RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 BSNQ9UPA5 3926 aa0.74□□□□□ -2.29
RBM28-207ENST00000488249 VPS13AQ96RL7 3174 aa0.74□□□□□ -2.29
RBM28-207ENST00000488249 CFAP54Q96N23 3096 aa0.74□□□□□ -2.29
RBM28-207ENST00000488249 PDZD2O15018 2839 aa0.74□□□□□ -2.29
RBM28-207ENST00000488249 MGAM2Q2M2H8 2515 aa0.73□□□□□ -2.29
RBM28-207ENST00000488249 CENPEQ02224 2701 aa0.73□□□□□ -2.29
RBM28-207ENST00000488249 TEX15Q9BXT5 2789 aa0.73□□□□□ -2.29
RBM28-207ENST00000488249 TACC2O95359 2948 aa0.72□□□□□ -2.29
RBM28-207ENST00000488249 OTOGQ6ZRI0 2925 aa0.72□□□□□ -2.29
RBM28-207ENST00000488249 PRKDCP78527 4128 aaKnown RBP0.72□□□□□ -2.29
RBM28-207ENST00000488249 LRBAP50851 2863 aa0.72□□□□□ -2.29
RBM28-207ENST00000488249 UBR4Q5T4S7 5183 aa0.72□□□□□ -2.29
RBM28-207ENST00000488249 VPS13DQ5THJ4 4388 aa0.72□□□□□ -2.29
RBM28-207ENST00000488249 DNAH14Q0VDD8 3507 aa0.72□□□□□ -2.29
RBM28-207ENST00000488249 FRAS1Q86XX4 4008 aa0.72□□□□□ -2.29
RBM28-207ENST00000488249 PRM1P04553 51 aa0.71□□□□□ -2.3
RBM28-207ENST00000488249 KRTAP19-3Q7Z4W3 81 aa0.71□□□□□ -2.3
RBM28-207ENST00000488249 LAMA2P24043 3122 aaKnown RBP0.71□□□□□ -2.3
RBM28-207ENST00000488249 USP34Q70CQ2 3546 aa0.71□□□□□ -2.3
RBM28-207ENST00000488249 TENM3Q9P273 2699 aa0.71□□□□□ -2.3
RBM28-207ENST00000488249 APCP25054 2843 aa0.7□□□□□ -2.3
RBM28-207ENST00000488249 SZT2Q5T011 3432 aa0.7□□□□□ -2.3
RBM28-207ENST00000488249 NBPF19A0A087WUL8 3843 aa0.7□□□□□ -2.3
RBM28-207ENST00000488249 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
RBM28-207ENST00000488249 HTTP42858 3142 aa0.7□□□□□ -2.3
RBM28-207ENST00000488249 UNC80Q8N2C7 3258 aa0.7□□□□□ -2.3
RBM28-207ENST00000488249 LYSTQ99698 3801 aa0.7□□□□□ -2.3
RBM28-207ENST00000488249 STAB2Q8WWQ8 2551 aa0.69□□□□□ -2.3
RBM28-207ENST00000488249 VCANP13611 3396 aa0.69□□□□□ -2.3
RBM28-207ENST00000488249 NF1P21359 2839 aa0.69□□□□□ -2.3
RBM28-207ENST00000488249 SPTBN5Q9NRC6 3674 aaKnown RBP0.69□□□□□ -2.3
RBM28-207ENST00000488249 KRTAP5-10Q6L8G5 202 aa0.69□□□□□ -2.3
RBM28-207ENST00000488249 AHNAK2Q8IVF2 5795 aa0.69□□□□□ -2.3
RBM28-207ENST00000488249 ZNF469Q96JG9 3925 aaPredicted RBP0.69□□□□□ -2.3
RBM28-207ENST00000488249 DMXL1Q9Y485 3027 aa0.69□□□□□ -2.3
RBM28-207ENST00000488249 FAT2Q9NYQ8 4349 aa0.69□□□□□ -2.3
RBM28-207ENST00000488249 CFAP47Q6ZTR5 3102 aa0.69□□□□□ -2.3
RBM28-207ENST00000488249 MKI67P46013 3256 aaKnown RBP0.69□□□□□ -2.3
RBM28-207ENST00000488249 LAMA1P25391 3075 aa0.68□□□□□ -2.3
RBM28-207ENST00000488249 FREM2Q5SZK8 3169 aa0.68□□□□□ -2.3
RBM28-207ENST00000488249 ZFHX4Q86UP3 3567 aa0.68□□□□□ -2.3
RBM28-207ENST00000488249 SACSQ9NZJ4 4579 aa0.68□□□□□ -2.3
RBM28-207ENST00000488249 PKHD1L1Q86WI1 4243 aa0.68□□□□□ -2.3
RBM28-207ENST00000488249 DMXL2Q8TDJ6 3036 aa0.68□□□□□ -2.3
RBM28-207ENST00000488249 VPS13BQ7Z7G8 4022 aa0.68□□□□□ -2.3
RBM28-207ENST00000488249 ADGRG4Q8IZF6 3080 aa0.68□□□□□ -2.3
RBM28-207ENST00000488249 KMT2AQ03164 3969 aa0.67□□□□□ -2.3
RBM28-207ENST00000488249 XIRP2A4UGR9 3374 aa0.67□□□□□ -2.3
RBM28-207ENST00000488249 DNAH8Q96JB1 4490 aa0.67□□□□□ -2.3
RBM28-207ENST00000488249 COL12A1Q99715 3063 aa0.67□□□□□ -2.3
RBM28-207ENST00000488249 TGP01266 2768 aa0.67□□□□□ -2.3
RBM28-207ENST00000488249 C5orf42Q9H799 3197 aa0.67□□□□□ -2.3
RBM28-207ENST00000488249 KIAA1109Q2LD37 5005 aa0.67□□□□□ -2.3
RBM28-207ENST00000488249 DCHS1Q96JQ0 3298 aa0.67□□□□□ -2.3
RBM28-207ENST00000488249 DCHS2Q6V1P9 2916 aa0.67□□□□□ -2.3
RBM28-207ENST00000488249 DMDP11532 3685 aa0.67□□□□□ -2.3
RBM28-207ENST00000488249 WDFY3Q8IZQ1 3526 aa0.67□□□□□ -2.3
RBM28-207ENST00000488249 CRYBG3Q68DQ2 2970 aa0.66□□□□□ -2.3
RBM28-207ENST00000488249 NIPBLQ6KC79 2804 aaeCLIP0.66□□□□□ -2.3
RBM28-207ENST00000488249 CELSR3Q9NYQ7 3312 aa0.66□□□□□ -2.3
RBM28-207ENST00000488249 BOD1L1Q8NFC6 3051 aa0.66□□□□□ -2.3
RBM28-207ENST00000488249 SPENQ96T58 3664 aaKnown RBP0.65□□□□□ -2.31
RBM28-207ENST00000488249 SPEGQ15772 3267 aa0.65□□□□□ -2.31
RBM28-207ENST00000488249 MXRA5Q9NR99 2828 aa0.65□□□□□ -2.31
RBM28-207ENST00000488249 CSMD1Q96PZ7 3565 aa0.65□□□□□ -2.31
RBM28-207ENST00000488249 ATMQ13315 3056 aa0.65□□□□□ -2.31
RBM28-207ENST00000488249 AKAP9Q99996 3911 aa0.65□□□□□ -2.31
RBM28-207ENST00000488249 PCLOQ9Y6V0 5065 aa0.64□□□□□ -2.31
RBM28-207ENST00000488249 CDH23Q9H251 3354 aa0.64□□□□□ -2.31
RBM28-207ENST00000488249 MACF1Q9UPN3 7388 aaKnown RBP0.64□□□□□ -2.31
RBM28-207ENST00000488249 KRTAP8-1Q8IUC2 63 aa0.64□□□□□ -2.31
RBM28-207ENST00000488249 SMG1Q96Q15 3661 aaKnown RBP0.64□□□□□ -2.31
RBM28-207ENST00000488249 BRCA2P51587 3418 aa0.64□□□□□ -2.31
RBM28-207ENST00000488249 ITPR2Q14571 2701 aa0.64□□□□□ -2.31
RBM28-207ENST00000488249 MUC2Q02817 5179 aa0.64□□□□□ -2.31
RBM28-207ENST00000488249 HIVEP1P15822 2718 aa0.63□□□□□ -2.31
RBM28-207ENST00000488249 LAMA3Q16787 3333 aa0.63□□□□□ -2.31
RBM28-207ENST00000488249 LAMA5O15230 3695 aa0.63□□□□□ -2.31
RBM28-207ENST00000488249 EYSQ5T1H1 3165 aa0.63□□□□□ -2.31
RBM28-207ENST00000488249 ZANQ9Y493 2812 aa0.62□□□□□ -2.31
RBM28-207ENST00000488249 HRNRQ86YZ3 2850 aaPredicted RBP0.62□□□□□ -2.31
RBM28-207ENST00000488249 COL7A1Q02388 2944 aa0.61□□□□□ -2.31
RBM28-207ENST00000488249 RYR1P21817 5038 aa0.61□□□□□ -2.31
RBM28-207ENST00000488249 SVEP1Q4LDE5 3571 aa0.61□□□□□ -2.31
RBM28-207ENST00000488249 DNAH10Q8IVF4 4471 aa0.61□□□□□ -2.31
RBM28-207ENST00000488249 LOC400499M0QZD8 3231 aa0.61□□□□□ -2.31
RBM28-207ENST00000488249 AHNAKQ09666 5890 aaKnown RBP0.61□□□□□ -2.31
RBM28-207ENST00000488249 HSPG2P98160 4391 aa0.61□□□□□ -2.31
RBM28-207ENST00000488249 DNAH3Q8TD57 4116 aa0.61□□□□□ -2.31
RBM28-207ENST00000488249 ASPMQ8IZT6 3477 aa0.61□□□□□ -2.31
RBM28-207ENST00000488249 MYO15AQ9UKN7 3530 aa0.6□□□□□ -2.31
RBM28-207ENST00000488249 DNAH2Q9P225 4427 aa0.6□□□□□ -2.31
RBM28-207ENST00000488249 HUWE1Q7Z6Z7 4374 aaKnown RBP0.6□□□□□ -2.31
RBM28-207ENST00000488249 APOBP04114 4563 aaKnown RBP0.6□□□□□ -2.31
RBM28-207ENST00000488249 HECTD4Q9Y4D8 3996 aa0.6□□□□□ -2.31
RBM28-207ENST00000488249 TRRAPQ9Y4A5 3859 aa0.6□□□□□ -2.31
RBM28-207ENST00000488249 DNAH7Q8WXX0 4024 aa0.6□□□□□ -2.31
RBM28-207ENST00000488249 DNAH17Q9UFH2 4485 aa0.6□□□□□ -2.31
RBM28-207ENST00000488249 CUBNO60494 3623 aa0.59□□□□□ -2.31
RBM28-207ENST00000488249 DNAH9Q9NYC9 4486 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms