RNA–Protein interactions for RNA: ENST00000478909.5

CMSS1-203, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-203ENST00000478909 C7orf65Q6ZTY9 151 aa3.39□□□□□ -1.87
CMSS1-203ENST00000478909 C20orf166-AS1Q96NR2 134 aa3.39□□□□□ -1.87
CMSS1-203ENST00000478909 A8MUU9 505 aa3.38□□□□□ -1.87
CMSS1-203ENST00000478909 HRES1P13985 223 aa3.38□□□□□ -1.87
CMSS1-203ENST00000478909 LINC01558Q9Y6Z2 57 aa3.38□□□□□ -1.87
CMSS1-203ENST00000478909 KRTAP10-5P60370 271 aa3.37□□□□□ -1.87
CMSS1-203ENST00000478909 PKHD1L1Q86WI1 4243 aa3.36□□□□□ -1.87
CMSS1-203ENST00000478909 CHKB-CPT1BH3BT56 60 aa3.36□□□□□ -1.87
CMSS1-203ENST00000478909 SMR3BP02814 79 aaPredicted RBP3.36□□□□□ -1.87
CMSS1-203ENST00000478909 PRR15LQ9BU68 103 aa3.36□□□□□ -1.87
CMSS1-203ENST00000478909 APOBP04114 4563 aaKnown RBP3.36□□□□□ -1.87
CMSS1-203ENST00000478909 Q5VV11 94 aa3.35□□□□□ -1.87
CMSS1-203ENST00000478909 SPTSSBQ8NFR3 76 aa3.35□□□□□ -1.87
CMSS1-203ENST00000478909 BRK1Q8WUW1 75 aa3.35□□□□□ -1.87
CMSS1-203ENST00000478909 RYR2Q92736 4967 aa3.33□□□□□ -1.88
CMSS1-203ENST00000478909 PSPHP1O15172 72 aa3.33□□□□□ -1.88
CMSS1-203ENST00000478909 FLG2Q5D862 2391 aaPredicted RBP3.32□□□□□ -1.88
CMSS1-203ENST00000478909 KRTAP10-8P60410 259 aa3.32□□□□□ -1.88
CMSS1-203ENST00000478909 Q5VSD8 79 aa3.32□□□□□ -1.88
CMSS1-203ENST00000478909 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
CMSS1-203ENST00000478909 CDC42SE1Q9NRR8 79 aa3.3□□□□□ -1.88
CMSS1-203ENST00000478909 FAT1Q14517 4588 aa3.29□□□□□ -1.88
CMSS1-203ENST00000478909 A6NED7 52 aa3.29□□□□□ -1.88
CMSS1-203ENST00000478909 ATP11AUNQ6ZP68 121 aa3.29□□□□□ -1.88
CMSS1-203ENST00000478909 KRTAP10-12P60413 245 aa3.28□□□□□ -1.88
CMSS1-203ENST00000478909 KMT2CQ8NEZ4 4911 aaKnown RBP3.28□□□□□ -1.88
CMSS1-203ENST00000478909 A0A1B0GU69 56 aa3.27□□□□□ -1.89
CMSS1-203ENST00000478909 RETNLBQ9BQ08 111 aa3.27□□□□□ -1.89
CMSS1-203ENST00000478909 SEC61GP60059 68 aa3.26□□□□□ -1.89
CMSS1-203ENST00000478909 C9orf92A6NGG3 77 aa3.25□□□□□ -1.89
CMSS1-203ENST00000478909 SPINK7P58062 85 aa3.25□□□□□ -1.89
CMSS1-203ENST00000478909 RPL37P61927 97 aaKnown RBP3.25□□□□□ -1.89
CMSS1-203ENST00000478909 UQCR11O14957 56 aa3.24□□□□□ -1.89
CMSS1-203ENST00000478909 COX6B2Q6YFQ2 88 aa3.24□□□□□ -1.89
CMSS1-203ENST00000478909 DMBT1Q9UGM3 2413 aaPredicted RBP3.22□□□□□ -1.89
CMSS1-203ENST00000478909 TPRXLQ17RH7 258 aa3.22□□□□□ -1.89
CMSS1-203ENST00000478909 HSPG2P98160 4391 aa3.22□□□□□ -1.89
CMSS1-203ENST00000478909 KRTAP9-6A8MVA2 160 aa3.21□□□□□ -1.9
CMSS1-203ENST00000478909 LCA10Q71F78 164 aa3.21□□□□□ -1.9
CMSS1-203ENST00000478909 TNXBP22105 4242 aa3.21□□□□□ -1.9
CMSS1-203ENST00000478909 PMAIP1Q13794 54 aa3.2□□□□□ -1.9
CMSS1-203ENST00000478909 SPATA8Q6RVD6 105 aa3.2□□□□□ -1.9
CMSS1-203ENST00000478909 RYR1P21817 5038 aa3.2□□□□□ -1.9
CMSS1-203ENST00000478909 FAT3Q8TDW7 4589 aa3.19□□□□□ -1.9
CMSS1-203ENST00000478909 MT1HL1P0DM35 61 aa3.19□□□□□ -1.9
CMSS1-203ENST00000478909 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
CMSS1-203ENST00000478909 MIR22HGQ0VDD5 57 aa3.17□□□□□ -1.9
CMSS1-203ENST00000478909 A6NN06 94 aa3.16□□□□□ -1.9
CMSS1-203ENST00000478909 KTN1-AS1Q86SY8 53 aa3.16□□□□□ -1.9
CMSS1-203ENST00000478909 RYR3Q15413 4870 aa3.15□□□□□ -1.9
CMSS1-203ENST00000478909 LRP1Q07954 4544 aaKnown RBP3.15□□□□□ -1.91
CMSS1-203ENST00000478909 RBM12B-AS1Q9P1G2 102 aa3.14□□□□□ -1.91
CMSS1-203ENST00000478909 KIAA1109Q2LD37 5005 aa3.13□□□□□ -1.91
CMSS1-203ENST00000478909 A0A1B0GU33 70 aa3.12□□□□□ -1.91
CMSS1-203ENST00000478909 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
CMSS1-203ENST00000478909 H1FX-AS1Q4G0G2 97 aa3.11□□□□□ -1.91
CMSS1-203ENST00000478909 S4R3F8 94 aa3.11□□□□□ -1.91
CMSS1-203ENST00000478909 A8MU10 97 aa3.1□□□□□ -1.91
CMSS1-203ENST00000478909 PRAC1Q96KF2 57 aa3.1□□□□□ -1.91
CMSS1-203ENST00000478909 MYCBP2O75592 4640 aa3.1□□□□□ -1.91
CMSS1-203ENST00000478909 K7ERS5 55 aa3.09□□□□□ -1.91
CMSS1-203ENST00000478909 H0YAA0 97 aa3.07□□□□□ -1.92
CMSS1-203ENST00000478909 CSAG1Q6PB30 78 aa3.05□□□□□ -1.92
CMSS1-203ENST00000478909 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
CMSS1-203ENST00000478909 KRTAP5-4Q6L8H1 288 aa3.04□□□□□ -1.92
CMSS1-203ENST00000478909 EPPK1P58107 5090 aaKnown RBP3.03□□□□□ -1.92
CMSS1-203ENST00000478909 NDUFAF8A1L188 74 aa3.02□□□□□ -1.93
CMSS1-203ENST00000478909 M0QZ58 72 aa3.01□□□□□ -1.93
CMSS1-203ENST00000478909 LRP2P98164 4655 aa2.96□□□□□ -1.94
CMSS1-203ENST00000478909 KRTAP5-9P26371 169 aa2.96□□□□□ -1.94
CMSS1-203ENST00000478909 ADM2Q7Z4H4 148 aa2.96□□□□□ -1.94
CMSS1-203ENST00000478909 HERC2O95714 4834 aa2.94□□□□□ -1.94
CMSS1-203ENST00000478909 ROMO1P60602 79 aa2.93□□□□□ -1.94
CMSS1-203ENST00000478909 P0C880 135 aa2.92□□□□□ -1.94
CMSS1-203ENST00000478909 ABCA13Q86UQ4 5058 aa2.92□□□□□ -1.94
CMSS1-203ENST00000478909 BIRC6Q9NR09 4857 aa2.92□□□□□ -1.94
CMSS1-203ENST00000478909 MUC17Q685J3 4493 aa2.91□□□□□ -1.94
CMSS1-203ENST00000478909 KRTAP13-4Q3LI77 160 aa2.9□□□□□ -1.95
CMSS1-203ENST00000478909 CRIPTQ9P021 101 aa2.9□□□□□ -1.95
CMSS1-203ENST00000478909 R4GN34 69 aa2.89□□□□□ -1.95
CMSS1-203ENST00000478909 KRTAP25-1Q3LHN0 102 aa2.88□□□□□ -1.95
CMSS1-203ENST00000478909 LINC01554Q52M75 96 aa2.88□□□□□ -1.95
CMSS1-203ENST00000478909 A0A0D9SG42 100 aa2.87□□□□□ -1.95
CMSS1-203ENST00000478909 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
CMSS1-203ENST00000478909 KRTAP12-1P59990 96 aa2.86□□□□□ -1.95
CMSS1-203ENST00000478909 KRTAP19-2Q3LHN2 52 aa2.86□□□□□ -1.95
CMSS1-203ENST00000478909 LPAP08519 4548 aa2.86□□□□□ -1.95
CMSS1-203ENST00000478909 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.95
CMSS1-203ENST00000478909 KRTAP4-1Q9BYQ7 146 aa2.84□□□□□ -1.95
CMSS1-203ENST00000478909 FLGP20930 4061 aaPredicted RBP2.83□□□□□ -1.96
CMSS1-203ENST00000478909 KRTAP12-2P59991 146 aa2.83□□□□□ -1.96
CMSS1-203ENST00000478909 SPINT4Q6UDR6 99 aa2.81□□□□□ -1.96
CMSS1-203ENST00000478909 HMCN2Q8NDA2 5059 aa2.79□□□□□ -1.96
CMSS1-203ENST00000478909 PCLOQ9Y6V0 5065 aa2.78□□□□□ -1.97
CMSS1-203ENST00000478909 HERC1Q15751 4861 aa2.75□□□□□ -1.97
CMSS1-203ENST00000478909 PP632Q6XCG6 107 aa2.74□□□□□ -1.97
CMSS1-203ENST00000478909 LCE3AQ5TA76 89 aa2.73□□□□□ -1.97
CMSS1-203ENST00000478909 CAMK2N1Q7Z7J9 78 aa2.72□□□□□ -1.97
CMSS1-203ENST00000478909 KRTAP4-3Q9BYR4 195 aa2.72□□□□□ -1.97
CMSS1-203ENST00000478909 SPRR2GQ9BYE4 73 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 2980.4 ms