENST00000492485 ZNF777Q9ULD5 760 aaPredicted RBP17.09■□□□□ 0.33
TRIOBP-211ENST00000492485 EIF5BO60841 1220 aaKnown RBP17.09■□□□□ 0.33
TRIOBP-211ENST00000492485 B4GALNT3Q6L9W6 998 aa17.09■□□□□ 0.33
TRIOBP-211ENST00000492485 ABCC8Q09428 1581 aa17.08■□□□□ 0.33
TRIOBP-211ENST00000492485 TONSLQ96HA7 1378 aa17.08■□□□□ 0.33
TRIOBP-211ENST00000492485 RRP7BPQ9NSQ0 103 aa17.08■□□□□ 0.32
TRIOBP-211ENST00000492485 CCDC88BA6NC98 1476 aa17.08■□□□□ 0.32
TRIOBP-211ENST00000492485 MRS2Q9HD23 443 aa17.07■□□□□ 0.32
TRIOBP-211ENST00000492485 RBM19Q9Y4C8 960 aaKnown RBP17.07■□□□□ 0.32
TRIOBP-211ENST00000492485 FBLN2P98095 1184 aa17.02■□□□□ 0.31
TRIOBP-211ENST00000492485 RUSC2Q8N2Y8 1516 aa17■□□□□ 0.31
TRIOBP-211ENST00000492485 CCDC136Q96JN2 1154 aa17■□□□□ 0.31
TRIOBP-211ENST00000492485 SENP3Q9H4L4 574 aaPredicted RBP16.98■□□□□ 0.31
TRIOBP-211ENST00000492485 KDM2AQ9Y2K7 1162 aa16.97■□□□□ 0.31
TRIOBP-211ENST00000492485 TNIKQ9UKE5 1360 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms