RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, humanhuman

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-204ENST00000490444 HTTP42858 3142 aa0.39□□□□□ -2.35
PUM3-204ENST00000490444 SACSQ9NZJ4 4579 aa0.39□□□□□ -2.35
PUM3-204ENST00000490444 WDR87Q6ZQQ6 2873 aa0.39□□□□□ -2.35
PUM3-204ENST00000490444 AHNAKQ09666 5890 aaKnown RBP0.37□□□□□ -2.35
PUM3-204ENST00000490444 KRTAP19-5Q3LI72 72 aa0.37□□□□□ -2.35
PUM3-204ENST00000490444 TLN2Q9Y4G6 2542 aa0.37□□□□□ -2.35
PUM3-204ENST00000490444 ITPR1Q14643 2758 aa0.37□□□□□ -2.35
PUM3-204ENST00000490444 DMXL2Q8TDJ6 3036 aa0.37□□□□□ -2.35
PUM3-204ENST00000490444 MXRA5Q9NR99 2828 aa0.37□□□□□ -2.35
PUM3-204ENST00000490444 LRBAP50851 2863 aa0.36□□□□□ -2.35
PUM3-204ENST00000490444 TGP01266 2768 aa0.36□□□□□ -2.35
PUM3-204ENST00000490444 MYO18BQ8IUG5 2567 aa0.36□□□□□ -2.35
PUM3-204ENST00000490444 DNAH11Q96DT5 4516 aa0.36□□□□□ -2.35
PUM3-204ENST00000490444 SPRR2EP22531 72 aa0.36□□□□□ -2.35
PUM3-204ENST00000490444 SPRR2FQ96RM1 72 aa0.36□□□□□ -2.35
PUM3-204ENST00000490444 TEP1Q99973 2627 aaKnown RBP0.36□□□□□ -2.35
PUM3-204ENST00000490444 MYCBP2O75592 4640 aa0.36□□□□□ -2.35
PUM3-204ENST00000490444 LAMA5O15230 3695 aa0.36□□□□□ -2.35
PUM3-204ENST00000490444 SVEP1Q4LDE5 3571 aa0.35□□□□□ -2.35
PUM3-204ENST00000490444 SPTBN5Q9NRC6 3674 aaKnown RBP0.35□□□□□ -2.35
PUM3-204ENST00000490444 STATHP02808 62 aa0.35□□□□□ -2.35
PUM3-204ENST00000490444 IGSF10Q6WRI0 2623 aa0.35□□□□□ -2.35
PUM3-204ENST00000490444 FASNP49327 2511 aaKnown RBP0.35□□□□□ -2.35
PUM3-204ENST00000490444 ADGRG4Q8IZF6 3080 aa0.35□□□□□ -2.35
PUM3-204ENST00000490444 MUC5BQ9HC84 5762 aaPredicted RBP0.35□□□□□ -2.35
PUM3-204ENST00000490444 CSMD1Q96PZ7 3565 aa0.35□□□□□ -2.35
PUM3-204ENST00000490444 LAMA3Q16787 3333 aa0.34□□□□□ -2.35
PUM3-204ENST00000490444 HUWE1Q7Z6Z7 4374 aaKnown RBP0.34□□□□□ -2.35
PUM3-204ENST00000490444 LAMA1P25391 3075 aa0.34□□□□□ -2.36
PUM3-204ENST00000490444 SYNE1Q8NF91 8797 aaKnown RBP0.34□□□□□ -2.36
PUM3-204ENST00000490444 LRP1Q07954 4544 aaKnown RBP0.34□□□□□ -2.36
PUM3-204ENST00000490444 ATMQ13315 3056 aa0.34□□□□□ -2.36
PUM3-204ENST00000490444 FRYLO94915 3013 aa0.33□□□□□ -2.36
PUM3-204ENST00000490444 USP9XQ93008 2570 aaPredicted RBP0.33□□□□□ -2.36
PUM3-204ENST00000490444 PRUNE2Q8WUY3 3088 aa0.33□□□□□ -2.36
PUM3-204ENST00000490444 A0A096LPF7 62 aa0.33□□□□□ -2.36
PUM3-204ENST00000490444 C5orf42Q9H799 3197 aa0.33□□□□□ -2.36
PUM3-204ENST00000490444 COL6A3P12111 3177 aa0.33□□□□□ -2.36
PUM3-204ENST00000490444 DYNC2H1Q8NCM8 4307 aaKnown RBP0.32□□□□□ -2.36
PUM3-204ENST00000490444 HSPG2P98160 4391 aa0.32□□□□□ -2.36
PUM3-204ENST00000490444 MAP1AP78559 2803 aaPredicted RBP0.32□□□□□ -2.36
PUM3-204ENST00000490444 RPS29P62273 56 aaKnown RBP0.32□□□□□ -2.36
PUM3-204ENST00000490444 DEFB108BQ8NET1 73 aa0.32□□□□□ -2.36
PUM3-204ENST00000490444 TEX15Q9BXT5 2789 aa0.32□□□□□ -2.36
PUM3-204ENST00000490444 PKHD1L1Q86WI1 4243 aa0.32□□□□□ -2.36
PUM3-204ENST00000490444 NIPBLQ6KC79 2804 aaeCLIP0.32□□□□□ -2.36
PUM3-204ENST00000490444 HECTD4Q9Y4D8 3996 aa0.31□□□□□ -2.36
PUM3-204ENST00000490444 FLGP20930 4061 aaPredicted RBP0.31□□□□□ -2.36
PUM3-204ENST00000490444 DNAH12Q6ZR08 3092 aa0.31□□□□□ -2.36
PUM3-204ENST00000490444 MAST4O15021 2626 aa0.31□□□□□ -2.36
PUM3-204ENST00000490444 CEP250Q9BV73 2442 aa0.31□□□□□ -2.36
PUM3-204ENST00000490444 CD52P31358 61 aa0.31□□□□□ -2.36
PUM3-204ENST00000490444 DNAH3Q8TD57 4116 aa0.31□□□□□ -2.36
PUM3-204ENST00000490444 MGAM2Q2M2H8 2515 aa0.31□□□□□ -2.36
PUM3-204ENST00000490444 FLNAP21333 2647 aaKnown RBP0.31□□□□□ -2.36
PUM3-204ENST00000490444 DNAH8Q96JB1 4490 aa0.3□□□□□ -2.36
PUM3-204ENST00000490444 ANK3Q12955 4377 aaKnown RBP0.3□□□□□ -2.36
PUM3-204ENST00000490444 LINC01556Q5JQF7 62 aa0.3□□□□□ -2.36
PUM3-204ENST00000490444 Q9Y3F1 56 aa0.3□□□□□ -2.36
PUM3-204ENST00000490444 MUC5ACP98088 5654 aa0.3□□□□□ -2.36
PUM3-204ENST00000490444 PKD1P98161 4303 aa0.29□□□□□ -2.36
PUM3-204ENST00000490444 DNAH2Q9P225 4427 aa0.28□□□□□ -2.36
PUM3-204ENST00000490444 SMG1Q96Q15 3661 aaKnown RBP0.28□□□□□ -2.36
PUM3-204ENST00000490444 AKAP9Q99996 3911 aa0.28□□□□□ -2.36
PUM3-204ENST00000490444 CFAP46Q8IYW2 2715 aa0.27□□□□□ -2.37
PUM3-204ENST00000490444 LPAP08519 4548 aa0.26□□□□□ -2.37
PUM3-204ENST00000490444 CSMD2Q7Z408 3487 aa0.26□□□□□ -2.37
PUM3-204ENST00000490444 NBEAL1Q6ZS30 2694 aa0.26□□□□□ -2.37
PUM3-204ENST00000490444 SZT2Q5T011 3432 aa0.26□□□□□ -2.37
PUM3-204ENST00000490444 MT1EP04732 61 aa0.26□□□□□ -2.37
PUM3-204ENST00000490444 MT1HP80294 61 aa0.26□□□□□ -2.37
PUM3-204ENST00000490444 COX14Q96I36 57 aa0.26□□□□□ -2.37
PUM3-204ENST00000490444 DOPEY1Q5JWR5 2465 aa0.26□□□□□ -2.37
PUM3-204ENST00000490444 MKI67P46013 3256 aaKnown RBP0.26□□□□□ -2.37
PUM3-204ENST00000490444 DNAH6Q9C0G6 4158 aa0.26□□□□□ -2.37
PUM3-204ENST00000490444 ITPR2Q14571 2701 aa0.25□□□□□ -2.37
PUM3-204ENST00000490444 SPTAN1Q13813 2472 aaKnown RBP0.25□□□□□ -2.37
PUM3-204ENST00000490444 PHGR1C9JFL3 82 aa0.25□□□□□ -2.37
PUM3-204ENST00000490444 DEFB4AO15263 64 aa0.25□□□□□ -2.37
PUM3-204ENST00000490444 SRCAPQ6ZRS2 3230 aa0.25□□□□□ -2.37
PUM3-204ENST00000490444 DNAH7Q8WXX0 4024 aa0.24□□□□□ -2.37
PUM3-204ENST00000490444 DCHS1Q96JQ0 3298 aa0.24□□□□□ -2.37
PUM3-204ENST00000490444 BOD1L1Q8NFC6 3051 aa0.24□□□□□ -2.37
PUM3-204ENST00000490444 XIRP2A4UGR9 3374 aa0.24□□□□□ -2.37
PUM3-204ENST00000490444 MT1LQ93083 61 aa0.23□□□□□ -2.37
PUM3-204ENST00000490444 FREM2Q5SZK8 3169 aa0.23□□□□□ -2.37
PUM3-204ENST00000490444 MUC3AQ02505 3323 aa0.22□□□□□ -2.37
PUM3-204ENST00000490444 STAB2Q8WWQ8 2551 aa0.22□□□□□ -2.37
PUM3-204ENST00000490444 APOBP04114 4563 aaKnown RBP0.22□□□□□ -2.37
PUM3-204ENST00000490444 DNAH9Q9NYC9 4486 aa0.22□□□□□ -2.37
PUM3-204ENST00000490444 FAT4Q6V0I7 4981 aa0.22□□□□□ -2.37
PUM3-204ENST00000490444 DNAH1Q9P2D7 4330 aa0.22□□□□□ -2.37
PUM3-204ENST00000490444 FAT3Q8TDW7 4589 aa0.21□□□□□ -2.38
PUM3-204ENST00000490444 HTN3P15516 51 aa0.21□□□□□ -2.38
PUM3-204ENST00000490444 LRP1BQ9NZR2 4599 aa0.21□□□□□ -2.38
PUM3-204ENST00000490444 HMCN2Q8NDA2 5059 aa0.21□□□□□ -2.38
PUM3-204ENST00000490444 DMDP11532 3685 aa0.21□□□□□ -2.38
PUM3-204ENST00000490444 FAT1Q14517 4588 aa0.2□□□□□ -2.38
PUM3-204ENST00000490444 CEP295Q9C0D2 2601 aa0.2□□□□□ -2.38
PUM3-204ENST00000490444 CMYA5Q8N3K9 4069 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms