RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 AEBP2Q6ZN18 517 aaPredicted RBP17.44■□□□□ 0.38
RBM28-207ENST00000488249 CHIC1Q5VXU3 224 aa17.04■□□□□ 0.32
RBM28-207ENST00000488249 PHF23Q9BUL5 403 aaPredicted RBP14.99□□□□□ -0.01
RBM28-207ENST00000488249 SENP3Q9H4L4 574 aaPredicted RBP14.8□□□□□ -0.04
RBM28-207ENST00000488249 PLPPR3Q6T4P5 718 aa13.84□□□□□ -0.19
RBM28-207ENST00000488249 FOXD1Q16676 465 aa13.74□□□□□ -0.21
RBM28-207ENST00000488249 PPP6R1Q9UPN7 881 aa13.22□□□□□ -0.29
RBM28-207ENST00000488249 ADRA2BP18089 450 aa13.21□□□□□ -0.29
RBM28-207ENST00000488249 PIAS4Q8N2W9 510 aaPredicted RBP12.95□□□□□ -0.34
RBM28-207ENST00000488249 POTEDQ86YR6 584 aa12.69□□□□□ -0.38
RBM28-207ENST00000488249 MSH5O43196 834 aa12.67□□□□□ -0.38
RBM28-207ENST00000488249 PPP4R3CPQ6ZMV5 832 aa12.2□□□□□ -0.46
RBM28-207ENST00000488249 SCAF1Q9H7N4 1312 aaKnown RBP12.09□□□□□ -0.47
RBM28-207ENST00000488249 MAPK8IP2Q13387 824 aaPredicted RBP11.99□□□□□ -0.49
RBM28-207ENST00000488249 KCNA4P22459 653 aa11.91□□□□□ -0.5
RBM28-207ENST00000488249 NCBP3Q53F19 620 aaKnown RBP11.88□□□□□ -0.51
RBM28-207ENST00000488249 CNKSR2Q8WXI2 1034 aa11.86□□□□□ -0.51
RBM28-207ENST00000488249 DMRT2Q9Y5R5 561 aa11.82□□□□□ -0.52
RBM28-207ENST00000488249 NPM3O75607 178 aaKnown RBP11.7□□□□□ -0.54
RBM28-207ENST00000488249 RNF216Q9NWF9 866 aaPredicted RBP11.63□□□□□ -0.55
RBM28-207ENST00000488249 HOXD11P31277 338 aaPredicted RBP11.58□□□□□ -0.56
RBM28-207ENST00000488249 DNAJC5BQ9UF47 199 aa11.37□□□□□ -0.59
RBM28-207ENST00000488249 SLC4A1APQ9BWU0 796 aaKnown RBP11.35□□□□□ -0.59
RBM28-207ENST00000488249 DCAF8L1A6NGE4 600 aa11.3□□□□□ -0.6
RBM28-207ENST00000488249 SLC4A2P04920 1241 aa11.05□□□□□ -0.64
RBM28-207ENST00000488249 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.03□□□□□ -0.642e-7■□□□□ 9.6
RBM28-207ENST00000488249 EHMT2Q96KQ7 1210 aa11.02□□□□□ -0.65
RBM28-207ENST00000488249 FOXD4L1Q9NU39 408 aa10.97□□□□□ -0.65
RBM28-207ENST00000488249 ZBTB22O15209 634 aa10.96□□□□□ -0.65
RBM28-207ENST00000488249 CSRNP3Q8WYN3 585 aa10.91□□□□□ -0.66
RBM28-207ENST00000488249 RNF39Q9H2S5 420 aa10.85□□□□□ -0.67
RBM28-207ENST00000488249 U3KPZ7 1027 aaPredicted RBP10.85□□□□□ -0.67
RBM28-207ENST00000488249 MYCNP04198 464 aaPredicted RBP10.81□□□□□ -0.68
RBM28-207ENST00000488249 C1QBPQ07021 282 aaKnown RBP10.73□□□□□ -0.69
RBM28-207ENST00000488249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.72□□□□□ -0.69
RBM28-207ENST00000488249 HNRNPUL2Q1KMD3 747 aaKnown RBP10.72□□□□□ -0.69
RBM28-207ENST00000488249 SAMD1Q6SPF0 538 aaPredicted RBP10.68□□□□□ -0.7
RBM28-207ENST00000488249 CACNB1Q02641 598 aaPredicted RBP10.66□□□□□ -0.7
RBM28-207ENST00000488249 APLP2Q06481 763 aa10.61□□□□□ -0.71
RBM28-207ENST00000488249 ATXN8OSP0DMR3 200 aa10.59□□□□□ -0.71
RBM28-207ENST00000488249 SPINK5Q9NQ38 1064 aaPredicted RBP10.55□□□□□ -0.72
RBM28-207ENST00000488249 ATF5Q9Y2D1 282 aaPredicted RBP10.52□□□□□ -0.73
RBM28-207ENST00000488249 CAPN15O75808 1086 aa10.51□□□□□ -0.73
RBM28-207ENST00000488249 ZNF219Q9P2Y4 722 aaPredicted RBP10.46□□□□□ -0.73
RBM28-207ENST00000488249 TRHP20396 242 aaPredicted RBP10.45□□□□□ -0.74
RBM28-207ENST00000488249 DSG3P32926 999 aa10.33□□□□□ -0.76
RBM28-207ENST00000488249 ABCB7O75027 752 aa10.3□□□□□ -0.76
RBM28-207ENST00000488249 POLA2Q14181 598 aa10.29□□□□□ -0.76
RBM28-207ENST00000488249 ZBTB12Q9Y330 459 aaPredicted RBP10.12□□□□□ -0.79
RBM28-207ENST00000488249 FBLN2P98095 1184 aa10.08□□□□□ -0.8
RBM28-207ENST00000488249 MKRN4PQ13434 485 aaPredicted RBP10.07□□□□□ -0.8
RBM28-207ENST00000488249 OSCARQ8IYS5 282 aa9.93□□□□□ -0.82
RBM28-207ENST00000488249 FKBP8Q14318 412 aa9.86□□□□□ -0.83
RBM28-207ENST00000488249 SPDYE2BA6NHP3 402 aa9.85□□□□□ -0.83
RBM28-207ENST00000488249 SPDYE4A6NLX3 237 aa9.85□□□□□ -0.83
RBM28-207ENST00000488249 SPDYE6P0CI01 402 aa9.85□□□□□ -0.83
RBM28-207ENST00000488249 SPDYE2Q495Y8 402 aa9.85□□□□□ -0.83
RBM28-207ENST00000488249 RBM42Q9BTD8 480 aaKnown RBP9.84□□□□□ -0.83
RBM28-207ENST00000488249 ZNF692Q9BU19 519 aaPredicted RBP9.82□□□□□ -0.84
RBM28-207ENST00000488249 POTEHQ6S545 545 aa9.81□□□□□ -0.84
RBM28-207ENST00000488249 SSUH2Q9Y2M2 353 aa9.77□□□□□ -0.85
RBM28-207ENST00000488249 AKT1S1Q96B36 256 aa9.73□□□□□ -0.85
RBM28-207ENST00000488249 PROM2Q8N271 834 aa9.69□□□□□ -0.86
RBM28-207ENST00000488249 PABPN1Q86U42 306 aaKnown RBP eCLIP9.68□□□□□ -0.86
RBM28-207ENST00000488249 REM2Q8IYK8 340 aaPredicted RBP9.63□□□□□ -0.87
RBM28-207ENST00000488249 SPDYE1Q8NFV5 336 aaPredicted RBP9.56□□□□□ -0.88
RBM28-207ENST00000488249 STAG3Q9UJ98 1225 aa9.53□□□□□ -0.88
RBM28-207ENST00000488249 PITPNM1O00562 1244 aa9.52□□□□□ -0.89
RBM28-207ENST00000488249 FBXO3Q9UK99 471 aa9.51□□□□□ -0.89
RBM28-207ENST00000488249 CLEC11AQ9Y240 323 aa9.51□□□□□ -0.89
RBM28-207ENST00000488249 PRR29P0C7W0 189 aa9.44□□□□□ -0.9
RBM28-207ENST00000488249 CHRDL2Q6WN34 429 aa9.43□□□□□ -0.9
RBM28-207ENST00000488249 VASPP50552 380 aaPredicted RBP9.37□□□□□ -0.91
RBM28-207ENST00000488249 FXR2P51116 673 aaKnown RBP eCLIP9.35□□□□□ -0.91
RBM28-207ENST00000488249 MIER1Q8N108 512 aa9.34□□□□□ -0.91
RBM28-207ENST00000488249 PLCD3Q8N3E9 789 aa9.32□□□□□ -0.92
RBM28-207ENST00000488249 PIP4P2Q8N4L2 257 aa9.32□□□□□ -0.92
RBM28-207ENST00000488249 CREBZFQ9NS37 354 aa9.31□□□□□ -0.92
RBM28-207ENST00000488249 PLEKHG5O94827 1062 aa9.29□□□□□ -0.92
RBM28-207ENST00000488249 PRKAR2AP13861 404 aaKnown RBP9.28□□□□□ -0.92
RBM28-207ENST00000488249 CHADLQ6NUI6 762 aa9.28□□□□□ -0.92
RBM28-207ENST00000488249 IFNLR1Q8IU57 520 aaPredicted RBP9.25□□□□□ -0.93
RBM28-207ENST00000488249 KLHL34Q8N239 644 aa9.22□□□□□ -0.93
RBM28-207ENST00000488249 ZBTB47Q9UFB7 747 aaPredicted RBP9.22□□□□□ -0.93
RBM28-207ENST00000488249 MNX1P50219 401 aaPredicted RBP9.21□□□□□ -0.94
RBM28-207ENST00000488249 FARP1Q9Y4F1 1045 aaPredicted RBP9.2□□□□□ -0.94
RBM28-207ENST00000488249 NPM1P06748 294 aaKnown RBP eCLIP9.16□□□□□ -0.94
RBM28-207ENST00000488249 SPOCK2Q92563 424 aa9.14□□□□□ -0.95
RBM28-207ENST00000488249 NUBP1P53384 320 aa9.1□□□□□ -0.95
RBM28-207ENST00000488249 RASEFQ8IZ41 740 aa9.05□□□□□ -0.96
RBM28-207ENST00000488249 FAM212AQ96EL1 285 aa9.03□□□□□ -0.96
RBM28-207ENST00000488249 C19orf67A6NJJ6 358 aa9.02□□□□□ -0.97
RBM28-207ENST00000488249 HAX1O00165 279 aa9.01□□□□□ -0.97
RBM28-207ENST00000488249 CD44P16070 742 aaKnown RBP9.01□□□□□ -0.97
RBM28-207ENST00000488249 DCAF8Q5TAQ9 597 aa9.01□□□□□ -0.97
RBM28-207ENST00000488249 TSPYL2Q9H2G4 693 aaPredicted RBP9.01□□□□□ -0.97
RBM28-207ENST00000488249 PAK3O75914 559 aaPredicted RBP9□□□□□ -0.97
RBM28-207ENST00000488249 GSE1Q14687 1217 aa9□□□□□ -0.97
RBM28-207ENST00000488249 AMER1Q5JTC6 1135 aaPredicted RBP8.99□□□□□ -0.97
RBM28-207ENST00000488249 CIZ1Q9ULV3 898 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms