RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 PRO2289Q9P1D8 64 aa5.08□□□□□ -1.6
RRP1B-202ENST00000470886 KRTAP15-1Q3LI76 137 aa5.06□□□□□ -1.6
RRP1B-202ENST00000470886 SRRM2Q9UQ35 2752 aaKnown RBP5.06□□□□□ -1.6
RRP1B-202ENST00000470886 DNAH2Q9P225 4427 aa5.03□□□□□ -1.6
RRP1B-202ENST00000470886 FBN3Q75N90 2809 aa5.03□□□□□ -1.6
RRP1B-202ENST00000470886 INE1O15225 51 aa5.03□□□□□ -1.6
RRP1B-202ENST00000470886 KRTAP3-2Q9BYR7 98 aa5.02□□□□□ -1.61
RRP1B-202ENST00000470886 DNAH11Q96DT5 4516 aa5.01□□□□□ -1.61
RRP1B-202ENST00000470886 KRTAP3-3Q9BYR6 98 aa5.01□□□□□ -1.61
RRP1B-202ENST00000470886 STARD9Q9P2P6 4700 aa5.01□□□□□ -1.61
RRP1B-202ENST00000470886 MT1HL1P0DM35 61 aa4.96□□□□□ -1.62
RRP1B-202ENST00000470886 DNAH7Q8WXX0 4024 aa4.94□□□□□ -1.62
RRP1B-202ENST00000470886 KRTAP10-10P60014 251 aa4.94□□□□□ -1.62
RRP1B-202ENST00000470886 KRTAP23-1A1A580 65 aa4.93□□□□□ -1.62
RRP1B-202ENST00000470886 HECTD4Q9Y4D8 3996 aa4.91□□□□□ -1.62
RRP1B-202ENST00000470886 SACSQ9NZJ4 4579 aa4.9□□□□□ -1.62
RRP1B-202ENST00000470886 COL7A1Q02388 2944 aa4.88□□□□□ -1.63
RRP1B-202ENST00000470886 DNAH5Q8TE73 4624 aa4.88□□□□□ -1.63
RRP1B-202ENST00000470886 PRKDCP78527 4128 aaKnown RBP4.87□□□□□ -1.63
RRP1B-202ENST00000470886 DYNC1H1Q14204 4646 aaKnown RBP4.83□□□□□ -1.64
RRP1B-202ENST00000470886 LRP1BQ9NZR2 4599 aa4.8□□□□□ -1.64
RRP1B-202ENST00000470886 FAT2Q9NYQ8 4349 aa4.79□□□□□ -1.64
RRP1B-202ENST00000470886 LYSTQ99698 3801 aa4.79□□□□□ -1.64
RRP1B-202ENST00000470886 KMT2AQ03164 3969 aa4.78□□□□□ -1.64
RRP1B-202ENST00000470886 VPS13BQ7Z7G8 4022 aa4.71□□□□□ -1.65
RRP1B-202ENST00000470886 FRAS1Q86XX4 4008 aa4.71□□□□□ -1.66
RRP1B-202ENST00000470886 APOBP04114 4563 aaKnown RBP4.65□□□□□ -1.66
RRP1B-202ENST00000470886 PKD1P98161 4303 aa4.64□□□□□ -1.67
RRP1B-202ENST00000470886 PKHD1L1Q86WI1 4243 aa4.63□□□□□ -1.67
RRP1B-202ENST00000470886 FAT1Q14517 4588 aa4.6□□□□□ -1.67
RRP1B-202ENST00000470886 FAT3Q8TDW7 4589 aa4.56□□□□□ -1.68
RRP1B-202ENST00000470886 DNHD1Q96M86 4753 aa4.54□□□□□ -1.68
RRP1B-202ENST00000470886 KRTAP4-5Q9BYR2 181 aa4.53□□□□□ -1.68
RRP1B-202ENST00000470886 LORP23490 312 aaPredicted RBP4.52□□□□□ -1.69
RRP1B-202ENST00000470886 KRTAP10-12P60413 245 aa4.51□□□□□ -1.69
RRP1B-202ENST00000470886 PKHD1P08F94 4074 aa4.51□□□□□ -1.69
RRP1B-202ENST00000470886 HYDINQ4G0P3 5121 aa4.49□□□□□ -1.69
RRP1B-202ENST00000470886 RYR2Q92736 4967 aa4.48□□□□□ -1.69
RRP1B-202ENST00000470886 KRTAP12-3P60328 96 aa4.44□□□□□ -1.7
RRP1B-202ENST00000470886 RYR1P21817 5038 aa4.44□□□□□ -1.7
RRP1B-202ENST00000470886 KRTAP4-1Q9BYQ7 146 aa4.42□□□□□ -1.7
RRP1B-202ENST00000470886 TNXBP22105 4242 aa4.42□□□□□ -1.7
RRP1B-202ENST00000470886 LCE3AQ5TA76 89 aa4.42□□□□□ -1.7
RRP1B-202ENST00000470886 MYCBP2O75592 4640 aa4.4□□□□□ -1.71
RRP1B-202ENST00000470886 HSPG2P98160 4391 aa4.38□□□□□ -1.71
RRP1B-202ENST00000470886 LRP1Q07954 4544 aaKnown RBP4.38□□□□□ -1.71
RRP1B-202ENST00000470886 KRTAP17-1Q9BYP8 105 aa4.36□□□□□ -1.71
RRP1B-202ENST00000470886 SPRR2GQ9BYE4 73 aa4.34□□□□□ -1.72
RRP1B-202ENST00000470886 RYR3Q15413 4870 aa4.26□□□□□ -1.73
RRP1B-202ENST00000470886 MT1HP80294 61 aa4.2□□□□□ -1.74
RRP1B-202ENST00000470886 MUC17Q685J3 4493 aa4.19□□□□□ -1.74
RRP1B-202ENST00000470886 KIAA1109Q2LD37 5005 aa4.18□□□□□ -1.74
RRP1B-202ENST00000470886 KRTAP19-2Q3LHN2 52 aa4.17□□□□□ -1.74
RRP1B-202ENST00000470886 KRTAP8-1Q8IUC2 63 aa4.17□□□□□ -1.74
RRP1B-202ENST00000470886 MT2AP02795 61 aa4.17□□□□□ -1.74
RRP1B-202ENST00000470886 KRTAP19-4Q3LI73 84 aa4.14□□□□□ -1.75
RRP1B-202ENST00000470886 HERC1Q15751 4861 aa4.13□□□□□ -1.75
RRP1B-202ENST00000470886 KRTAP19-8Q3LI54 63 aa4.12□□□□□ -1.75
RRP1B-202ENST00000470886 SPRR5A0A1B0GTR4 108 aa4.09□□□□□ -1.75
RRP1B-202ENST00000470886 KRTAP19-1Q8IUB9 90 aa4.09□□□□□ -1.76
RRP1B-202ENST00000470886 MT1FP04733 61 aa4.08□□□□□ -1.76
RRP1B-202ENST00000470886 KMT2CQ8NEZ4 4911 aaKnown RBP4.06□□□□□ -1.76
RRP1B-202ENST00000470886 LRP2P98164 4655 aa4.06□□□□□ -1.76
RRP1B-202ENST00000470886 KRTAP10-5P60370 271 aa4.05□□□□□ -1.76
RRP1B-202ENST00000470886 LCE2CQ5TA81 110 aa4.04□□□□□ -1.76
RRP1B-202ENST00000470886 CRCT1Q9UGL9 99 aa4.03□□□□□ -1.76
RRP1B-202ENST00000470886 LCE3CQ5T5A8 94 aa3.99□□□□□ -1.77
RRP1B-202ENST00000470886 BIRC6Q9NR09 4857 aa3.98□□□□□ -1.77
RRP1B-202ENST00000470886 FLGP20930 4061 aaPredicted RBP3.97□□□□□ -1.77
RRP1B-202ENST00000470886 KRTAP9-8Q9BYQ0 159 aa3.95□□□□□ -1.78
RRP1B-202ENST00000470886 KRTAP19-5Q3LI72 72 aa3.95□□□□□ -1.78
RRP1B-202ENST00000470886 LPAP08519 4548 aa3.94□□□□□ -1.78
RRP1B-202ENST00000470886 HERC2O95714 4834 aa3.93□□□□□ -1.78
RRP1B-202ENST00000470886 MT1BP07438 61 aa3.91□□□□□ -1.78
RRP1B-202ENST00000470886 MT1XP80297 61 aa3.91□□□□□ -1.78
RRP1B-202ENST00000470886 KRTAP10-7P60409 375 aaPredicted RBP3.84□□□□□ -1.79
RRP1B-202ENST00000470886 KRTAP9-3Q9BYQ3 159 aa3.84□□□□□ -1.8
RRP1B-202ENST00000470886 EPPK1P58107 5090 aaKnown RBP3.83□□□□□ -1.8
RRP1B-202ENST00000470886 ABCA13Q86UQ4 5058 aa3.8□□□□□ -1.8
RRP1B-202ENST00000470886 KRTAP12-4P60329 112 aa3.64□□□□□ -1.83
RRP1B-202ENST00000470886 HMCN2Q8NDA2 5059 aa3.62□□□□□ -1.83
RRP1B-202ENST00000470886 PCLOQ9Y6V0 5065 aa3.61□□□□□ -1.83
RRP1B-202ENST00000470886 SPRR2FQ96RM1 72 aa3.61□□□□□ -1.83
RRP1B-202ENST00000470886 LCE2BO14633 110 aa3.58□□□□□ -1.84
RRP1B-202ENST00000470886 MT1GP13640 62 aa3.57□□□□□ -1.84
RRP1B-202ENST00000470886 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
RRP1B-202ENST00000470886 KRTAP4-8A0A0G2JLE6 195 aa3.53□□□□□ -1.84
RRP1B-202ENST00000470886 KRTAP4-8Q9BYQ9 185 aa3.53□□□□□ -1.84
RRP1B-202ENST00000470886 RNF213Q63HN8 5207 aa3.52□□□□□ -1.85
RRP1B-202ENST00000470886 MT1LQ93083 61 aa3.51□□□□□ -1.85
RRP1B-202ENST00000470886 LCE2AQ5TA79 106 aaPredicted RBP3.5□□□□□ -1.85
RRP1B-202ENST00000470886 FAT4Q6V0I7 4981 aa3.49□□□□□ -1.85
RRP1B-202ENST00000470886 MT1EP04732 61 aa3.47□□□□□ -1.85
RRP1B-202ENST00000470886 KRTAP19-6Q3LI70 58 aa3.44□□□□□ -1.86
RRP1B-202ENST00000470886 KRTAP9-2Q9BYQ4 174 aa3.44□□□□□ -1.86
RRP1B-202ENST00000470886 KRTAP19-3Q7Z4W3 81 aa3.43□□□□□ -1.86
RRP1B-202ENST00000470886 KRTAP9-6A0A140TA67 174 aa3.42□□□□□ -1.86
RRP1B-202ENST00000470886 LCE3BQ5TA77 95 aa3.42□□□□□ -1.86
RRP1B-202ENST00000470886 KRTAP19-7Q3SYF9 63 aa3.39□□□□□ -1.87
RRP1B-202ENST00000470886 LCE3DQ9BYE3 92 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms