RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 DNHD1Q96M86 4753 aa-1.04□□□□□ -2.58
VCL-203ENST00000461383 C5orf42Q9H799 3197 aa-1.04□□□□□ -2.58
VCL-203ENST00000461383 MAST1Q9Y2H9 1570 aa-1.04□□□□□ -2.58
VCL-203ENST00000461383 EFCAB5A4FU69 1503 aa-1.05□□□□□ -2.58
VCL-203ENST00000461383 SMR3BP02814 79 aaPredicted RBP-1.05□□□□□ -2.58
VCL-203ENST00000461383 TMEM167BQ9NRX6 74 aa-1.05□□□□□ -2.58
VCL-203ENST00000461383 SPTAN1Q13813 2472 aaKnown RBP-1.05□□□□□ -2.58
VCL-203ENST00000461383 ABCA6Q8N139 1617 aa-1.05□□□□□ -2.58
VCL-203ENST00000461383 HYDINQ4G0P3 5121 aa-1.05□□□□□ -2.58
VCL-203ENST00000461383 GLI2P10070 1586 aa-1.05□□□□□ -2.58
VCL-203ENST00000461383 DNAH7Q8WXX0 4024 aa-1.05□□□□□ -2.58
VCL-203ENST00000461383 ALS2Q96Q42 1657 aa-1.06□□□□□ -2.58
VCL-203ENST00000461383 DYNC1H1Q14204 4646 aaKnown RBP-1.06□□□□□ -2.58
VCL-203ENST00000461383 KRTAP8-1Q8IUC2 63 aa-1.06□□□□□ -2.58
VCL-203ENST00000461383 LAMA2P24043 3122 aaKnown RBP-1.06□□□□□ -2.58
VCL-203ENST00000461383 CCDC180Q9P1Z9 1646 aa-1.07□□□□□ -2.58
VCL-203ENST00000461383 COL6A5A8TX70 2615 aa-1.07□□□□□ -2.58
VCL-203ENST00000461383 M0QZ58 72 aa-1.07□□□□□ -2.58
VCL-203ENST00000461383 KAAG1Q9UBP8 84 aa-1.07□□□□□ -2.58
VCL-203ENST00000461383 LINC00308Q8TCZ7 52 aa-1.08□□□□□ -2.58
VCL-203ENST00000461383 FAM208AQ9UK61 1670 aaKnown RBP-1.09□□□□□ -2.58
VCL-203ENST00000461383 ITPR1Q14643 2758 aa-1.09□□□□□ -2.58
VCL-203ENST00000461383 A8MTW9 85 aa-1.09□□□□□ -2.58
VCL-203ENST00000461383 EEA1Q15075 1411 aa-1.09□□□□□ -2.58
VCL-203ENST00000461383 SMIM27A0A1W2PRY6 76 aa-1.1□□□□□ -2.59
VCL-203ENST00000461383 RNF213Q63HN8 5207 aa-1.12□□□□□ -2.59
VCL-203ENST00000461383 A0A087WWC5 75 aa-1.13□□□□□ -2.59
VCL-203ENST00000461383 DNAH17Q9UFH2 4485 aa-1.13□□□□□ -2.59
VCL-203ENST00000461383 MYO9AB2RTY4 2548 aa-1.14□□□□□ -2.59
VCL-203ENST00000461383 LRBAP50851 2863 aa-1.14□□□□□ -2.59
VCL-203ENST00000461383 PREX2Q70Z35 1606 aa-1.15□□□□□ -2.59
VCL-203ENST00000461383 ADGRG4Q8IZF6 3080 aa-1.15□□□□□ -2.59
VCL-203ENST00000461383 IGIPA6NJ69 53 aa-1.15□□□□□ -2.59
VCL-203ENST00000461383 MT1XP80297 61 aa-1.15□□□□□ -2.59
VCL-203ENST00000461383 WFDC10BQ8IUB3 73 aa-1.16□□□□□ -2.6
VCL-203ENST00000461383 EFCAB6Q5THR3 1501 aa-1.16□□□□□ -2.6
VCL-203ENST00000461383 LINC01546A6NGU7 62 aa-1.17□□□□□ -2.6
VCL-203ENST00000461383 DNAH10Q8IVF4 4471 aa-1.18□□□□□ -2.6
VCL-203ENST00000461383 SPART-AS1P0CW21 52 aa-1.18□□□□□ -2.6
VCL-203ENST00000461383 H0YGX0 51 aa-1.19□□□□□ -2.6
VCL-203ENST00000461383 S100ZQ8WXG8 99 aa-1.19□□□□□ -2.6
VCL-203ENST00000461383 UGGT1Q9NYU2 1555 aa-1.19□□□□□ -2.6
VCL-203ENST00000461383 RYR3Q15413 4870 aa-1.2□□□□□ -2.6
VCL-203ENST00000461383 ABCA10Q8WWZ4 1543 aa-1.2□□□□□ -2.6
VCL-203ENST00000461383 MT1EP04732 61 aa-1.2□□□□□ -2.6
VCL-203ENST00000461383 CSMD1Q96PZ7 3565 aa-1.21□□□□□ -2.6
VCL-203ENST00000461383 SMIM5Q71RC9 77 aa-1.21□□□□□ -2.6
VCL-203ENST00000461383 CPS1P31327 1500 aa-1.22□□□□□ -2.6
VCL-203ENST00000461383 KIF21BO75037 1637 aa-1.22□□□□□ -2.61
VCL-203ENST00000461383 MGAQ8IWI9 3026 aa-1.23□□□□□ -2.61
VCL-203ENST00000461383 CHD7Q9P2D1 2997 aa-1.23□□□□□ -2.61
VCL-203ENST00000461383 RYR2Q92736 4967 aa-1.24□□□□□ -2.61
VCL-203ENST00000461383 MT1LQ93083 61 aa-1.25□□□□□ -2.61
VCL-203ENST00000461383 KIAA1109Q2LD37 5005 aa-1.25□□□□□ -2.61
VCL-203ENST00000461383 LMO7Q8WWI1 1683 aa-1.26□□□□□ -2.61
VCL-203ENST00000461383 TRRAPQ9Y4A5 3859 aa-1.27□□□□□ -2.61
VCL-203ENST00000461383 CFAP46Q8IYW2 2715 aa-1.3□□□□□ -2.62
VCL-203ENST00000461383 EYSQ5T1H1 3165 aa-1.3□□□□□ -2.62
VCL-203ENST00000461383 DNAH5Q8TE73 4624 aa-1.31□□□□□ -2.62
VCL-203ENST00000461383 PRXQ9BXM0 1461 aa-1.31□□□□□ -2.62
VCL-203ENST00000461383 PLNP26678 52 aa-1.32□□□□□ -2.62
VCL-203ENST00000461383 DEFB131AP59861 70 aa-1.32□□□□□ -2.62
VCL-203ENST00000461383 CEP295Q9C0D2 2601 aa-1.32□□□□□ -2.62
VCL-203ENST00000461383 MT1HL1P0DM35 61 aa-1.33□□□□□ -2.62
VCL-203ENST00000461383 AGLP35573 1532 aa-1.35□□□□□ -2.63
VCL-203ENST00000461383 SYCP2Q9BX26 1530 aa-1.35□□□□□ -2.63
VCL-203ENST00000461383 ZFHX4Q86UP3 3567 aa-1.37□□□□□ -2.63
VCL-203ENST00000461383 SMIM31A0A1B0GVY4 71 aa-1.37□□□□□ -2.63
VCL-203ENST00000461383 POLR2KP53803 58 aaKnown RBP-1.37□□□□□ -2.63
VCL-203ENST00000461383 TFF3Q07654 80 aa-1.37□□□□□ -2.63
VCL-203ENST00000461383 ABCA5Q8WWZ7 1642 aa-1.37□□□□□ -2.63
VCL-203ENST00000461383 DDX60Q8IY21 1712 aaKnown RBP-1.37□□□□□ -2.63
VCL-203ENST00000461383 MROH2AA6NES4 1674 aa-1.38□□□□□ -2.63
VCL-203ENST00000461383 SMG1Q96Q15 3661 aaKnown RBP-1.39□□□□□ -2.63
VCL-203ENST00000461383 CSMD2Q7Z408 3487 aa-1.4□□□□□ -2.63
VCL-203ENST00000461383 MT1GP13640 62 aa-1.42□□□□□ -2.64
VCL-203ENST00000461383 SMIM2Q9BVW6 85 aa-1.43□□□□□ -2.64
VCL-203ENST00000461383 ADCY10Q96PN6 1610 aa-1.44□□□□□ -2.64
VCL-203ENST00000461383 LEAP2Q969E1 77 aa-1.44□□□□□ -2.64
VCL-203ENST00000461383 TLN1Q9Y490 2541 aaKnown RBP-1.45□□□□□ -2.64
VCL-203ENST00000461383 ITPR2Q14571 2701 aa-1.46□□□□□ -2.64
VCL-203ENST00000461383 DEFB4AO15263 64 aa-1.48□□□□□ -2.65
VCL-203ENST00000461383 CMC2Q9NRP2 79 aa-1.48□□□□□ -2.65
VCL-203ENST00000461383 ABCC8Q09428 1581 aa-1.48□□□□□ -2.65
VCL-203ENST00000461383 IQGAP1P46940 1657 aa-1.48□□□□□ -2.65
VCL-203ENST00000461383 MT1MQ8N339 61 aa-1.49□□□□□ -2.65
VCL-203ENST00000461383 NRXN3Q9Y4C0 1643 aa-1.49□□□□□ -2.65
VCL-203ENST00000461383 CLTCL1P53675 1640 aa-1.5□□□□□ -2.65
VCL-203ENST00000461383 MT2AP02795 61 aa-1.5□□□□□ -2.65
VCL-203ENST00000461383 DMXL2Q8TDJ6 3036 aa-1.52□□□□□ -2.65
VCL-203ENST00000461383 DEFB136Q30KP8 78 aa-1.52□□□□□ -2.65
VCL-203ENST00000461383 TRPM2O94759 1503 aa-1.56□□□□□ -2.66
VCL-203ENST00000461383 ERICH3Q5RHP9 1530 aa-1.56□□□□□ -2.66
VCL-203ENST00000461383 CRYBG3Q68DQ2 2970 aa-1.56□□□□□ -2.66
VCL-203ENST00000461383 FANCD2Q9BXW9 1451 aa-1.56□□□□□ -2.66
VCL-203ENST00000461383 ATMQ13315 3056 aa-1.58□□□□□ -2.66
VCL-203ENST00000461383 NFAT5O94916 1531 aa-1.59□□□□□ -2.66
VCL-203ENST00000461383 PRUNE2Q8WUY3 3088 aa-1.6□□□□□ -2.67
VCL-203ENST00000461383 CFAP54Q96N23 3096 aa-1.61□□□□□ -2.67
VCL-203ENST00000461383 NDUFA1O15239 70 aa-1.63□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms