RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 LAMA1P25391 3075 aa0.82□□□□□ -2.28
XRN1-211ENST00000477237 PKHD1P08F94 4074 aa0.82□□□□□ -2.28
XRN1-211ENST00000477237 DMBT1Q9UGM3 2413 aaPredicted RBP0.81□□□□□ -2.28
XRN1-211ENST00000477237 A0A096LPF7 62 aa0.81□□□□□ -2.28
XRN1-211ENST00000477237 USP34Q70CQ2 3546 aa0.81□□□□□ -2.28
XRN1-211ENST00000477237 LOC400499M0QZD8 3231 aa0.8□□□□□ -2.28
XRN1-211ENST00000477237 LINC01556Q5JQF7 62 aa0.8□□□□□ -2.28
XRN1-211ENST00000477237 Q9Y3F1 56 aa0.8□□□□□ -2.28
XRN1-211ENST00000477237 TNXBP22105 4242 aa0.8□□□□□ -2.28
XRN1-211ENST00000477237 HIVEP3Q5T1R4 2406 aa0.8□□□□□ -2.28
XRN1-211ENST00000477237 CSMD1Q96PZ7 3565 aa0.8□□□□□ -2.28
XRN1-211ENST00000477237 LRP1Q07954 4544 aaKnown RBP0.8□□□□□ -2.28
XRN1-211ENST00000477237 USP24Q9UPU5 2620 aa0.8□□□□□ -2.28
XRN1-211ENST00000477237 TENM4Q6N022 2769 aa0.79□□□□□ -2.28
XRN1-211ENST00000477237 AHNAKQ09666 5890 aaKnown RBP0.79□□□□□ -2.28
XRN1-211ENST00000477237 XIRP2A4UGR9 3374 aa0.79□□□□□ -2.28
XRN1-211ENST00000477237 TACC2O95359 2948 aa0.79□□□□□ -2.28
XRN1-211ENST00000477237 FBN2P35556 2912 aa0.79□□□□□ -2.28
XRN1-211ENST00000477237 PTPN13Q12923 2485 aa0.79□□□□□ -2.28
XRN1-211ENST00000477237 ATRQ13535 2644 aa0.79□□□□□ -2.28
XRN1-211ENST00000477237 UNC80Q8N2C7 3258 aa0.79□□□□□ -2.28
XRN1-211ENST00000477237 H3BNG1 76 aa0.79□□□□□ -2.28
XRN1-211ENST00000477237 KRTAP2-3P0C7H8 128 aa0.79□□□□□ -2.28
XRN1-211ENST00000477237 KRTAP10-4P60372 401 aaPredicted RBP0.79□□□□□ -2.28
XRN1-211ENST00000477237 KRTAP2-4Q9BYR9 128 aa0.79□□□□□ -2.28
XRN1-211ENST00000477237 KRTAP2-1Q9BYU5 128 aa0.79□□□□□ -2.28
XRN1-211ENST00000477237 LPAP08519 4548 aa0.79□□□□□ -2.28
XRN1-211ENST00000477237 NCOR2Q9Y618 2525 aa0.79□□□□□ -2.28
XRN1-211ENST00000477237 BDP1A6H8Y1 2624 aa0.79□□□□□ -2.28
XRN1-211ENST00000477237 PIEZO1Q92508 2521 aa0.78□□□□□ -2.28
XRN1-211ENST00000477237 UTP20O75691 2785 aaKnown RBP0.78□□□□□ -2.28
XRN1-211ENST00000477237 TNP1P09430 55 aa0.78□□□□□ -2.28
XRN1-211ENST00000477237 LAMA3Q16787 3333 aa0.78□□□□□ -2.28
XRN1-211ENST00000477237 HELZ2Q9BYK8 2649 aaKnown RBP0.78□□□□□ -2.29
XRN1-211ENST00000477237 NBASA2RRP1 2371 aa0.77□□□□□ -2.29
XRN1-211ENST00000477237 RIF1Q5UIP0 2472 aaKnown RBP0.77□□□□□ -2.29
XRN1-211ENST00000477237 MUC17Q685J3 4493 aa0.77□□□□□ -2.29
XRN1-211ENST00000477237 FLNCQ14315 2725 aa0.77□□□□□ -2.29
XRN1-211ENST00000477237 CACNA1AO00555 2505 aa0.76□□□□□ -2.29
XRN1-211ENST00000477237 LRRK2Q5S007 2527 aa0.76□□□□□ -2.29
XRN1-211ENST00000477237 FAT1Q14517 4588 aa0.76□□□□□ -2.29
XRN1-211ENST00000477237 J3QKU1 62 aa0.76□□□□□ -2.29
XRN1-211ENST00000477237 DEFB135Q30KP9 77 aa0.76□□□□□ -2.29
XRN1-211ENST00000477237 ASPMQ8IZT6 3477 aa0.76□□□□□ -2.29
XRN1-211ENST00000477237 HIVEP1P15822 2718 aa0.76□□□□□ -2.29
XRN1-211ENST00000477237 GCN1Q92616 2671 aaKnown RBP0.76□□□□□ -2.29
XRN1-211ENST00000477237 EPG5Q9HCE0 2579 aa0.76□□□□□ -2.29
XRN1-211ENST00000477237 BRCA2P51587 3418 aa0.76□□□□□ -2.29
XRN1-211ENST00000477237 MXRA5Q9NR99 2828 aa0.75□□□□□ -2.29
XRN1-211ENST00000477237 ZANQ9Y493 2812 aa0.75□□□□□ -2.29
XRN1-211ENST00000477237 DEFB133Q30KQ1 61 aa0.75□□□□□ -2.29
XRN1-211ENST00000477237 CSMD2Q7Z408 3487 aa0.75□□□□□ -2.29
XRN1-211ENST00000477237 NBEAL2Q6ZNJ1 2754 aa0.74□□□□□ -2.29
XRN1-211ENST00000477237 ANKHD1Q8IWZ3 2542 aaKnown RBP0.74□□□□□ -2.29
XRN1-211ENST00000477237 ADGRG4Q8IZF6 3080 aa0.74□□□□□ -2.29
XRN1-211ENST00000477237 SPART-AS1P0CW21 52 aa0.74□□□□□ -2.29
XRN1-211ENST00000477237 ITPR2Q14571 2701 aa0.74□□□□□ -2.29
XRN1-211ENST00000477237 VCANP13611 3396 aa0.74□□□□□ -2.29
XRN1-211ENST00000477237 FAM186AA6NE01 2351 aa0.74□□□□□ -2.29
XRN1-211ENST00000477237 TGP01266 2768 aa0.74□□□□□ -2.29
XRN1-211ENST00000477237 NSD1Q96L73 2696 aaPredicted RBP0.73□□□□□ -2.29
XRN1-211ENST00000477237 SPG11Q96JI7 2443 aa0.73□□□□□ -2.29
XRN1-211ENST00000477237 TEX15Q9BXT5 2789 aa0.73□□□□□ -2.29
XRN1-211ENST00000477237 M0R2T5 61 aa0.73□□□□□ -2.29
XRN1-211ENST00000477237 SMR3AQ99954 134 aa0.73□□□□□ -2.29
XRN1-211ENST00000477237 CFAP46Q8IYW2 2715 aa0.73□□□□□ -2.29
XRN1-211ENST00000477237 SETXQ7Z333 2677 aaKnown RBP0.73□□□□□ -2.29
XRN1-211ENST00000477237 TENM3Q9P273 2699 aa0.72□□□□□ -2.29
XRN1-211ENST00000477237 TEP1Q99973 2627 aaKnown RBP0.72□□□□□ -2.29
XRN1-211ENST00000477237 WDFY3Q8IZQ1 3526 aa0.72□□□□□ -2.29
XRN1-211ENST00000477237 STAB1Q9NY15 2570 aa0.72□□□□□ -2.29
XRN1-211ENST00000477237 C9orf92A6NGG3 77 aa0.72□□□□□ -2.29
XRN1-211ENST00000477237 RPS29P62273 56 aaKnown RBP0.72□□□□□ -2.29
XRN1-211ENST00000477237 KRTAP8-1Q8IUC2 63 aa0.72□□□□□ -2.29
XRN1-211ENST00000477237 U3KQA8 63 aa0.72□□□□□ -2.29
XRN1-211ENST00000477237 VPS13CQ709C8 3753 aa0.72□□□□□ -2.29
XRN1-211ENST00000477237 HERC1Q15751 4861 aa0.72□□□□□ -2.29
XRN1-211ENST00000477237 USP9XQ93008 2570 aaPredicted RBP0.72□□□□□ -2.29
XRN1-211ENST00000477237 PKD1L1Q8TDX9 2849 aa0.72□□□□□ -2.29
XRN1-211ENST00000477237 SONP18583 2426 aaKnown RBP0.72□□□□□ -2.29
XRN1-211ENST00000477237 MYO15AQ9UKN7 3530 aa0.71□□□□□ -2.3
XRN1-211ENST00000477237 CUBNO60494 3623 aa0.71□□□□□ -2.3
XRN1-211ENST00000477237 STARD9Q9P2P6 4700 aa0.71□□□□□ -2.3
XRN1-211ENST00000477237 DNAH14Q0VDD8 3507 aa0.71□□□□□ -2.3
XRN1-211ENST00000477237 SVEP1Q4LDE5 3571 aa0.7□□□□□ -2.3
XRN1-211ENST00000477237 HRNRQ86YZ3 2850 aaPredicted RBP0.7□□□□□ -2.3
XRN1-211ENST00000477237 NBEAL1Q6ZS30 2694 aa0.7□□□□□ -2.3
XRN1-211ENST00000477237 CENPEQ02224 2701 aa0.7□□□□□ -2.3
XRN1-211ENST00000477237 ANKRD11Q6UB99 2663 aaPredicted RBP0.7□□□□□ -2.3
XRN1-211ENST00000477237 CHD8Q9HCK8 2581 aa0.69□□□□□ -2.3
XRN1-211ENST00000477237 LRP1BQ9NZR2 4599 aa0.69□□□□□ -2.3
XRN1-211ENST00000477237 HTN3P15516 51 aa0.68□□□□□ -2.3
XRN1-211ENST00000477237 LRP2P98164 4655 aa0.67□□□□□ -2.3
XRN1-211ENST00000477237 TLN1Q9Y490 2541 aaKnown RBP0.67□□□□□ -2.3
XRN1-211ENST00000477237 EYSQ5T1H1 3165 aa0.67□□□□□ -2.3
XRN1-211ENST00000477237 PRM1P04553 51 aa0.67□□□□□ -2.3
XRN1-211ENST00000477237 KRTAP21-3Q3LHN1 58 aa0.67□□□□□ -2.3
XRN1-211ENST00000477237 UNC79Q9P2D8 2635 aa0.66□□□□□ -2.3
XRN1-211ENST00000477237 ACANP16112 2415 aa0.66□□□□□ -2.3
XRN1-211ENST00000477237 STAB2Q8WWQ8 2551 aa0.65□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms