RNA–Protein interactions for RNA: ENST00000469641.5

ATP13A1-205, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 4,241 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-205ENST00000469641 LRP1BQ9NZR2 4599 aa5.38□□□□□ -1.55
ATP13A1-205ENST00000469641 TPRXLQ17RH7 258 aa5.38□□□□□ -1.55
ATP13A1-205ENST00000469641 VPS13DQ5THJ4 4388 aa5.37□□□□□ -1.55
ATP13A1-205ENST00000469641 KIAA1109Q2LD37 5005 aa5.37□□□□□ -1.55
ATP13A1-205ENST00000469641 DNAH6Q9C0G6 4158 aa5.36□□□□□ -1.55
ATP13A1-205ENST00000469641 HYDINQ4G0P3 5121 aa5.35□□□□□ -1.55
ATP13A1-205ENST00000469641 DNAH3Q8TD57 4116 aa5.34□□□□□ -1.55
ATP13A1-205ENST00000469641 MYCBP2O75592 4640 aa5.32□□□□□ -1.56
ATP13A1-205ENST00000469641 RYR1P21817 5038 aa5.31□□□□□ -1.56
ATP13A1-205ENST00000469641 KRTAP12-2P59991 146 aa5.31□□□□□ -1.56
ATP13A1-205ENST00000469641 KRTAP10-4P60372 401 aaPredicted RBP5.31□□□□□ -1.56
ATP13A1-205ENST00000469641 DYNC1H1Q14204 4646 aaKnown RBP5.3□□□□□ -1.56
ATP13A1-205ENST00000469641 DNAH17Q9UFH2 4485 aa5.28□□□□□ -1.56
ATP13A1-205ENST00000469641 DNAH2Q9P225 4427 aa5.28□□□□□ -1.56
ATP13A1-205ENST00000469641 MT1HL1P0DM35 61 aa5.28□□□□□ -1.56
ATP13A1-205ENST00000469641 TNP1P09430 55 aa5.27□□□□□ -1.57
ATP13A1-205ENST00000469641 RYR3Q15413 4870 aa5.26□□□□□ -1.57
ATP13A1-205ENST00000469641 PKHD1P08F94 4074 aa5.25□□□□□ -1.57
ATP13A1-205ENST00000469641 VPS13BQ7Z7G8 4022 aa5.24□□□□□ -1.57
ATP13A1-205ENST00000469641 KRTAP13-4Q3LI77 160 aa5.24□□□□□ -1.57
ATP13A1-205ENST00000469641 FAT3Q8TDW7 4589 aa5.24□□□□□ -1.57
ATP13A1-205ENST00000469641 PP632Q6XCG6 107 aa5.23□□□□□ -1.57
ATP13A1-205ENST00000469641 KMT2CQ8NEZ4 4911 aaKnown RBP5.22□□□□□ -1.57
ATP13A1-205ENST00000469641 KRTAP12-1P59990 96 aa5.21□□□□□ -1.58
ATP13A1-205ENST00000469641 KRTAP10-6P60371 365 aaPredicted RBP5.2□□□□□ -1.58
ATP13A1-205ENST00000469641 HECTD4Q9Y4D8 3996 aa5.2□□□□□ -1.58
ATP13A1-205ENST00000469641 LRP1Q07954 4544 aaKnown RBP5.18□□□□□ -1.58
ATP13A1-205ENST00000469641 DYNC2H1Q8NCM8 4307 aaKnown RBP5.17□□□□□ -1.58
ATP13A1-205ENST00000469641 SACSQ9NZJ4 4579 aa5.15□□□□□ -1.59
ATP13A1-205ENST00000469641 KRTAP3-3Q9BYR6 98 aa5.12□□□□□ -1.59
ATP13A1-205ENST00000469641 APOBP04114 4563 aaKnown RBP5.12□□□□□ -1.59
ATP13A1-205ENST00000469641 ALMS1Q8TCU4 4167 aa5.11□□□□□ -1.59
ATP13A1-205ENST00000469641 KRTAP17-1Q9BYP8 105 aa5.1□□□□□ -1.59
ATP13A1-205ENST00000469641 KRTAP3-2Q9BYR7 98 aa5.1□□□□□ -1.59
ATP13A1-205ENST00000469641 KRTAP10-10P60014 251 aa5.09□□□□□ -1.59
ATP13A1-205ENST00000469641 KRTAP15-1Q3LI76 137 aa5.09□□□□□ -1.59
ATP13A1-205ENST00000469641 FAT2Q9NYQ8 4349 aa5.04□□□□□ -1.6
ATP13A1-205ENST00000469641 HERC2O95714 4834 aa5.04□□□□□ -1.6
ATP13A1-205ENST00000469641 RYR2Q92736 4967 aa5.02□□□□□ -1.61
ATP13A1-205ENST00000469641 EPPK1P58107 5090 aaKnown RBP4.96□□□□□ -1.61
ATP13A1-205ENST00000469641 LRP2P98164 4655 aa4.94□□□□□ -1.62
ATP13A1-205ENST00000469641 PCLOQ9Y6V0 5065 aa4.93□□□□□ -1.62
ATP13A1-205ENST00000469641 BIRC6Q9NR09 4857 aa4.91□□□□□ -1.62
ATP13A1-205ENST00000469641 PKD1P98161 4303 aa4.88□□□□□ -1.63
ATP13A1-205ENST00000469641 KRTAP4-1Q9BYQ7 146 aa4.85□□□□□ -1.63
ATP13A1-205ENST00000469641 HSPG2P98160 4391 aa4.82□□□□□ -1.64
ATP13A1-205ENST00000469641 LPAP08519 4548 aa4.77□□□□□ -1.65
ATP13A1-205ENST00000469641 LORP23490 312 aaPredicted RBP4.77□□□□□ -1.65
ATP13A1-205ENST00000469641 ABCA13Q86UQ4 5058 aa4.76□□□□□ -1.65
ATP13A1-205ENST00000469641 PRO2289Q9P1D8 64 aa4.73□□□□□ -1.65
ATP13A1-205ENST00000469641 HERC1Q15751 4861 aa4.69□□□□□ -1.66
ATP13A1-205ENST00000469641 MUC2Q02817 5179 aa4.69□□□□□ -1.66
ATP13A1-205ENST00000469641 FSIP2Q5CZC0 6907 aa4.68□□□□□ -1.66
ATP13A1-205ENST00000469641 RNF213Q63HN8 5207 aa4.62□□□□□ -1.67
ATP13A1-205ENST00000469641 PKHD1L1Q86WI1 4243 aa4.61□□□□□ -1.67
ATP13A1-205ENST00000469641 UBR4Q5T4S7 5183 aa4.58□□□□□ -1.68
ATP13A1-205ENST00000469641 INE1O15225 51 aa4.55□□□□□ -1.68
ATP13A1-205ENST00000469641 TNXBP22105 4242 aa4.53□□□□□ -1.68
ATP13A1-205ENST00000469641 MT1HP80294 61 aa4.5□□□□□ -1.69
ATP13A1-205ENST00000469641 FAT4Q6V0I7 4981 aa4.49□□□□□ -1.69
ATP13A1-205ENST00000469641 LCE3AQ5TA76 89 aa4.45□□□□□ -1.7
ATP13A1-205ENST00000469641 KRTAP23-1A1A580 65 aa4.44□□□□□ -1.7
ATP13A1-205ENST00000469641 MT2AP02795 61 aa4.41□□□□□ -1.7
ATP13A1-205ENST00000469641 MT1FP04733 61 aa4.4□□□□□ -1.71
ATP13A1-205ENST00000469641 KRTAP10-12P60413 245 aa4.39□□□□□ -1.71
ATP13A1-205ENST00000469641 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
ATP13A1-205ENST00000469641 LCE2CQ5TA81 110 aa4.28□□□□□ -1.72
ATP13A1-205ENST00000469641 HMCN2Q8NDA2 5059 aa4.25□□□□□ -1.73
ATP13A1-205ENST00000469641 SPRR2GQ9BYE4 73 aa4.23□□□□□ -1.73
ATP13A1-205ENST00000469641 KRTAP19-1Q8IUB9 90 aa4.22□□□□□ -1.73
ATP13A1-205ENST00000469641 KRTAP19-2Q3LHN2 52 aa4.19□□□□□ -1.74
ATP13A1-205ENST00000469641 CRCT1Q9UGL9 99 aa4.19□□□□□ -1.74
ATP13A1-205ENST00000469641 KRTAP9-8Q9BYQ0 159 aa4.17□□□□□ -1.74
ATP13A1-205ENST00000469641 MUC17Q685J3 4493 aa4.16□□□□□ -1.74
ATP13A1-205ENST00000469641 SPRR5A0A1B0GTR4 108 aa4.13□□□□□ -1.75
ATP13A1-205ENST00000469641 FLGP20930 4061 aaPredicted RBP4.12□□□□□ -1.75
ATP13A1-205ENST00000469641 KRTAP8-1Q8IUC2 63 aa4.09□□□□□ -1.76
ATP13A1-205ENST00000469641 USH2AO75445 5202 aa4.07□□□□□ -1.76
ATP13A1-205ENST00000469641 KRTAP10-7P60409 375 aaPredicted RBP4.04□□□□□ -1.76
ATP13A1-205ENST00000469641 MT1BP07438 61 aa4.04□□□□□ -1.76
ATP13A1-205ENST00000469641 KRTAP9-3Q9BYQ3 159 aa4.01□□□□□ -1.77
ATP13A1-205ENST00000469641 KRTAP10-5P60370 271 aa4□□□□□ -1.77
ATP13A1-205ENST00000469641 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
ATP13A1-205ENST00000469641 KRTAP4-8A0A0G2JLE6 195 aa3.99□□□□□ -1.77
ATP13A1-205ENST00000469641 KRTAP4-8Q9BYQ9 185 aa3.99□□□□□ -1.77
ATP13A1-205ENST00000469641 KRTAP19-8Q3LI54 63 aa3.99□□□□□ -1.77
ATP13A1-205ENST00000469641 MT1XP80297 61 aa3.98□□□□□ -1.77
ATP13A1-205ENST00000469641 LCE2BO14633 110 aa3.98□□□□□ -1.77
ATP13A1-205ENST00000469641 KRTAP9-2Q9BYQ4 174 aa3.98□□□□□ -1.77
ATP13A1-205ENST00000469641 KRTAP19-5Q3LI72 72 aa3.95□□□□□ -1.78
ATP13A1-205ENST00000469641 SPRR2FQ96RM1 72 aa3.92□□□□□ -1.78
ATP13A1-205ENST00000469641 LCE3CQ5T5A8 94 aa3.9□□□□□ -1.78
ATP13A1-205ENST00000469641 KMT2DO14686 5537 aa3.89□□□□□ -1.79
ATP13A1-205ENST00000469641 LCE2AQ5TA79 106 aaPredicted RBP3.89□□□□□ -1.79
ATP13A1-205ENST00000469641 SYNE1Q8NF91 8797 aaKnown RBP3.87□□□□□ -1.79
ATP13A1-205ENST00000469641 DSTQ03001 7570 aaKnown RBP3.84□□□□□ -1.79
ATP13A1-205ENST00000469641 SYNE2Q8WXH0 6885 aaKnown RBP3.78□□□□□ -1.8
ATP13A1-205ENST00000469641 KRTAP9-6A0A140TA67 174 aa3.74□□□□□ -1.81
ATP13A1-205ENST00000469641 KRTAP4-7Q9BYR0 210 aa3.73□□□□□ -1.81
ATP13A1-205ENST00000469641 FCGBPQ9Y6R7 5405 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 712 ms