Protein–RNA interactions for Protein: P60059

SEC61G, Protein transport protein Sec61 subunit gamma, humanhuman

Predictions only

Length 68 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61GP60059 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SEC61GP60059 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SEC61GP60059 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEC61GP60059 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SEC61GP60059 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEC61GP60059 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEC61GP60059 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEC61GP60059 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEC61GP60059 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SEC61GP60059 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
SEC61GP60059 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SEC61GP60059 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SEC61GP60059 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
SEC61GP60059 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.48■□□□□ 0.55
SEC61GP60059 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
SEC61GP60059 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC18.38■□□□□ 0.53
SEC61GP60059 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SEC61GP60059 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61GP60059 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SEC61GP60059 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SEC61GP60059 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.2■□□□□ 0.5
SEC61GP60059 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SEC61GP60059 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SEC61GP60059 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SEC61GP60059 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SEC61GP60059 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SEC61GP60059 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SEC61GP60059 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SEC61GP60059 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
SEC61GP60059 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SEC61GP60059 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SEC61GP60059 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SEC61GP60059 AL161658.1-201ENST00000623641 1967 ntBASIC17.73■□□□□ 0.43
SEC61GP60059 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEC61GP60059 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SEC61GP60059 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
SEC61GP60059 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEC61GP60059 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEC61GP60059 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SEC61GP60059 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEC61GP60059 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SEC61GP60059 AC139426.1-201ENST00000568218 2529 ntBASIC17.5■□□□□ 0.39
SEC61GP60059 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEC61GP60059 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SEC61GP60059 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEC61GP60059 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SEC61GP60059 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SEC61GP60059 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SEC61GP60059 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEC61GP60059 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEC61GP60059 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEC61GP60059 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SEC61GP60059 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SEC61GP60059 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
SEC61GP60059 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SEC61GP60059 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEC61GP60059 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEC61GP60059 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC61GP60059 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC17.19■□□□□ 0.34
SEC61GP60059 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC61GP60059 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SEC61GP60059 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SEC61GP60059 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SEC61GP60059 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SEC61GP60059 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEC61GP60059 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEC61GP60059 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEC61GP60059 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
SEC61GP60059 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SEC61GP60059 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SEC61GP60059 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SEC61GP60059 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SEC61GP60059 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SEC61GP60059 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SEC61GP60059 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC16.94■□□□□ 0.3
SEC61GP60059 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SEC61GP60059 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61GP60059 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SEC61GP60059 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEC61GP60059 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SEC61GP60059 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SEC61GP60059 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61GP60059 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC61GP60059 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SEC61GP60059 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEC61GP60059 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61GP60059 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SEC61GP60059 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SEC61GP60059 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SEC61GP60059 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SEC61GP60059 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SEC61GP60059 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SEC61GP60059 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SEC61GP60059 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
SEC61GP60059 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SEC61GP60059 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SEC61GP60059 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SEC61GP60059 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.64■□□□□ 0.25
SEC61GP60059 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC16.64■□□□□ 0.25
SEC61GP60059 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms